Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g06849 Nelumbo nucifera HOM05D010490 ORTHO05D000126 5.9e-94 347.4 166 100.0
Nn4g24133 Nelumbo nucifera HOM05D010490 ORTHO05D000126 6.6e-69 264.2 168 79.2
Nn1g07336 Nelumbo nucifera HOM05D010490 ORTHO05D000126 8.7e-37 157.5 153 49.7
Nn1g00877 Nelumbo nucifera HOM05D010490 ORTHO05D000126 9.6e-36 154.1 167 45.5
Nn8g39965 Nelumbo nucifera HOM05D010490 ORTHO05D000126 1.3e-35 153.7 167 44.9
Nn4g23397 Nelumbo nucifera HOM05D010490 ORTHO05D000126 1.6e-35 153.3 165 43.0
Nn2g10957 Nelumbo nucifera HOM05D010490 ORTHO05D000126 2.9e-32 142.5 120 52.5
Nn3g19012 Nelumbo nucifera HOM05D010490 ORTHO05D000126 4.6e-30 135.2 125 52.8
Nn6g35719 Nelumbo nucifera HOM05D010490 ORTHO05D000126 2.6e-25 119.4 115 46.1
Nn7g36744 Nelumbo nucifera HOM05D010490 ORTHO05D000126 3.4e-25 119.0 105 51.4
Nn1g07259 Nelumbo nucifera HOM05D010490 ORTHO05D000126 1.1e-23 114.0 165 33.3
Nn1g01281 Nelumbo nucifera HOM05D010490 ORTHO05D000126 2.5e-23 112.8 98 50.0
Nn1g00353 Nelumbo nucifera HOM05D010490 ORTHO05D000126 5.5e-23 111.7 124 41.9
Nn4g22050 Nelumbo nucifera HOM05D010490 ORTHO05D000126 8.2e-19 97.8 166 35.5
TPR.G23677 Trifolium pratense HOM05D000003 ORTHO05D000126 1.5e-09 67.0 127 30.7
Hma1.2p1_2192F.1_g316723 Hydrangea macrophylla HOM05D003534 ORTHO05D000126 2.0e-09 66.6 143 30.8
Hma1.2p1_2192F.1_g316730 Hydrangea macrophylla HOM05D003534 ORTHO05D000126 2.0e-09 66.6 143 30.8
Hma1.2p1_2192F.1_g316746 Hydrangea macrophylla HOM05D003534 ORTHO05D000126 2.0e-09 66.6 143 30.8
Hma1.2p1_2496F.1_g323326 Hydrangea macrophylla HOM05D003534 ORTHO05D000126 2.0e-09 66.6 143 30.8
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 3.4e-09 65.9 127 29.9
Hma1.2p1_0051F.1_g029620 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 7.7e-09 64.7 138 27.5
Hma1.2p1_0145F.1_g065260 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 7.7e-09 64.7 109 35.8
TPR.G31906 Trifolium pratense HOM05D000003 ORTHO05D000006 7.7e-09 64.7 158 29.7
QL06p029562 Quercus lobata HOM05D000003 ORTHO05D000126 1.0e-08 64.3 138 25.4
TPR.G16107 Trifolium pratense HOM05D000003 ORTHO05D000126 1.3e-08 63.9 129 32.6
Eucgr.H01226 Eucalyptus grandis HOM05D000003 ORTHO05D000126 1.7e-08 63.5 130 29.2
Sed0003755 Sechium edule HOM05D000003 ORTHO05D000126 2.9e-08 62.8 111 33.3
Sed0019411 Sechium edule HOM05D000003 ORTHO05D000126 2.9e-08 62.8 111 33.3
COL.COLO4_20258 Corchorus olitorius HOM05D007567 ORTHO05D000126 6.5e-08 61.6 92 35.9
FvH4_3g05891 Fragaria vesca HOM05D000003 ORTHO05D000126 6.5e-08 61.6 97 30.9
Hma1.2p1_0028F.1_g017370 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 6.5e-08 61.6 173 26.6
Nitab4.5_0001238g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000126 8.5e-08 61.2 122 32.0
COL.COLO4_28311 Corchorus olitorius HOM05D007567 ORTHO05D000126 1.1e-07 60.8 78 37.2
