Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g06831 Nelumbo nucifera HOM05D008268 ORTHO05D010144 8.6e-199 696.8 360 100.0
Nn1g03824 Nelumbo nucifera HOM05D008268 ORTHO05D010144 8.1e-80 301.6 383 53.8
TAR626G0659 Trochodendron aralioides HOM05D008268 ORTHO05D010144 7.6e-54 215.3 382 43.5
MBI02_g38752_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 6.7e-34 149.1 317 39.4
MBI02_g46151_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 1.7e-32 144.4 317 38.8
Dinv08361 Davidia involucrata HOM05D008268 ORTHO05D010144 6.1e-27 125.9 370 32.2
Dinv22349 Davidia involucrata HOM05D008268 ORTHO05D010144 3.0e-26 123.6 355 33.8
CiPaw.11G178900 Carya illinoinensis HOM05D008268 ORTHO05D010144 2.6e-25 120.6 362 34.8
QL08p017136 Quercus lobata HOM05D008268 ORTHO05D010144 4.4e-25 119.8 332 33.4
Prupe.4G192500 Prunus persica HOM05D008268 ORTHO05D010144 5.7e-25 119.4 355 34.6
Cpa.g.sc12.16 Carica papaya HOM05D008268 ORTHO05D010144 4.8e-24 116.3 350 33.4
Cfa020486 Carpinus fangiana HOM05D008268 ORTHO05D010144 2.9e-21 107.1 342 34.2
Thecc.07G068700 Theobroma cacao HOM05D008268 ORTHO05D010144 6.5e-21 105.9 340 33.2
Duzib170G0253 Durio zibethinus HOM05D008268 ORTHO05D010144 1.6e-19 101.3 359 30.6
Manes.15G081401 Manihot esculenta HOM05D008268 ORTHO05D010144 4.0e-18 96.7 357 32.5
CDE02G2061 Ceratophyllum demersum HOM05D057939 ORTHO05D010144 1.1e-17 95.1 286 32.9
Phvul.005G087800 Phaseolus vulgaris HOM05D008268 ORTHO05D010144 5.7e-17 92.8 358 29.6
VMungo1080G0851 Vigna mungo HOM05D008268 ORTHO05D010144 9.7e-17 92.0 359 29.2
Glyma.13G282800 Glycine max HOM05D008268 ORTHO05D010144 1.3e-16 91.7 373 31.6
Actinidia09966 Actinidia chinensis HOM05D008268 ORTHO05D010144 2.8e-16 90.5 330 31.5
MD03G1216800 Malus domestica HOM05D008268 ORTHO05D010144 4.8e-16 89.7 306 33.0
Haze_09553 Corylus avellana HOM05D008268 ORTHO05D010144 1.4e-15 88.2 354 31.6
MD11G1234600 Malus domestica HOM05D008268 ORTHO05D010144 3.1e-15 87.0 301 34.2
Atru.chr2.2941 Acer truncatum HOM05D008268 ORTHO05D010144 1.2e-14 85.1 378 27.5
Duzib213G0412 Durio zibethinus HOM05D008268 ORTHO05D010144 7.7e-14 82.4 356 31.2
CSS0042196 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 1.3e-13 81.6 327 31.8
CSS0041304 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 1.7e-13 81.3 328 31.7
Gorai.002G077500 Gossypium raimondii HOM05D008268 ORTHO05D010144 1.1e-12 78.6 350 28.9
TWI38G2068 Tripterygium wilfordii HOM05D008268 ORTHO05D010144 1.5e-12 78.2 330 30.0
Gohir.D01G057100 Gossypium hirsutum HOM05D008268 ORTHO05D010144 1.9e-12 77.8 350 28.9
ATR1132G078 Amborella trichopoda HOM05D008268 ORTHO05D010144 4.7e-11 73.2 291 30.6
Gohir.A01G069900 Gossypium hirsutum HOM05D008268 ORTHO05D010144 6.1e-11 72.8 357 28.6
Oeu061273.1 Olea europaea HOM05D008268 ORTHO05D010144 1.0e-10 72.0 348 28.2
Peaxi162Scf00000g07812 Petunia axillaris HOM05D015394 ORTHO05D017774 1.0e-10 72.0 339 26.8
Lalb_Chr25g0286831 Lupinus albus HOM05D008268 ORTHO05D010144 1.8e-10 71.2 393 29.8
CANSAT11G1352 Cannabis sativa HOM05D008268 ORTHO05D010144 5.2e-10 69.7 350 30.3
Rhsim06G0192000 Rhododendron simsii HOM05D008268 ORTHO05D010144 3.4e-09 67.0 138 39.1
GSVIVG01014468001 Vitis vinifera HOM05D008268 ORTHO05D010144 1.7e-08 64.7 230 33.0
Peaxi162Scf01216g00063 Petunia axillaris HOM05D015394 ORTHO05D017774 6.3e-08 62.8 316 25.9
RcHm_v2.0_Chr6g0255571 Rosa chinensis HOM05D014484 ORTHO05D017021 6.3e-08 62.8 295 26.4
Potri.001G409000 Populus trichocarpa HOM05D019858 ORTHO05D010144 8.3e-08 62.4 374 27.3
RhsimUnG0172800 Rhododendron simsii HOM05D047612 ORTHO05D010144 8.3e-08 62.4 351 29.3
Glyma.12G217800 Glycine max HOM05D008268 ORTHO05D010144 1.1e-07 62.0 197 29.4
Solyc07g063670.2 Solanum lycopersicum HOM05D015394 ORTHO05D017774 1.1e-07 62.0 346 30.1
MELO3C018179.2 Cucumis melo HOM05D008268 ORTHO05D010144 1.4e-07 61.6 78 52.6
SHI51816 Sapria himalayana HOM05D008268 ORTHO05D010144 4.1e-07 60.1 407 26.3
CsaV3_3G044260 Cucumis sativus L. HOM05D008268 ORTHO05D010144 5.4e-07 59.7 71 54.9
FAN15G0243 Fragaria x ananassa HOM05D014484 ORTHO05D017021 5.4e-07 59.7 284 29.9
FAN27G0943 Fragaria x ananassa HOM05D014484 ORTHO05D017021 5.4e-07 59.7 328 29.0
Sopen07g031850 Solanum pennellii HOM05D015394 ORTHO05D017774 5.4e-07 59.7 270 28.1
FAN20G1673 Fragaria x ananassa HOM05D014484 ORTHO05D017021 9.1e-07 58.9 100 42.0
ClCG11G018600 Citrullus lanatus HOM05D008268 ORTHO05D010144 1.2e-06 58.5 59 61.0
Migut.M01849 Erythranthe guttata HOM05D008268 ORTHO05D010144 1.2e-06 58.5 289 28.0
PGR083G1493 Punica granatum HOM05D008268 ORTHO05D010144 1.6e-06 58.2 78 47.4
arahy.Tifrunner.gnm1.ann1.R70FHG Arachis hypogaea HOM05D008268 ORTHO05D010144 2.7e-06 57.4 302 27.8
Sabra16G0271800 Salix brachista HOM05D019858 ORTHO05D010144 2.7e-06 57.4 347 25.4
Sabra16G0276800 Salix brachista HOM05D019858 ORTHO05D010144 2.7e-06 57.4 347 25.4
FvH4_2g05340 Fragaria vesca HOM05D014484 ORTHO05D017021 5.9e-06 56.2 104 41.3
FAN24G1810 Fragaria x ananassa HOM05D014484 ORTHO05D017021 5.9e-06 56.2 104 41.3


User provided reference genes

Program Settings