Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 1.1e-182 643.3 341 100.0
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 3.3e-91 339.3 269 68.0
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 9.1e-73 278.1 268 60.1
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 1.0e-68 264.6 262 60.3
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 3.2e-62 243.0 252 56.3
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 4.7e-53 212.6 261 49.8
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 8.3e-50 201.8 258 50.8
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 1.8e-49 200.7 285 44.6
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 4.1e-49 199.5 253 49.0
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 2.0e-48 197.2 239 50.2
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 1.3e-47 194.5 251 47.8
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 2.9e-47 193.4 254 49.6
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 1.1e-46 191.4 252 49.6
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 3.2e-46 189.9 252 48.0
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 4.2e-46 189.5 239 54.4
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 1.2e-45 188.0 252 47.6
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.1e-45 187.2 275 46.5
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 4.7e-45 186.0 246 49.6
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 8.0e-45 185.3 243 49.8
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 1.4e-44 184.5 245 49.8
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 1.4e-44 184.5 303 43.2
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 1.8e-44 184.1 255 45.9
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 5.2e-44 182.6 252 49.2
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 1.5e-43 181.0 265 47.2
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 2.6e-43 180.3 203 54.2
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 9.8e-43 178.3 230 50.0
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 4.9e-42 176.0 248 47.2
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 4.9e-42 176.0 255 47.5
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 1.1e-41 174.9 240 47.5
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 2.4e-41 173.7 287 45.3
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 3.1e-41 173.3 237 46.4
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 5.4e-41 172.6 242 50.0
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 1.6e-40 171.0 287 43.9
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 2.7e-40 170.2 267 42.3
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 2.7e-40 170.2 259 49.8
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 5.9e-40 169.1 254 46.9
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 2.3e-39 167.2 230 49.6
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.9e-39 166.8 254 46.1
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 3.8e-39 166.4 238 48.3
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 3.8e-39 166.4 226 46.0
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 3.8e-39 166.4 258 45.0
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 1.5e-38 164.5 260 44.2
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 3.3e-38 163.3 244 47.5
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 5.6e-38 162.5 277 42.6
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 5.6e-38 162.5 277 42.6
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 7.3e-38 162.2 269 43.9
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 7.3e-38 162.2 269 44.2
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 3.6e-37 159.8 262 44.7
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 1.0e-36 158.3 245 46.1
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 1.0e-36 158.3 256 42.2
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 1.0e-36 158.3 242 45.0
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 1.4e-36 157.9 279 42.3
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 2.3e-36 157.1 255 43.1
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 3.0e-36 156.8 233 45.1
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 3.0e-36 156.8 241 41.9
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 6.8e-36 155.6 132 61.4
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 1.2e-35 154.8 229 48.9
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 1.2e-35 154.8 242 44.2
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 3.4e-35 153.3 268 42.5
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 5.7e-35 152.5 232 49.1
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 9.8e-35 151.8 266 40.2
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 1.7e-34 151.0 250 40.0
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.4e-33 147.9 198 46.5
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.4e-33 147.9 273 41.0
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.8e-33 147.5 259 41.7
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.4e-33 147.1 278 42.1
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 5.4e-33 146.0 234 44.4
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 5.4e-33 146.0 279 40.5
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 7.8e-32 142.1 241 43.6
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.3e-31 141.4 241 43.2
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 1.7e-31 141.0 240 43.3
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.7e-31 141.0 241 43.2
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 3.9e-31 139.8 246 42.7
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 1.1e-30 138.3 259 39.8
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 1.5e-30 137.9 242 40.9
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 2.1e-29 134.0 246 42.3
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 2.8e-29 133.7 249 41.0
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 2.8e-29 133.7 332 35.2
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 3.6e-29 133.3 190 46.8
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 8.9e-28 128.6 235 40.0
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 1.2e-27 128.3 228 44.3
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 4.4e-27 126.3 247 40.5
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 7.5e-27 125.6 274 36.1
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 1.7e-26 124.4 248 39.5
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 1.7e-26 124.4 234 38.0
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 2.9e-26 123.6 258 39.1
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 4.9e-26 122.9 241 41.5
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 3.2e-25 120.2 247 38.5
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 3.2e-25 120.2 259 37.8
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 4.1e-25 119.8 251 37.1
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 7.0e-25 119.0 252 38.9
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 9.2e-25 118.6 251 38.6
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 9.2e-25 118.6 284 36.3
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 1.2e-24 118.2 260 39.6
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 1.6e-24 117.9 246 39.4
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 1.6e-24 117.9 242 38.8
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 3.5e-24 116.7 133 50.4
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 1.3e-23 114.8 242 39.3
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 1.3e-23 114.8 120 52.5
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 1.7e-23 114.4 221 37.6
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 1.5e-22 111.3 263 40.3
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 1.2e-21 108.2 242 37.6
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 1.2e-21 108.2 127 49.6
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 1.6e-21 107.8 194 43.3
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 2.1e-21 107.5 256 37.9
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.8e-20 104.4 232 41.8
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.3e-20 104.0 226 42.9
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.3e-20 104.0 226 42.9
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 3.1e-20 103.6 258 38.4
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 4.0e-20 103.2 248 35.1
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 6.8e-20 102.4 236 34.7
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 5.4e-17 92.8 340 29.4
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 8.6e-15 85.5 312 31.7
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 1.6e-13 81.3 75 54.7
HPP92_012357 Vanilla planifolia HOM05D006486 ORTHO05D007888 8.9e-12 75.5 249 34.1
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 3.8e-10 70.1 154 38.3
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 2.4e-09 67.4 139 36.7
Nitab4.5_0001007g0050 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.7e-07 61.2 191 29.8
Oeu021600.1 Olea europaea HOM05D006486 ORTHO05D007888 3.3e-06 57.0 86 46.5


User provided reference genes

Program Settings