Oeu036667.1 Olea europaea HOM05D000003 ORTHO05D000126 1.1e-07 60.8 127 32.3
Sed0012534 Sechium edule HOM05D061564 ORTHO05D000126 1.1e-07 60.8 58 48.3
Sed0026178 Sechium edule HOM05D000003 ORTHO05D000126 1.1e-07 60.8 96 35.4
Eucgr.A01843 Eucalyptus grandis HOM05D000003 ORTHO05D000126 1.9e-07 60.1 128 29.7
Hma1.2p1_0138F.1_g062620 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 1.9e-07 60.1 125 28.0
Nitab4.5_0003490g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000126 2.5e-07 59.7 83 37.3
Haze_11514 Corylus avellana HOM05D009730 ORTHO05D000126 3.2e-07 59.3 108 27.8
Haze_11520 Corylus avellana HOM05D009730 ORTHO05D000126 3.2e-07 59.3 108 27.8
Eucgr.C02117 Eucalyptus grandis HOM05D000003 ORTHO05D000126 4.2e-07 58.9 85 38.8
Hma1.2p1_0167F.1_g073680 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 4.2e-07 58.9 130 30.8
QL02p000576 Quercus lobata HOM05D002132 ORTHO05D002168 4.2e-07 58.9 124 31.5
PGSC0003DMG400020793 Solanum tuberosum HOM05D000003 ORTHO05D000126 4.2e-07 58.9 103 33.0
TPR.G36487 Trifolium pratense HOM05D000003 ORTHO05D000126 4.2e-07 58.9 130 30.8
QL08p005297 Quercus lobata HOM05D000003 ORTHO05D000006 5.5e-07 58.5 108 34.3
Rhsim03G0083400 Rhododendron simsii HOM05D000003 ORTHO05D000126 5.5e-07 58.5 103 30.1
Sed0011839 Sechium edule HOM05D000003 ORTHO05D000126 5.5e-07 58.5 114 29.8
Haze_05455 Corylus avellana HOM05D000003 ORTHO05D000126 7.2e-07 58.2 123 28.5
Lj6C513G2 Lonicera japonica HOM05D000003 ORTHO05D000126 7.2e-07 58.2 98 32.7
Nitab4.5_0000470g0220 Nicotiana tabacum HOM05D000003 ORTHO05D000126 7.2e-07 58.2 161 26.1
Rhsim12G0079700 Rhododendron simsii HOM05D000003 ORTHO05D000126 7.2e-07 58.2 114 30.7
Sed0014542 Sechium edule HOM05D000003 ORTHO05D000126 7.2e-07 58.2 104 30.8
Lj4C893T10 Lonicera japonica HOM05D000003 ORTHO05D000126 9.4e-07 57.8 112 30.4
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 9.4e-07 57.8 108 31.5
Nitab4.5_0007471g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000126 9.4e-07 57.8 101 32.7
Oeu011011.1 Olea europaea HOM05D000003 ORTHO05D000126 9.4e-07 57.8 91 31.9
RcHm_v2.0_Chr6g0249771 Rosa chinensis HOM05D000003 ORTHO05D000126 9.4e-07 57.8 97 33.0
Sed0014562 Sechium edule HOM05D000003 ORTHO05D000126 9.4e-07 57.8 111 33.3
Sed0015999 Sechium edule HOM05D000003 ORTHO05D000126 9.4e-07 57.8 64 42.2
AUR62040080 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.2e-06 57.4 86 36.0
Eucgr.D02404 Eucalyptus grandis HOM05D000003 ORTHO05D000126 1.2e-06 57.4 100 28.0
Hma1.2p1_1456F.1_g284630 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 1.2e-06 57.4 93 32.3
QL05p063585 Quercus lobata HOM05D000003 ORTHO05D000126 1.2e-06 57.4 108 33.3
QL12p014821 Quercus lobata HOM05D000003 ORTHO05D000126 1.2e-06 57.4 108 33.3
Sed0009960 Sechium edule HOM05D000003 ORTHO05D000126 1.2e-06 57.4 95 32.6
