Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g07355 Nelumbo nucifera HOM05D005487 ORTHO05D007280 8.7e-259 896.3 421 100.0
TAR724G0004 Trochodendron aralioides HOM05D005487 ORTHO05D007280 1.9e-237 825.5 421 90.0
Nn1g03329 Nelumbo nucifera HOM05D005487 ORTHO05D007280 3.0e-235 818.1 421 90.3
TAR629G3393 Trochodendron aralioides HOM05D005487 ORTHO05D007280 9.7e-234 813.1 421 88.1
QL05p069756 Quercus lobata HOM05D005487 ORTHO05D007280 5.5e-229 797.3 420 87.1
CSS0007892 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 3.9e-227 791.2 421 86.0
Cfa000109 Carpinus fangiana HOM05D005487 ORTHO05D007280 9.7e-226 786.6 418 85.6
CiPaw.10G077700 Carya illinoinensis HOM05D005487 ORTHO05D007280 9.1e-224 780.0 418 84.2
Actinidia26862 Actinidia chinensis HOM05D005487 ORTHO05D007280 2.0e-223 778.9 418 84.0
Oeu044422.1 Olea europaea HOM05D005487 ORTHO05D007280 2.6e-223 778.5 419 84.7
MBI19_g29429_MAGBIO Magnolia biondii HOM05D005487 ORTHO05D007280 7.7e-223 776.9 418 85.4
Hma1.2p1_0135F.1_g061730 Hydrangea macrophylla HOM05D005487 ORTHO05D007280 3.8e-222 774.6 419 85.0
Manes.09G070300 Manihot esculenta HOM05D005487 ORTHO05D007280 5.0e-222 774.2 418 84.9
Actinidia11881 Actinidia chinensis HOM05D005487 ORTHO05D007280 8.5e-222 773.5 418 85.2
Duzib192G1033 Durio zibethinus HOM05D005487 ORTHO05D007280 1.4e-221 772.7 417 84.4
FvH4_3g01030 Fragaria vesca HOM05D005487 ORTHO05D007280 9.4e-221 770.0 419 84.0
Atru.chr1.2460 Acer truncatum HOM05D005487 ORTHO05D007280 2.7e-220 768.5 419 84.2
TWI38G0871 Tripterygium wilfordii HOM05D005487 ORTHO05D007280 2.7e-220 768.5 419 84.0
Thecc.06G232800 Theobroma cacao HOM05D005487 ORTHO05D007280 3.6e-220 768.1 418 83.3
Nitab4.5_0000143g0260 Nicotiana tabacum HOM05D005487 ORTHO05D007280 4.7e-220 767.7 419 83.8
MD10G1331100 Malus domestica HOM05D005487 ORTHO05D007280 7.9e-220 766.9 419 84.7
GSVIVG01003351001 Vitis vinifera HOM05D005487 ORTHO05D007280 7.9e-220 766.9 418 83.7
PSO764G0115 Papaver somniferum HOM05D005487 ORTHO05D007280 1.0e-219 766.5 418 84.4
PGR004G0814 Punica granatum HOM05D005487 ORTHO05D007280 1.0e-219 766.5 419 82.8
Rhsim13G0146300 Rhododendron simsii HOM05D005487 ORTHO05D007280 3.0e-219 765.0 448 79.0
Nitab4.5_0001198g0060 Nicotiana tabacum HOM05D005487 ORTHO05D007280 1.1e-218 763.1 419 83.8
Cpa.g.sc75.119 Carica papaya HOM05D005487 ORTHO05D007280 1.5e-218 762.7 417 82.7
RhsimUnG0109400 Rhododendron simsii HOM05D005487 ORTHO05D007280 1.5e-218 762.7 448 79.0
FAN21G2054 Fragaria x ananassa HOM05D005487 ORTHO05D007280 2.0e-218 762.3 419 83.5
Potri.006G009200 Populus trichocarpa HOM05D005487 ORTHO05D007280 5.7e-218 760.8 419 82.6
Ciclev10015367m.g Citrus clementina HOM05D005487 ORTHO05D007280 9.7e-218 760.0 418 82.8
PSO210G3736 Papaver somniferum HOM05D005487 ORTHO05D007280 9.7e-218 760.0 417 83.5
RcHm_v2.0_Chr5g0001571 Rosa chinensis HOM05D005487 ORTHO05D007280 1.3e-217 759.6 417 83.2
Dinv07399 Davidia involucrata HOM05D005487 ORTHO05D007280 1.7e-217 759.2 400 87.2
Lj2C262G3 Lonicera japonica HOM05D005487 ORTHO05D007280 3.7e-217 758.1 413 84.7
Prupe.4G011100 Prunus persica HOM05D005487 ORTHO05D007280 4.8e-217 757.7 419 82.6
