Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g07302 Nelumbo nucifera HOM05D001567 ORTHO05D001409 3.0e-100 368.6 201 100.0
Nn1g03375 Nelumbo nucifera HOM05D001567 ORTHO05D001409 3.3e-38 162.5 174 59.8
Hma1.2p1_0298F.1_g117420 Hydrangea macrophylla HOM05D001567 ORTHO05D001409 1.5e-30 137.1 206 43.2
TAR020G0004 Trochodendron aralioides HOM05D001567 ORTHO05D001409 2.6e-27 126.3 157 48.4
TAR629G0424 Trochodendron aralioides HOM05D001567 ORTHO05D001409 3.8e-26 122.5 157 50.3
Dinv20114 Davidia involucrata HOM05D001567 ORTHO05D001409 1.2e-24 117.5 157 48.4
TAR626G0005 Trochodendron aralioides HOM05D001567 ORTHO05D001409 8.7e-23 111.3 171 43.9
Actinidia02333 Actinidia chinensis HOM05D001567 ORTHO05D001409 1.9e-22 110.2 159 42.8
Manes.17G022526 Manihot esculenta HOM05D001567 ORTHO05D001409 1.2e-21 107.5 180 37.8
Thecc.06G229600 Theobroma cacao HOM05D001567 ORTHO05D001409 1.6e-21 107.1 154 44.2
Cpa.g.c45104 Carica papaya HOM05D001567 ORTHO05D001409 2.8e-21 106.3 144 43.8
vmacro03659 Vaccinium macrocarpon HOM05D001567 ORTHO05D001409 4.7e-21 105.5 151 45.7
Dinv39751 Davidia involucrata HOM05D001567 ORTHO05D001409 1.4e-20 104.0 160 42.5
Oeu007157.1 Olea europaea HOM05D001567 ORTHO05D001409 1.4e-20 104.0 163 44.2
CSS0012763 Camellia sinensis var. sinensis HOM05D001567 ORTHO05D001409 2.6e-19 99.8 149 45.0
Haze_06885 Corylus avellana HOM05D001567 ORTHO05D001409 3.4e-19 99.4 152 41.4
Ciclev10017636m.g Citrus clementina HOM05D001567 ORTHO05D001409 7.6e-19 98.2 155 43.2
DCAR_002207 Daucus carota HOM05D001567 ORTHO05D001409 7.6e-19 98.2 153 42.5
MSTRG.7186 Avicennia marina HOM05D001567 ORTHO05D001409 2.9e-18 96.3 161 42.2
Cfa000139 Carpinus fangiana HOM05D001567 ORTHO05D001409 3.8e-18 95.9 152 40.8
COL.COLO4_31845 Corchorus olitorius HOM05D001567 ORTHO05D001409 4.9e-18 95.5 174 38.5
Sabra04G0001700 Salix brachista HOM05D001567 ORTHO05D001409 4.9e-18 95.5 151 42.4
Cc09_g01120 Coffea canephora HOM05D001567 ORTHO05D001409 6.4e-18 95.1 160 41.2
Potri.004G003101 Populus trichocarpa HOM05D001567 ORTHO05D001409 8.4e-18 94.7 155 40.6
PGR042G3932 Punica granatum HOM05D001567 ORTHO05D001409 1.1e-17 94.4 162 40.1
ClCG01G021600 Citrullus lanatus HOM05D001567 ORTHO05D001409 1.4e-17 94.0 160 44.4
Migut.M01364 Erythranthe guttata HOM05D001567 ORTHO05D001409 1.9e-17 93.6 151 43.7
CANSAT56G0685 Cannabis sativa HOM05D001567 ORTHO05D001409 2.4e-17 93.2 154 41.6
CANSAT56G1550 Cannabis sativa HOM05D001567 ORTHO05D001409 2.4e-17 93.2 154 41.6
Duzib192G0402 Durio zibethinus HOM05D001567 ORTHO05D001409 3.2e-17 92.8 159 42.1
