Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g07021 Nelumbo nucifera HOM05D023228 ORTHO05D005877 2.7e-86 322.0 170 100.0
Nn1g07020 Nelumbo nucifera HOM05D023228 ORTHO05D005877 1.6e-73 279.6 167 89.8
Nn1g07017 Nelumbo nucifera HOM05D023228 ORTHO05D005877 6.5e-64 247.7 150 89.3
Nn1g07014 Nelumbo nucifera HOM05D023228 ORTHO05D005877 2.9e-35 152.5 84 88.1
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 6.6e-16 88.2 135 38.5
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 1.6e-14 83.6 136 39.0
CDE05G1907 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 3.6e-14 82.4 135 39.3
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 6.2e-14 81.6 138 39.9
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 8.1e-14 81.3 139 40.3
CDE11G0063 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 1.4e-13 80.5 134 35.1
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 4.0e-13 79.0 136 39.7
CDE11G0553 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 2.0e-12 76.6 132 36.4
PSO541G5532 Papaver somniferum HOM05D006536 ORTHO05D005877 7.6e-12 74.7 139 38.8
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 9.9e-12 74.3 142 35.2
Hma1.2p1_0745F.1_g212040 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 1.3e-11 73.9 141 34.0
HanXRQChr11g0332911 Helianthus annuus HOM05D009374 ORTHO05D012864 2.2e-11 73.2 158 33.5
Peaxi162Scf00450g00854 Petunia axillaris HOM05D006536 ORTHO05D005877 2.2e-11 73.2 146 35.6
PSO478G5239 Papaver somniferum HOM05D006536 ORTHO05D005877 2.9e-11 72.8 133 37.6
MBI18_g21250_MAGBIO Magnolia biondii HOM05D006536 ORTHO05D005877 3.8e-11 72.4 102 44.1
Nitab4.5_0000472g0270 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.4e-10 70.5 149 34.9
Sabra11G0120700 Salix brachista HOM05D006536 ORTHO05D005877 1.4e-10 70.5 139 35.3
PSO541G3913 Papaver somniferum HOM05D006536 ORTHO05D005877 1.9e-10 70.1 141 39.0
Nitab4.5_0006023g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.4e-10 69.7 148 37.2
HanXRQChr11g0332931 Helianthus annuus HOM05D009374 ORTHO05D012864 3.2e-10 69.3 158 32.3
Migut.H00699 Erythranthe guttata HOM05D006536 ORTHO05D005877 4.2e-10 68.9 135 34.1
PSO541G4685 Papaver somniferum HOM05D006536 ORTHO05D005877 7.1e-10 68.2 139 38.1
HanXRQChr11g0337791 Helianthus annuus HOM05D009374 ORTHO05D012864 9.3e-10 67.8 156 30.8
ECA236G4404 Erigeron canadensis HOM05D009374 ORTHO05D012864 1.2e-09 67.4 155 31.6
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.2e-09 67.4 149 34.2
PSO675G9181 Papaver somniferum HOM05D006536 ORTHO05D005877 1.2e-09 67.4 139 38.1
Nn1g07031 Nelumbo nucifera HOM05D023228 ORTHO05D005877 2.1e-09 66.6 74 50.0
Potri.011G134400 Populus trichocarpa HOM05D006536 ORTHO05D005877 6.0e-09 65.1 140 32.9
Potri.011G134500 Populus trichocarpa HOM05D006536 ORTHO05D005877 6.0e-09 65.1 140 32.9
CANSAT11G1392 Cannabis sativa HOM05D006536 ORTHO05D005877 7.9e-09 64.7 103 35.0
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 1.3e-08 63.9 140 36.4
PSO541G2788 Papaver somniferum HOM05D006536 ORTHO05D005877 1.8e-08 63.5 134 35.1
ATR0686G133 Amborella trichopoda HOM05D031825 ORTHO05D005877 3.0e-08 62.8 130 35.4
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 3.0e-08 62.8 146 32.9
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 5.1e-08 62.0 149 33.6
ATR0686G059 Amborella trichopoda HOM05D031825 ORTHO05D005877 6.7e-08 61.6 130 36.2
Nitab4.5_0003924g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 6.7e-08 61.6 125 35.2
CANSAT54G1080 Cannabis sativa HOM05D006536 ORTHO05D005877 8.7e-08 61.2 140 32.1
ClCG10G005680 Citrullus lanatus HOM05D006536 ORTHO05D005877 8.7e-08 61.2 139 34.5
Solyc08g080480.3 Solanum lycopersicum HOM05D006536 ORTHO05D005877 8.7e-08 61.2 140 34.3
QL08p012979 Quercus lobata HOM05D006536 ORTHO05D005877 1.1e-07 60.8 145 31.7
Eucgr.F00977 Eucalyptus grandis HOM05D006536 ORTHO05D005877 1.5e-07 60.5 133 34.6
SalBow3G0084 Salvia bowleyana HOM05D003262 ORTHO05D003608 1.5e-07 60.5 166 31.3
Sed0024994 Sechium edule HOM05D006536 ORTHO05D005877 2.5e-07 59.7 148 31.8
Nitab4.5_0001479g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 3.3e-07 59.3 149 34.9
Manes.15G075900 Manihot esculenta HOM05D007475 ORTHO05D005877 4.3e-07 58.9 152 30.9
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 4.3e-07 58.9 149 30.2
TWI39G0888 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 5.6e-07 58.5 144 26.4
QL08p013125 Quercus lobata HOM05D009374 ORTHO05D005877 7.4e-07 58.2 143 27.3
CAN.G981.16 Capsicum annuum HOM05D006536 ORTHO05D005877 9.6e-07 57.8 139 30.2
unitig_744.g24698 Utricularia gibba HOM05D009374 ORTHO05D005877 9.6e-07 57.8 146 34.2
Dinv40717 Davidia involucrata HOM05D006536 ORTHO05D005877 1.3e-06 57.4 116 35.3
Sopen08g028800 Solanum pennellii HOM05D006536 ORTHO05D005877 1.3e-06 57.4 104 37.5
Ah.06g183000 Amaranthus hybridus HOM05D001264 ORTHO05D001167 1.6e-06 57.0 124 35.5
Manes.03G123318 Manihot esculenta HOM05D006536 ORTHO05D005877 1.6e-06 57.0 144 29.9
Peaxi162Scf00714g00424 Petunia axillaris HOM05D006536 ORTHO05D005877 1.6e-06 57.0 138 32.6
Peaxi162Scf00714g00432 Petunia axillaris HOM05D006536 ORTHO05D005877 2.1e-06 56.6 87 34.5
HanXRQChr13g0408641 Helianthus annuus HOM05D009374 ORTHO05D005877 2.8e-06 56.2 139 33.1
AUR62020540 Chenopodium quinoa HOM05D009374 ORTHO05D005877 3.7e-06 55.8 136 32.4
ClCG10G005660 Citrullus lanatus HOM05D006536 ORTHO05D005877 4.8e-06 55.5 91 31.9
AUR62015663 Chenopodium quinoa HOM05D009374 ORTHO05D005877 6.2e-06 55.1 139 30.9
PGR083G1686 Punica granatum HOM05D006536 ORTHO05D005877 6.2e-06 55.1 159 28.9
PGSC0003DMG400001033 Solanum tuberosum HOM05D006536 ORTHO05D005877 6.2e-06 55.1 150 30.7


User provided reference genes

Program Settings