Cc09_g00910 Coffea canephora HOM05D005487 ORTHO05D007280 1.1e-216 756.5 418 82.5
CANSAT56G2574 Cannabis sativa HOM05D005487 ORTHO05D007280 2.4e-216 755.4 417 82.3
Solyc11g012160.2 Solanum lycopersicum HOM05D005487 ORTHO05D007280 2.2e-214 748.8 421 80.5
EL10Ac8g20177 Beta vulgaris HOM05D005487 ORTHO05D007280 8.5e-214 746.9 419 80.7
Lalb_Chr15g0087971 Lupinus albus HOM05D005487 ORTHO05D007280 8.5e-214 746.9 417 81.1
Sed0025030 Sechium edule HOM05D005487 ORTHO05D007280 8.5e-214 746.9 421 80.5
MSTRG.16025 Avicennia marina HOM05D005487 ORTHO05D007280 2.5e-213 745.3 419 81.1
Sopen11g006950 Solanum pennellii HOM05D005487 ORTHO05D007280 2.5e-213 745.3 421 80.5
Gorai.010G250300 Gossypium raimondii HOM05D005487 ORTHO05D007280 4.2e-213 744.6 417 82.0
CAN.G1186.29 Capsicum annuum HOM05D005487 ORTHO05D007280 5.5e-213 744.2 422 82.0
Gohir.A06G205600 Gossypium hirsutum HOM05D005487 ORTHO05D007280 5.5e-213 744.2 417 82.0
HanXRQChr10g0284101 Helianthus annuus HOM05D005487 ORTHO05D007280 5.5e-213 744.2 420 81.4
arahy.Tifrunner.gnm1.ann1.8PBE23 Arachis hypogaea HOM05D005487 ORTHO05D007280 1.2e-212 743.0 418 79.4
Gohir.D06G215900 Gossypium hirsutum HOM05D005487 ORTHO05D007280 2.1e-212 742.3 417 81.8
Gohir.A05G174500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 3.6e-212 741.5 417 81.5
arahy.Tifrunner.gnm1.ann1.61KG5W Arachis hypogaea HOM05D005487 ORTHO05D007280 6.1e-212 740.7 418 79.2
Peaxi162Scf00558g00518 Petunia axillaris HOM05D005487 ORTHO05D007280 6.1e-212 740.7 459 76.0
Gorai.009G182900 Gossypium raimondii HOM05D005487 ORTHO05D007280 8.0e-212 740.3 417 81.5
ATR1101G021 Amborella trichopoda HOM05D005487 ORTHO05D007280 1.8e-211 739.2 422 81.0
COL.COLO4_31878 Corchorus olitorius HOM05D005487 ORTHO05D007280 1.8e-211 739.2 422 79.9
Eucgr.L00543 Eucalyptus grandis HOM05D005487 ORTHO05D007280 1.8e-211 739.2 452 76.5
AL1G23300 Arabidopsis lyrata HOM05D005487 ORTHO05D007280 6.7e-211 737.3 417 78.9
Sp1g10720 Schrenkiella parvula HOM05D005487 ORTHO05D007280 4.4e-210 734.6 416 78.6
THA.LOC104809472 Tarenaya hassleriana HOM05D005487 ORTHO05D007280 4.4e-210 734.6 416 80.5
AT1G12050 Arabidopsis thaliana HOM05D005487 ORTHO05D007280 5.7e-210 734.2 417 79.1
Gohir.D05G177500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 7.5e-210 733.8 417 80.8
Psat1g176520 Pisum sativum HOM05D005487 ORTHO05D007280 7.5e-210 733.8 416 78.6
Aqoxy1G04106 Aquilegia oxysepala HOM05D005487 ORTHO05D007280 1.3e-209 733.0 422 80.1
Carub.0001s1173 Capsella rubella HOM05D005487 ORTHO05D007280 1.3e-209 733.0 416 78.8
Ca_00719_v3 Cicer arietinum L. HOM05D005487 ORTHO05D007280 1.3e-209 733.0 415 79.8
CARHR012410 Cardamine hirsuta HOM05D005487 ORTHO05D007280 1.7e-209 732.6 416 78.4
Glyma.15G114300 Glycine max HOM05D005487 ORTHO05D007280 1.7e-209 732.6 416 78.4
Phvul.006G143500 Phaseolus vulgaris HOM05D005487 ORTHO05D007280 1.7e-209 732.6 416 78.6
SalBow8G2024 Salvia bowleyana HOM05D005487 ORTHO05D007280 2.8e-209 731.9 418 80.1
AUR62021869 Chenopodium quinoa HOM05D005487 ORTHO05D007280 3.7e-209 731.5 419 80.4
Thhalv10007724m.g Eutrema salsugineum HOM05D005487 ORTHO05D007280 3.7e-209 731.5 416 78.8