QL05p070193 Quercus lobata HOM05D001567 ORTHO05D001409 7.1e-17 91.7 152 42.8
CsaV3_6G048640 Cucumis sativus L. HOM05D001567 ORTHO05D001409 2.1e-16 90.1 165 41.8
QL03p008070 Quercus lobata HOM05D001567 ORTHO05D001409 3.5e-16 89.4 152 41.4
MELO3C007424.2 Cucumis melo HOM05D001567 ORTHO05D001409 7.8e-16 88.2 165 41.8
Duzib235G0464 Durio zibethinus HOM05D001567 ORTHO05D001409 7.8e-16 88.2 153 37.3
MBI19_g03674_MAGBIO Magnolia biondii HOM05D001567 ORTHO05D001409 7.8e-16 88.2 158 39.9
MD10G1328000 Malus domestica HOM05D001567 ORTHO05D001409 7.8e-16 88.2 151 43.0
PSO675G9389 Papaver somniferum HOM05D001567 ORTHO05D001409 7.8e-16 88.2 160 39.4
Nitab4.5_0009515g0010 Nicotiana tabacum HOM05D001567 ORTHO05D001409 3.0e-15 86.3 178 37.6
PSO541G3517 Papaver somniferum HOM05D001567 ORTHO05D001409 3.0e-15 86.3 161 40.4
MD05G1353900 Malus domestica HOM05D001567 ORTHO05D001409 3.9e-15 85.9 146 41.8
Sed0020262 Sechium edule HOM05D001567 ORTHO05D001409 5.1e-15 85.5 156 39.7
Gorai.010G184800 Gossypium raimondii HOM05D001567 ORTHO05D001409 3.3e-14 82.8 150 38.7
Rhsim13G0149500 Rhododendron simsii HOM05D001567 ORTHO05D001409 4.3e-14 82.4 155 37.4
Nitab4.5_0004821g0030 Nicotiana tabacum HOM05D001567 ORTHO05D001409 1.3e-13 80.9 180 36.7
Prupe.4G013900 Prunus persica HOM05D001567 ORTHO05D001409 1.3e-13 80.9 153 39.9
PSO832G1511 Papaver somniferum HOM05D001567 ORTHO05D001409 2.1e-13 80.1 157 36.3
Ah.09g234460 Amaranthus hybridus HOM05D001567 ORTHO05D001409 2.8e-13 79.7 165 41.2
Gohir.D06G158300 Gossypium hirsutum HOM05D001567 ORTHO05D001409 3.6e-13 79.3 144 38.2
Peaxi162Scf00521g00072 Petunia axillaris HOM05D001567 ORTHO05D001409 3.6e-13 79.3 173 33.5
Peaxi162Scf01096g00011 Petunia axillaris HOM05D001567 ORTHO05D001409 4.8e-13 79.0 155 41.9
Eucgr.E03980 Eucalyptus grandis HOM05D001567 ORTHO05D001409 8.1e-13 78.2 153 37.9
Lalb_Chr15g0087831 Lupinus albus HOM05D001567 ORTHO05D001409 8.1e-13 78.2 157 35.7
Nitab4.5_0002613g0010 Nicotiana tabacum HOM05D001567 ORTHO05D001409 8.1e-13 78.2 152 37.5
arahy.Tifrunner.gnm1.ann1.IL02F1 Arachis hypogaea HOM05D001567 ORTHO05D001409 1.1e-12 77.8 147 38.8
Thhalv10029329m.g Eutrema salsugineum HOM05D001567 ORTHO05D001409 1.4e-12 77.4 153 39.9
Glyma.07G264100 Glycine max HOM05D001567 ORTHO05D001409 1.4e-12 77.4 160 38.8
Gorai.009G182400 Gossypium raimondii HOM05D001567 ORTHO05D001409 1.4e-12 77.4 157 36.3
Glyma.17G009900 Glycine max HOM05D001567 ORTHO05D001409 1.8e-12 77.0 156 40.4