Eucgr.H03448 Eucalyptus grandis HOM05D000003 ORTHO05D000126 1.6e-06 57.0 93 33.3
QL02p008707 Quercus lobata HOM05D000003 ORTHO05D000126 1.6e-06 57.0 124 29.0
QL08p039671 Quercus lobata HOM05D000003 ORTHO05D000126 1.6e-06 57.0 135 28.9
Sed0004826 Sechium edule HOM05D000003 ORTHO05D000126 1.6e-06 57.0 95 33.7
SGA_v2.0_scaffold138G35235 Striga asiatica HOM05D000003 ORTHO05D000126 1.6e-06 57.0 95 32.6
AUR62022274 Chenopodium quinoa HOM05D000003 ORTHO05D000126 2.1e-06 56.6 86 34.9
AUR62035799 Chenopodium quinoa HOM05D000003 ORTHO05D000126 2.1e-06 56.6 86 36.0
Lj2g0016089 Lotus japonicus HOM05D000003 ORTHO05D000126 2.1e-06 56.6 124 29.8
COL.COLO4_34406 Corchorus olitorius HOM05D007567 ORTHO05D000126 2.7e-06 56.2 107 30.8
Dinv11369 Davidia involucrata HOM05D000003 ORTHO05D000126 2.7e-06 56.2 110 33.6
Lj4g0025238 Lotus japonicus HOM05D000003 ORTHO05D000126 2.7e-06 56.2 124 29.0
QL08p015746 Quercus lobata HOM05D000003 ORTHO05D000126 2.7e-06 56.2 118 28.0
QL08p032371 Quercus lobata HOM05D000003 ORTHO05D000126 2.7e-06 56.2 124 30.6
AUR62032102 Chenopodium quinoa HOM05D000003 ORTHO05D000126 3.6e-06 55.8 86 36.0
PGR142G4317 Punica granatum HOM05D000003 ORTHO05D000007 3.6e-06 55.8 96 31.2
QL03p023077 Quercus lobata HOM05D000003 ORTHO05D000126 3.6e-06 55.8 127 31.5
Rhsim07G0114000 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.6e-06 55.8 110 25.5
Sed0009410 Sechium edule HOM05D000003 ORTHO05D000126 3.6e-06 55.8 95 33.7
Sed0016457 Sechium edule HOM05D000003 ORTHO05D000126 3.6e-06 55.8 88 35.2
Sc21g0002580 Simmondsia chinensis HOM05D000003 ORTHO05D000126 3.6e-06 55.8 94 34.0
AUR62006279 Chenopodium quinoa HOM05D000003 ORTHO05D000126 4.7e-06 55.5 92 32.6
Dinv12507 Davidia involucrata HOM05D022672 ORTHO05D000126 4.7e-06 55.5 105 30.5
Lj4g0014165 Lotus japonicus HOM05D000003 ORTHO05D000126 4.7e-06 55.5 96 36.5
Nitab4.5_0003032g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000126 4.7e-06 55.5 103 31.1
SGA_v2.0_scaffold15G07343 Striga asiatica HOM05D000003 ORTHO05D000126 4.7e-06 55.5 93 33.3
CANSAT64G1604 Cannabis sativa HOM05D000003 ORTHO05D000126 6.1e-06 55.1 125 27.2
Haze_24509 Corylus avellana HOM05D000003 ORTHO05D000126 6.1e-06 55.1 109 27.5
Dinv19695 Davidia involucrata HOM05D000003 ORTHO05D000126 6.1e-06 55.1 96 32.3
Oeu010722.1 Olea europaea HOM05D000003 ORTHO05D000126 6.1e-06 55.1 95 32.6
QL11p000243 Quercus lobata HOM05D000003 ORTHO05D000126 6.1e-06 55.1 135 30.4
Rhsim04G0242400 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.1e-06 55.1 103 28.2
Sed0000842 Sechium edule HOM05D000003 ORTHO05D000126 6.1e-06 55.1 117 26.5
Sed0009985 Sechium edule HOM05D018412 ORTHO05D000126 6.1e-06 55.1 95 31.6
Sed0003577 Sechium edule HOM05D000003 ORTHO05D000126 7.9e-06 54.7 95 31.6


User provided reference genes

Program Settings