Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g07174 Nelumbo nucifera HOM05D011640 ORTHO05D010391 1.1e-60 236.5 119 100.0
GSVIVG01037677001 Vitis vinifera HOM05D009499 ORTHO05D010391 3.9e-15 85.1 126 45.2
Actinidia32256 Actinidia chinensis HOM05D011640 ORTHO05D010391 5.3e-12 74.7 111 44.1
Aqoxy4G01859 Aquilegia oxysepala HOM05D032181 ORTHO05D010391 1.5e-11 73.2 127 39.4
CiPaw.12G131500 Carya illinoinensis HOM05D009499 ORTHO05D010391 1.5e-11 73.2 109 44.0
Dinv40772 Davidia involucrata HOM05D009499 ORTHO05D010391 3.4e-11 72.0 75 58.7
PGR031G3037 Punica granatum HOM05D009499 ORTHO05D010391 2.9e-10 68.9 125 37.6
Nitab4.5_0000328g0050 Nicotiana tabacum HOM05D011640 ORTHO05D010391 3.8e-10 68.6 91 42.9
Cfa020318 Carpinus fangiana HOM05D009499 ORTHO05D010391 7.2e-09 64.3 123 39.0
Nitab4.5_0002287g0020 Nicotiana tabacum HOM05D011640 ORTHO05D010391 9.4e-09 63.9 54 53.7
ECA246G2289 Erigeron canadensis HOM05D011640 ORTHO05D010391 1.6e-08 63.2 62 54.8
Lsat_1_v5_gn_5_2940 Lactuca sativa HOM05D001434 ORTHO05D004586 1.6e-08 63.2 74 50.0
HanXRQChr05g0159421 Helianthus annuus HOM05D011640 ORTHO05D010391 2.1e-08 62.8 76 48.7
Eucgr.F03479 Eucalyptus grandis HOM05D009499 ORTHO05D010391 2.7e-08 62.4 114 37.7
Peaxi162Scf00235g00428 Petunia axillaris HOM05D011640 ORTHO05D010391 2.7e-08 62.4 95 37.9
PSO541G2221 Papaver somniferum HOM05D032181 ORTHO05D010391 4.7e-08 61.6 122 35.2
Actinidia05084 Actinidia chinensis HOM05D011640 ORTHO05D010391 1.0e-07 60.5 118 38.1
Actinidia08341 Actinidia chinensis HOM05D011640 ORTHO05D010391 1.0e-07 60.5 118 38.1
Rhsim06G0215000 Rhododendron simsii HOM05D011640 ORTHO05D010391 1.0e-07 60.5 112 38.4
EL10Ac4g07773 Beta vulgaris HOM05D038550 ORTHO05D010391 1.8e-07 59.7 122 36.1
Gohir.A01G081300 Gossypium hirsutum HOM05D009499 ORTHO05D010391 2.3e-07 59.3 119 34.5
COL.COLO4_09684 Corchorus olitorius HOM05D009499 ORTHO05D010391 3.0e-07 58.9 111 36.9
Oeu062582.1 Olea europaea HOM05D011640 ORTHO05D010391 3.0e-07 58.9 102 38.2
Glyma.14G022200 Glycine max HOM05D009499 ORTHO05D010391 3.9e-07 58.5 108 38.9
Gohir.D01G068400 Gossypium hirsutum HOM05D009499 ORTHO05D010391 8.8e-07 57.4 119 32.8
Gorai.002G090400 Gossypium raimondii HOM05D009499 ORTHO05D010391 8.8e-07 57.4 119 32.8
MSTRG.6933 Avicennia marina HOM05D023005 ORTHO05D010391 1.1e-06 57.0 49 57.1
Cc05_g13990 Coffea canephora HOM05D011640 ORTHO05D010391 1.5e-06 56.6 126 34.1
PSO675G3371 Papaver somniferum HOM05D032181 ORTHO05D010391 2.0e-06 56.2 121 33.9
Sopen07g032950 Solanum pennellii HOM05D011640 ORTHO05D010391 2.6e-06 55.8 53 45.3
MD03G1198300 Malus domestica HOM05D009499 ORTHO05D010391 3.3e-06 55.5 113 36.3
Manes.03G131650 Manihot esculenta HOM05D009499 ORTHO05D010391 4.4e-06 55.1 53 47.2
Solyc07g064760.2 Solanum lycopersicum HOM05D011640 ORTHO05D010391 4.4e-06 55.1 52 51.9
vmacro11741 Vaccinium macrocarpon HOM05D011640 ORTHO05D010391 4.4e-06 55.1 106 35.8


User provided reference genes

Program Settings