EL10Ac8g20137 Beta vulgaris HOM05D001567 ORTHO05D001409 2.4e-12 76.6 152 40.1
VMungo0540G0409 Vigna mungo HOM05D001567 ORTHO05D001409 2.4e-12 76.6 154 37.0
Gohir.A05G174000 Gossypium hirsutum HOM05D001567 ORTHO05D001409 4.0e-12 75.9 158 36.1
FvH4_3g01290 Fragaria vesca HOM05D001567 ORTHO05D001409 5.3e-12 75.5 164 38.4
Oeu051875.1 Olea europaea HOM05D000787 ORTHO05D001409 5.3e-12 75.5 231 32.5
arahy.Tifrunner.gnm1.ann1.KST8W5 Arachis hypogaea HOM05D001567 ORTHO05D001409 6.9e-12 75.1 147 40.1
Phvul.006G145000 Phaseolus vulgaris HOM05D001567 ORTHO05D001409 6.9e-12 75.1 154 36.4
FAN25G3753 Fragaria x ananassa HOM05D001567 ORTHO05D001409 9.0e-12 74.7 149 37.6
Gohir.D05G177000 Gossypium hirsutum HOM05D001567 ORTHO05D001409 9.0e-12 74.7 157 35.7
Lalb_Chr18g0056821 Lupinus albus HOM05D001567 ORTHO05D001409 9.0e-12 74.7 155 35.5
Duzib138G0709 Durio zibethinus HOM05D001567 ORTHO05D001409 1.5e-11 73.9 153 37.9
Glyma.09G008200 Glycine max HOM05D001567 ORTHO05D001409 1.5e-11 73.9 153 35.9
Glyma.15G112600 Glycine max HOM05D001567 ORTHO05D001409 1.5e-11 73.9 156 37.2
Lj6g0015850 Lotus japonicus HOM05D001567 ORTHO05D001409 1.5e-11 73.9 153 35.9
PSO210G6144 Papaver somniferum HOM05D001567 ORTHO05D001409 1.5e-11 73.9 157 35.7
CiPaw.10G075300 Carya illinoinensis HOM05D001567 ORTHO05D001409 2.0e-11 73.6 169 34.3
Lj4g0027518 Lotus japonicus HOM05D001567 ORTHO05D001409 2.0e-11 73.6 156 36.5
RcHm_v2.0_Chr5g0001841 Rosa chinensis HOM05D001567 ORTHO05D001409 2.6e-11 73.2 148 35.8
CSS0015197 Camellia sinensis var. sinensis HOM05D001567 ORTHO05D001409 3.4e-11 72.8 161 39.1
CSS0047477 Camellia sinensis var. sinensis HOM05D001567 ORTHO05D001409 4.5e-11 72.4 161 38.5
Ca_21058_v3 Cicer arietinum L. HOM05D001567 ORTHO05D001409 5.8e-11 72.0 153 35.3
Lsat_1_v5_gn_7_14220 Lactuca sativa HOM05D001567 ORTHO05D001409 5.8e-11 72.0 157 33.8
AL6G47750 Arabidopsis lyrata HOM05D001567 ORTHO05D001409 9.9e-11 71.2 142 36.6
PGSC0003DMG400016713 Solanum tuberosum HOM05D001567 ORTHO05D001409 9.9e-11 71.2 149 35.6
Aqoxy1G04181 Aquilegia oxysepala HOM05D001567 ORTHO05D001409 1.3e-10 70.9 157 35.7
TWI63G1699 Tripterygium wilfordii HOM05D001567 ORTHO05D001409 1.3e-10 70.9 144 36.8
AT4G03965 Arabidopsis thaliana HOM05D001567 ORTHO05D001409 1.7e-10 70.5 151 34.4
Sp6g04740 Schrenkiella parvula HOM05D001567 ORTHO05D001409 1.7e-10 70.5 151 37.7
FAN21G3527 Fragaria x ananassa HOM05D001567 ORTHO05D001409 2.2e-10 70.1 155 37.4
HanXRQChr15g0470761 Helianthus annuus HOM05D001567 ORTHO05D001409 2.2e-10 70.1 158 36.7