VMungo0540G1792 Vigna mungo HOM05D005487 ORTHO05D007280 6.3e-209 730.7 416 78.6
BcaB02g06431 Brassica carinata HOM05D005487 ORTHO05D007280 1.1e-208 729.9 417 78.2
Lj6g0015557 Lotus japonicus HOM05D005487 ORTHO05D007280 1.1e-208 729.9 415 79.0
Medtr2g025640 Medicago truncatula HOM05D005487 ORTHO05D007280 1.8e-208 729.2 415 77.8
BolC5t29858H Brassica oleracea HOM05D005487 ORTHO05D007280 2.4e-208 728.8 416 78.1
Glyma.09G010000 Glycine max HOM05D005487 ORTHO05D007280 3.1e-208 728.4 416 78.4
Lsat_1_v5_gn_8_64401 Lactuca sativa HOM05D005487 ORTHO05D007280 4.1e-208 728.0 426 80.3
ClCG01G021500 Citrullus lanatus HOM05D005487 ORTHO05D007280 5.3e-208 727.6 420 80.0
TPR.G13057 Trifolium pratense HOM05D005487 ORTHO05D007280 5.3e-208 727.6 416 78.1
MELO3C007433.2 Cucumis melo HOM05D005487 ORTHO05D007280 8.5e-206 720.3 420 78.6
vmacro03645 Vaccinium macrocarpon HOM05D005487 ORTHO05D007280 1.5e-205 719.5 404 82.4
CsaV3_6G048520 Cucumis sativus L. HOM05D005487 ORTHO05D007280 1.9e-205 719.2 419 78.5
PGSC0003DMG400013273 Solanum tuberosum HOM05D005487 ORTHO05D007280 2.5e-205 718.8 504 68.3
FAN25G0861 Fragaria x ananassa HOM05D005487 ORTHO05D007280 5.5e-205 717.6 397 83.1
Sopen04g006840 Solanum pennellii HOM05D005487 ORTHO05D007280 5.5e-205 717.6 419 78.0
CAN.G1263.14 Capsicum annuum HOM05D005487 ORTHO05D007280 9.4e-205 716.8 420 77.6
PGSC0003DMG400023608 Solanum tuberosum HOM05D005487 ORTHO05D007280 6.1e-204 714.1 419 77.6
Aa31LG1G2680 Aethionema arabicum HOM05D005487 ORTHO05D007280 1.8e-203 712.6 416 76.9
HPP92_003014 Vanilla planifolia HOM05D005487 ORTHO05D007280 3.4e-202 708.4 425 75.3
HPP92_027542 Vanilla planifolia HOM05D005487 ORTHO05D007280 4.8e-201 704.5 426 75.1
Peaxi162Scf00442g00414 Petunia axillaris HOM05D005487 ORTHO05D007280 8.3e-201 703.7 456 71.3
Haze_06922 Corylus avellana HOM05D005487 ORTHO05D007280 1.8e-200 702.6 432 76.6
BcaC05g25225 Brassica carinata HOM05D005487 ORTHO05D007280 3.1e-200 701.8 402 78.4
Solyc04g014730.4 Solanum lycopersicum HOM05D005487 ORTHO05D007280 5.4e-200 701.0 412 77.2
CDE07G0927 Ceratophyllum demersum HOM05D005487 ORTHO05D007280 7.0e-200 700.7 432 75.0
C05p11110 Brassica napus HOM05D005487 ORTHO05D007280 1.6e-199 699.5 402 78.1
SGA_v2.0_scaffold7G03757 Striga asiatica HOM05D005487 ORTHO05D007280 2.0e-199 699.1 428 76.4
BraA06t24129Z Brassica rapa HOM05D005487 ORTHO05D007280 4.5e-199 698.0 401 78.3
A06p09440 Brassica napus HOM05D005487 ORTHO05D007280 2.3e-198 695.7 401 78.1
Hund23409 Selenicereus undatus HOM05D005487 ORTHO05D007280 2.3e-198 695.7 395 80.3
Haze_06917 Corylus avellana HOM05D005487 ORTHO05D007280 1.1e-197 693.3 456 72.4
Os02g0196800 Oryza sativa ssp. japonica HOM05D005487 ORTHO05D007280 1.3e-193 679.9 420 71.7
Zm00001eb236160 Zea mays HOM05D005487 ORTHO05D007280 1.1e-192 676.8 418 71.5
unitig_0.g999 Utricularia gibba HOM05D005487 ORTHO05D007280 1.0e-190 670.2 404 75.5
DCAR_027826 Daucus carota HOM05D005487 ORTHO05D007280 1.7e-185 652.9 418 73.2
Sabra06G0007000 Salix brachista HOM05D005487 ORTHO05D007280 1.1e-184 650.2 417 74.1
