Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g07051 Nelumbo nucifera HOM05D004673 ORTHO05D005596 4.9e-49 198.7 239 100.0
Nn1g04563 Nelumbo nucifera HOM05D004673 ORTHO05D005596 6.0e-23 112.1 91 60.4
Nn1g03613 Nelumbo nucifera HOM05D004673 ORTHO05D005596 4.8e-20 102.4 97 59.8
Dinv13478 Davidia involucrata HOM05D004673 ORTHO05D005596 1.5e-10 70.9 94 41.5
Haze_22936 Corylus avellana HOM05D004673 ORTHO05D005596 2.0e-10 70.5 97 45.4
TAR623G1034 Trochodendron aralioides HOM05D004673 ORTHO05D005596 5.9e-10 68.9 99 44.4
QL01p004573 Quercus lobata HOM05D004673 ORTHO05D005596 1.0e-09 68.2 95 45.3
Cfa009556 Carpinus fangiana HOM05D004673 ORTHO05D005596 1.7e-09 67.4 97 44.3
Cpa.g.c34637 Carica papaya HOM05D004673 ORTHO05D005596 2.9e-09 66.6 93 43.0
QL02p096023 Quercus lobata HOM05D004673 ORTHO05D005596 5.0e-09 65.9 96 40.6
Atru.chr1.2923 Acer truncatum HOM05D004673 ORTHO05D005596 1.4e-08 64.3 95 43.2
Dinv09263 Davidia involucrata HOM05D004673 ORTHO05D005596 1.4e-08 64.3 91 46.2
QL02p095991 Quercus lobata HOM05D004673 ORTHO05D005596 1.4e-08 64.3 97 41.2
Cpa.g.sc1158.1 Carica papaya HOM05D004673 ORTHO05D005596 3.2e-08 63.2 93 43.0
QL01p003522 Quercus lobata HOM05D000182 ORTHO05D005596 5.5e-08 62.4 87 40.2
THA.LOC104816064 Tarenaya hassleriana HOM05D004673 ORTHO05D005596 5.5e-08 62.4 91 46.2
Ciclev10024612m.g Citrus clementina HOM05D004673 ORTHO05D005596 7.2e-08 62.0 91 44.0
Aqoxy1G00488 Aquilegia oxysepala HOM05D004673 ORTHO05D005596 1.2e-07 61.2 97 43.3
GSVIVG01025485001 Vitis vinifera HOM05D004673 ORTHO05D005596 1.2e-07 61.2 92 44.6
Sabra01G0002200 Salix brachista HOM05D004673 ORTHO05D005596 2.1e-07 60.5 95 41.1
Ciclev10018053m.g Citrus clementina HOM05D004673 ORTHO05D005596 3.6e-07 59.7 100 42.0
DCAR_013113 Daucus carota HOM05D004673 ORTHO05D005596 4.6e-07 59.3 96 37.5
EL10Ac3g06819 Beta vulgaris HOM05D004673 ORTHO05D005596 6.1e-07 58.9 100 40.0
Lsat_1_v5_gn_1_25861 Lactuca sativa HOM05D004673 ORTHO05D005596 6.1e-07 58.9 93 40.9
Lsat_1_v5_gn_6_53540 Lactuca sativa HOM05D004673 ORTHO05D005596 6.1e-07 58.9 88 37.5
Nitab4.5_0000551g0010 Nicotiana tabacum HOM05D004673 ORTHO05D005596 6.1e-07 58.9 97 40.2
QL01p003771 Quercus lobata HOM05D004673 ORTHO05D005596 6.1e-07 58.9 101 40.6
QL01p016358 Quercus lobata HOM05D004673 ORTHO05D005596 7.9e-07 58.5 98 42.9
DCAR_030109 Daucus carota HOM05D004673 ORTHO05D005596 1.0e-06 58.2 90 41.1
DCAR_030116 Daucus carota HOM05D004673 ORTHO05D005596 1.0e-06 58.2 90 40.0
QL01p004727 Quercus lobata HOM05D004673 ORTHO05D005596 1.0e-06 58.2 99 41.4
ECA233G4672 Erigeron canadensis HOM05D004673 ORTHO05D005596 1.4e-06 57.8 101 40.6
TWI60G0809 Tripterygium wilfordii HOM05D004673 ORTHO05D005596 1.4e-06 57.8 70 48.6
QL01p016345 Quercus lobata HOM05D004673 ORTHO05D005596 1.8e-06 57.4 96 42.7
Nitab4.5_0006195g0010 Nicotiana tabacum HOM05D004673 ORTHO05D005596 3.9e-06 56.2 98 38.8
Peaxi162Scf00705g00063 Petunia axillaris HOM05D004673 ORTHO05D005596 3.9e-06 56.2 97 36.1
AUR62032055 Chenopodium quinoa HOM05D004673 ORTHO05D005596 5.1e-06 55.8 103 37.9
Rhsim13G0233200 Rhododendron simsii HOM05D004673 ORTHO05D005596 5.1e-06 55.8 97 39.2
DCAR_030114 Daucus carota HOM05D004673 ORTHO05D005596 6.7e-06 55.5 90 40.0
Lsat_1_v5_gn_6_55380 Lactuca sativa HOM05D004673 ORTHO05D005596 6.7e-06 55.5 91 44.0
Lsat_1_v5_gn_6_55581 Lactuca sativa HOM05D004673 ORTHO05D005596 6.7e-06 55.5 99 39.4


User provided reference genes

Program Settings