Nitab4.5_0000091g0430 Nicotiana tabacum HOM05D001567 ORTHO05D001409 2.2e-10 70.1 155 36.8
Rhsim04G0050200 Rhododendron simsii HOM05D001567 ORTHO05D001409 2.2e-10 70.1 157 38.2
Atru.chr10.2316 Acer truncatum HOM05D001567 ORTHO05D001409 2.9e-10 69.7 175 33.1
Carub.0006s3204 Capsella rubella HOM05D001567 ORTHO05D001409 3.8e-10 69.3 151 37.1
Hma1.2p1_0445F.1_g154300 Hydrangea macrophylla HOM05D001567 ORTHO05D001409 3.8e-10 69.3 158 35.4
THA.LOC104813470 Tarenaya hassleriana HOM05D001567 ORTHO05D001409 4.9e-10 68.9 153 37.3
PGSC0003DMG400024061 Solanum tuberosum HOM05D001567 ORTHO05D001409 6.4e-10 68.6 177 33.9
Thecc.01G182500 Theobroma cacao HOM05D001567 ORTHO05D001409 6.4e-10 68.6 167 35.9
Solyc02g081180.2 Solanum lycopersicum HOM05D001567 ORTHO05D001409 8.4e-10 68.2 150 34.0
CARHR253430 Cardamine hirsuta HOM05D001567 ORTHO05D001409 1.1e-09 67.8 151 37.7
MELO3C014436.2 Cucumis melo HOM05D001567 ORTHO05D001409 1.4e-09 67.4 155 34.8
Duzib211G0626 Durio zibethinus HOM05D001567 ORTHO05D001409 1.4e-09 67.4 176 32.4
Aqoxy1G02913 Aquilegia oxysepala HOM05D001567 ORTHO05D001409 1.9e-09 67.0 139 38.8
Hma1.2p1_2753F.1_g327910 Hydrangea macrophylla HOM05D001567 ORTHO05D001409 1.9e-09 67.0 111 41.4
COL.COLO4_21886 Corchorus olitorius HOM05D001567 ORTHO05D001409 2.4e-09 66.6 167 34.7
Hma1.2p1_0660F.1_g197410 Hydrangea macrophylla HOM05D001567 ORTHO05D001409 2.4e-09 66.6 111 42.3
QL08p030623 Quercus lobata HOM05D001567 ORTHO05D001409 3.2e-09 66.2 156 32.7
Sc05g0009480 Simmondsia chinensis HOM05D001567 ORTHO05D001409 3.2e-09 66.2 150 33.3
CsaV3_6G037770 Cucumis sativus L. HOM05D001567 ORTHO05D001409 4.2e-09 65.9 155 35.5
AUR62012764 Chenopodium quinoa HOM05D001567 ORTHO05D001409 5.4e-09 65.5 165 41.2
Sed0027499 Sechium edule HOM05D001567 ORTHO05D001409 5.4e-09 65.5 155 32.9
Cpa.g.sc132.26 Carica papaya HOM05D001567 ORTHO05D001409 9.3e-09 64.7 173 34.7
Manes.12G069400 Manihot esculenta HOM05D001567 ORTHO05D001409 9.3e-09 64.7 158 34.2
Nitab4.5_0011973g0020 Nicotiana tabacum HOM05D001567 ORTHO05D001409 9.3e-09 64.7 148 30.4
Psat1g177600 Pisum sativum HOM05D001567 ORTHO05D001409 9.3e-09 64.7 150 35.3
PGR042G2269 Punica granatum HOM05D001567 ORTHO05D001409 1.2e-08 64.3 164 32.9
Sopen02g025820 Solanum pennellii HOM05D001567 ORTHO05D001409 1.2e-08 64.3 150 34.0
Lsat_1_v5_gn_4_63001 Lactuca sativa HOM05D001567 ORTHO05D001409 2.1e-08 63.5 159 31.4
Solyc03g031830.1 Solanum lycopersicum HOM05D001567 ORTHO05D001409 2.1e-08 63.5 194 31.4
Haze_12764 Corylus avellana HOM05D001567 ORTHO05D001409 3.5e-08 62.8 155 35.5
