Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g07312 Nelumbo nucifera HOM05D001309 ORTHO05D000385 2.4e-63 245.4 125 100.0
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 5.2e-18 94.7 129 44.2
Nn1g01511 Nelumbo nucifera HOM05D063237 ORTHO05D000385 1.5e-17 93.2 46 93.5
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.0e-17 92.8 93 51.6
MBI15_g16946_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.5e-17 90.9 92 51.1
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 2.2e-16 89.4 137 40.1
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.3e-16 87.4 150 37.3
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.0e-15 84.3 136 37.5
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.0e-15 84.3 134 40.3
PGR044G2317 Punica granatum HOM05D001309 ORTHO05D000385 1.2e-14 83.6 123 40.7
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.6e-14 83.2 154 36.4
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 2.7e-14 82.4 139 36.7
MBI06_g39196_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.3e-13 80.1 151 36.4
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 6.6e-13 77.8 152 34.2
MBI01_g25649_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.6e-13 77.4 166 34.9
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.1e-12 77.0 154 34.4
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 4.3e-12 75.1 154 31.8
MBI10_g17725_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.6e-12 74.7 140 35.7
vmacro01714 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 7.3e-12 74.3 138 31.9
Cpa.g.sc113.47 Carica papaya HOM05D005763 ORTHO05D005970 9.5e-12 73.9 136 38.2
MBI02_g35833_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.2e-11 73.6 65 50.8
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 1.6e-11 73.2 139 33.8
MBI15_g14066_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.6e-11 73.2 135 37.0
MBI17_g21607_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.1e-11 70.9 124 35.5
TAR629G2892 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.0e-10 68.6 105 38.1
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 5.2e-10 68.2 118 37.3
MBI14_g03116_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.8e-10 67.8 134 34.3
vmacro21586 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 6.8e-10 67.8 98 41.8
vmacro21926 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 6.8e-10 67.8 101 41.6
vmacro23420 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 6.8e-10 67.8 101 41.6
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.9e-10 67.4 117 37.6
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.9e-10 67.4 117 37.6
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 8.9e-10 67.4 137 33.6
PGR044G2648 Punica granatum HOM05D000876 ORTHO05D000285 1.2e-09 67.0 115 37.4
CSS0014937 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.0e-09 66.2 125 36.8
CSS0000994 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.6e-09 65.9 117 36.8
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.6e-09 65.9 117 37.6
MBI02_g14797_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.6e-09 65.9 128 32.8
TAR374G1143 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.6e-09 65.9 112 35.7
Manes.11G024650 Manihot esculenta HOM05D008455 ORTHO05D009597 3.4e-09 65.5 102 36.3
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 3.4e-09 65.5 129 31.8
arahy.Tifrunner.gnm1.ann1.PL7LDA Arachis hypogaea HOM05D010482 ORTHO05D000385 4.4e-09 65.1 92 38.0
DCAR_001756 Daucus carota HOM05D001309 ORTHO05D000385 4.4e-09 65.1 118 37.3
Nn1g02510 Nelumbo nucifera HOM05D001309 ORTHO05D000385 4.4e-09 65.1 133 31.6
AUR62041080 Chenopodium quinoa HOM05D008576 ORTHO05D000385 5.8e-09 64.7 119 36.1
Sc11g0006850 Simmondsia chinensis HOM05D001309 ORTHO05D000385 5.8e-09 64.7 131 35.1
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.8e-09 64.7 133 33.1
CSS0040510 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.5e-09 64.3 117 36.8
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.5e-09 64.3 139 31.7
TAR365G0205 Trochodendron aralioides HOM05D000141 ORTHO05D000385 7.5e-09 64.3 139 31.7
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.5e-09 64.3 139 31.7
AUR62032223 Chenopodium quinoa HOM05D008576 ORTHO05D003213 9.9e-09 63.9 100 38.0
Hma1.2p1_0174F.1_g076560 Hydrangea macrophylla HOM05D001309 ORTHO05D000385 9.9e-09 63.9 123 33.3
CANSAT35G0020 Cannabis sativa HOM05D001309 ORTHO05D000385 1.3e-08 63.5 115 36.5
Manes.17G119328 Manihot esculenta HOM05D008455 ORTHO05D009597 1.3e-08 63.5 102 35.3
TAR376G0246 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.7e-08 63.2 145 30.3
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 1.7e-08 63.2 146 32.2
MBI09_g15192_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.2e-08 62.8 117 36.8
TAR375G0312 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.9e-08 62.4 137 31.4
TAR369G0469 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.7e-08 62.0 130 30.8
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.9e-08 61.6 139 30.9
Manes.17G118642 Manihot esculenta HOM05D008455 ORTHO05D009597 6.4e-08 61.2 102 34.3
TAR383G0561 Trochodendron aralioides HOM05D001309 ORTHO05D000385 8.3e-08 60.8 143 30.8
TAR375G1128 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.4e-07 60.1 126 31.7
TAR472G0003 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.4e-07 60.1 129 31.0
TAR633G1156 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.4e-07 60.1 126 31.7
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.4e-07 59.3 117 35.0
MBI09_g41431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.2e-07 58.9 62 46.8
TAR627G0996 Trochodendron aralioides HOM05D020484 ORTHO05D000385 3.2e-07 58.9 73 43.8
CANSAT21G2150 Cannabis sativa HOM05D001309 ORTHO05D000385 4.1e-07 58.5 116 32.8
MBI06_g41780_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.1e-07 58.5 105 32.4
arahy.Tifrunner.gnm1.ann1.LQJ2G8 Arachis hypogaea HOM05D010482 ORTHO05D000385 7.1e-07 57.8 121 31.4
TAR365G0630 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.1e-07 57.8 123 34.1
MBI19_g00150_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.2e-06 57.0 93 34.4
MBI15_g13426_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.6e-06 56.6 86 34.9
TAR633G2694 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.6e-06 56.6 145 28.3
CSS0015098 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.1e-06 56.2 132 29.5
TAR629G1907 Trochodendron aralioides HOM05D001225 ORTHO05D000239 2.1e-06 56.2 109 35.8
TAR629G2343 Trochodendron aralioides HOM05D000132 ORTHO05D000058 2.1e-06 56.2 78 41.0
COL.COLO4_07670 Corchorus olitorius HOM05D001309 ORTHO05D000385 2.7e-06 55.8 143 30.8
MBI05_g40696_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D000385 2.7e-06 55.8 41 53.7
Nitab4.5_0000522g0130 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.5e-06 55.5 86 38.4
Rhsim06G0190000 Rhododendron simsii HOM05D001309 ORTHO05D000385 3.5e-06 55.5 133 30.1
TAR626G0226 Trochodendron aralioides HOM05D009698 ORTHO05D000385 3.5e-06 55.5 75 41.3
arahy.Tifrunner.gnm1.ann1.465ER6 Arachis hypogaea HOM05D010482 ORTHO05D000385 4.6e-06 55.1 120 30.8
Nitab4.5_0003202g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.6e-06 55.1 103 31.1
AUR62036791 Chenopodium quinoa HOM05D008576 ORTHO05D000385 6.0e-06 54.7 94 40.4
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 6.0e-06 54.7 136 32.4
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.0e-06 54.7 135 30.4
arahy.Tifrunner.gnm1.ann1.P9GJ6G Arachis hypogaea HOM05D010482 ORTHO05D000385 7.8e-06 54.3 95 32.6
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.8e-06 54.3 130 30.0
TAR629G1726 Trochodendron aralioides HOM05D000969 ORTHO05D000899 7.8e-06 54.3 78 39.7


User provided reference genes

Program Settings