AUR62012785 Chenopodium quinoa HOM05D005487 ORTHO05D007280 1.8e-179 632.9 401 74.6
Duzib235G0086 Durio zibethinus HOM05D005487 ORTHO05D007280 7.8e-175 617.5 378 76.7
Migut.M01391 Erythranthe guttata HOM05D005487 ORTHO05D007280 1.7e-169 599.7 421 68.2
Pp3c4_7990 Physcomitrium patens HOM05D005487 ORTHO05D007280 2.9e-169 599.0 419 66.8
Mapoly0022s0035 Marchantia polymorpha HOM05D005487 ORTHO05D007280 2.1e-167 592.8 416 63.9
SMO137G0224 Selaginella moellendorffii HOM05D005487 ORTHO05D007280 2.1e-167 592.8 417 67.4
CSS0007230 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 2.5e-165 585.9 440 67.3
Zm00001eb205930 Zea mays HOM05D005487 ORTHO05D007280 6.8e-163 577.8 364 71.4
AagrBONN_evm.TU.Sc2ySwM_344.3343 Anthoceros agrestis HOM05D005487 ORTHO05D007280 1.5e-162 576.6 418 63.9
Sc17g0007720 Simmondsia chinensis HOM05D005487 ORTHO05D007280 2.7e-159 565.8 300 84.0
Ah.09g234260 Amaranthus hybridus HOM05D005487 ORTHO05D007280 2.3e-158 562.8 421 65.6
Pp3c13_16620 Physcomitrium patens HOM05D005487 ORTHO05D007280 9.6e-149 530.8 358 68.7
Haze_26411 Corylus avellana HOM05D005487 ORTHO05D007280 3.3e-141 505.8 424 55.2
ECA236G3803 Erigeron canadensis HOM05D005487 ORTHO05D007280 2.1e-135 486.5 271 81.9
RcHm_v2.0_Chr3g0484131 Rosa chinensis HOM05D005487 ORTHO05D007280 1.1e-133 480.7 465 55.7
RcHm_v2.0_Chr3g0477951 Rosa chinensis HOM05D005487 ORTHO05D007280 2.5e-133 479.6 471 55.2
CBR_g46703 Chara braunii HOM05D005487 ORTHO05D007280 6.5e-129 464.9 471 50.1
Cre17.g732802 Chlamydomonas reinhardtii HOM05D005487 ORTHO05D007280 9.0e-123 444.5 469 47.5
PRCOL_00001448 Prasinoderma coloniale HOM05D005487 ORTHO05D007280 2.5e-112 409.8 424 50.2
Gorai.001G209700 Gossypium raimondii HOM05D005487 ORTHO05D007280 1.3e-49 201.4 115 77.4
SEGI_36702 Sequoiadendron giganteum HOM05D005487 ORTHO05D007280 4.6e-34 149.8 92 75.0
RcHm_v2.0_Chr5g0003621 Rosa chinensis HOM05D005487 ORTHO05D007280 1.1e-32 145.2 82 82.9
Gohir.D07G188750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 3.3e-32 143.7 115 60.0
C06p15210 Brassica napus HOM05D005487 ORTHO05D042797 3.4e-29 133.7 89 66.3
BolC6t36696H Brassica oleracea HOM05D005487 ORTHO05D042797 3.4e-29 133.7 89 66.3
COL.COLO4_27266 Corchorus olitorius HOM05D000025 ORTHO05D000040 8.4e-20 102.4 136 42.6
BcaC08g44100 Brassica carinata HOM05D005487 ORTHO05D027150 3.5e-18 97.1 69 62.3
Gohir.D13G151750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 6.0e-18 96.3 55 80.0
BolC9t55424H Brassica oleracea HOM05D005487 ORTHO05D027150 2.3e-17 94.4 66 65.2
BcaC04g21976 Brassica carinata HOM05D005487 ORTHO05D027150 1.5e-16 91.7 66 63.6
C09p25260 Brassica napus HOM05D005487 ORTHO05D027150 2.1e-15 87.8 66 60.6
SEGI_21127 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.2e-11 73.6 68 52.9
TAR381G0287 Trochodendron aralioides HOM05D005487 ORTHO05D415274 6.3e-07 59.7 36 72.2
MCO13G238 Micromonas commoda HOM05D004309 ORTHO05D005588 1.8e-06 58.2 121 33.9
SEGI_02276 Sequoiadendron giganteum HOM05D004309 ORTHO05D005588 2.4e-06 57.8 166 27.1
Pp3c6_20080 Physcomitrium patens HOM05D004309 ORTHO05D005588 5.3e-06 56.6 121 30.6


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