Nitab4.5_0000130g0010 Nicotiana tabacum HOM05D001567 ORTHO05D001409 6.0e-08 62.0 148 30.4
CAN.G404.5 Capsicum annuum HOM05D000114 ORTHO05D005904 7.9e-08 61.6 120 35.0
Gohir.D11G159600 Gossypium hirsutum HOM05D001567 ORTHO05D001409 7.9e-08 61.6 161 34.8
TWI18G0363 Tripterygium wilfordii HOM05D001567 ORTHO05D001409 7.9e-08 61.6 147 36.7
Manes.13G065850 Manihot esculenta HOM05D001567 ORTHO05D001409 1.0e-07 61.2 160 33.8
Medtr2g025080 Medicago truncatula HOM05D001567 ORTHO05D001409 1.0e-07 61.2 147 34.0
Sopen07g024740 Solanum pennellii HOM05D001567 ORTHO05D001409 1.0e-07 61.2 149 30.2
Sopen03g005690 Solanum pennellii HOM05D001567 ORTHO05D001409 1.3e-07 60.8 194 33.5
Gorai.007G170200 Gossypium raimondii HOM05D001567 ORTHO05D001409 1.8e-07 60.5 161 34.2
HanXRQChr16g0516871 Helianthus annuus HOM05D001567 ORTHO05D001409 1.8e-07 60.5 157 34.4
Gohir.A11G152700 Gossypium hirsutum HOM05D001567 ORTHO05D001409 2.3e-07 60.1 161 34.2
CARHR229140 Cardamine hirsuta HOM05D001567 ORTHO05D001409 3.0e-07 59.7 150 32.0
Sp7g20370 Schrenkiella parvula HOM05D001567 ORTHO05D001409 3.9e-07 59.3 206 30.1
Solyc07g049400.1 Solanum lycopersicum HOM05D001567 ORTHO05D001409 6.7e-07 58.5 149 30.2
Actinidia10798 Actinidia chinensis HOM05D001567 ORTHO05D001409 8.7e-07 58.2 105 39.0
Ca_00700_v3 Cicer arietinum L. HOM05D001567 ORTHO05D001409 8.7e-07 58.2 144 34.7
Gohir.A06G152000 Gossypium hirsutum HOM05D001567 ORTHO05D001409 1.5e-06 57.4 106 34.9
Oeu051873.1 Olea europaea HOM05D000787 ORTHO05D001409 1.5e-06 57.4 49 53.1
Oeu051876.1 Olea europaea HOM05D001567 ORTHO05D001409 1.5e-06 57.4 49 53.1
Potri.011G020800 Populus trichocarpa HOM05D001567 ORTHO05D001409 1.5e-06 57.4 91 41.8
SGA_v2.0_scaffold7G03788 Striga asiatica HOM05D001567 ORTHO05D001409 1.5e-06 57.4 167 32.3
PGSC0003DMG400000688 Solanum tuberosum HOM05D001567 ORTHO05D001409 2.5e-06 56.6 148 28.4
AL7G31380 Arabidopsis lyrata HOM05D001567 ORTHO05D001409 3.3e-06 56.2 142 34.5
CiPaw.03G154900 Carya illinoinensis HOM05D001567 ORTHO05D001409 5.6e-06 55.5 155 32.3
Eucgr.K00751 Eucalyptus grandis HOM05D001567 ORTHO05D001409 7.4e-06 55.1 166 31.9
VMungo1215G2300 Vigna mungo HOM05D001567 ORTHO05D001409 7.4e-06 55.1 145 33.1
BcaB01g02609 Brassica carinata HOM05D001567 ORTHO05D001409 9.6e-06 54.7 155 34.2
C03p36140 Brassica napus HOM05D001567 ORTHO05D001409 9.6e-06 54.7 142 35.9
BolC3t15924H Brassica oleracea HOM05D001567 ORTHO05D001409 9.6e-06 54.7 142 35.9


User provided reference genes

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