Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g06699 Nelumbo nucifera HOM05D007756 ORTHO05D009403 2.7e-29 131.3 66 100.0
Nn1g03943 Nelumbo nucifera HOM05D007756 ORTHO05D009403 1.4e-17 92.4 67 73.1
TAR679G0001 Trochodendron aralioides HOM05D007756 ORTHO05D009403 1.1e-11 72.8 69 62.3
Thecc.06G196200 Theobroma cacao HOM05D007756 ORTHO05D009403 1.2e-10 69.3 57 63.2
Cfa000372 Carpinus fangiana HOM05D007756 ORTHO05D009403 6.1e-10 67.0 60 63.3
Manes.16G022400 Manihot esculenta HOM05D007756 ORTHO05D009403 1.0e-09 66.2 60 65.0
Manes.16G038800 Manihot esculenta HOM05D007756 ORTHO05D009403 1.4e-09 65.9 56 64.3
Gohir.D10G020400 Gossypium hirsutum HOM05D007756 ORTHO05D009403 4.0e-09 64.3 55 58.2
Cfa000373 Carpinus fangiana HOM05D007756 ORTHO05D009403 5.2e-09 63.9 56 67.9
Gohir.D10G020250 Gossypium hirsutum HOM05D007756 ORTHO05D009403 1.2e-08 62.8 52 59.6
Eucgr.E03374 Eucalyptus grandis HOM05D007756 ORTHO05D009403 1.5e-08 62.4 36 83.3
CiPaw.10G120600 Carya illinoinensis HOM05D007756 ORTHO05D009403 2.6e-08 61.6 48 68.8
Eucgr.E03371 Eucalyptus grandis HOM05D007756 ORTHO05D009403 2.6e-08 61.6 40 82.5
Gohir.A05G164200 Gossypium hirsutum HOM05D007756 ORTHO05D009403 2.6e-08 61.6 60 55.0
Gohir.D05G167100 Gossypium hirsutum HOM05D007756 ORTHO05D009403 2.6e-08 61.6 60 55.0
Gorai.009G172100 Gossypium raimondii HOM05D007756 ORTHO05D009403 2.6e-08 61.6 60 55.0
Manes.17G040600 Manihot esculenta HOM05D007756 ORTHO05D009403 2.6e-08 61.6 49 65.3
Eucgr.E03373 Eucalyptus grandis HOM05D007756 ORTHO05D009403 9.8e-08 59.7 40 80.0
VMungo0251G2707 Vigna mungo HOM05D007756 ORTHO05D009403 9.8e-08 59.7 61 55.7
Gohir.A10G019600 Gossypium hirsutum HOM05D007756 ORTHO05D009403 1.3e-07 59.3 50 58.0
Prupe.4G039200 Prunus persica HOM05D007756 ORTHO05D009403 1.3e-07 59.3 50 64.0
Eucgr.E03372 Eucalyptus grandis HOM05D007756 ORTHO05D009403 1.7e-07 58.9 36 77.8
Gohir.A10G019400 Gossypium hirsutum HOM05D007756 ORTHO05D009403 2.2e-07 58.5 52 55.8
MD05G1323400 Malus domestica HOM05D007756 ORTHO05D009403 2.9e-07 58.2 45 66.7
Aqoxy1G02679 Aquilegia oxysepala HOM05D007756 ORTHO05D009403 3.7e-07 57.8 68 50.0
Gohir.A06G123802 Gossypium hirsutum HOM05D007756 ORTHO05D009403 3.7e-07 57.8 51 58.8
Cfa000371 Carpinus fangiana HOM05D007756 ORTHO05D009403 4.9e-07 57.4 58 55.2
Phvul.002G223500 Phaseolus vulgaris HOM05D007756 ORTHO05D009403 4.9e-07 57.4 61 50.8
Prupe.4G039100 Prunus persica HOM05D007756 ORTHO05D009403 6.4e-07 57.0 61 57.4
Potri.004G036350 Populus trichocarpa HOM05D007756 ORTHO05D009403 8.3e-07 56.6 45 68.9
Glyma.07G191400 Glycine max HOM05D007756 ORTHO05D009403 1.1e-06 56.2 57 59.6
Glyma.08G057900 Glycine max HOM05D007756 ORTHO05D009403 1.1e-06 56.2 57 59.6
Hma1.2p1_0144F.1_g064980 Hydrangea macrophylla HOM05D007756 ORTHO05D009403 1.1e-06 56.2 63 54.0
Potri.011G044800 Populus trichocarpa HOM05D007756 ORTHO05D009403 1.1e-06 56.2 48 62.5
CiPaw.09G159600 Carya illinoinensis HOM05D007756 ORTHO05D009403 1.4e-06 55.8 49 63.3
Gohir.D06G128650 Gossypium hirsutum HOM05D007756 ORTHO05D009403 1.4e-06 55.8 50 60.0
Hma1.2p1_0144F.1_g064960 Hydrangea macrophylla HOM05D007756 ORTHO05D009403 1.4e-06 55.8 62 54.8
GSVIVG01005837001 Vitis vinifera HOM05D007756 ORTHO05D009403 1.4e-06 55.8 32 78.1
Gohir.D06G128600 Gossypium hirsutum HOM05D007756 ORTHO05D009403 1.9e-06 55.5 51 54.9
Lalb_Chr09g0327421 Lupinus albus HOM05D007756 ORTHO05D009403 2.4e-06 55.1 51 62.7
CiPaw.09G159700 Carya illinoinensis HOM05D007756 ORTHO05D009403 3.2e-06 54.7 49 61.2
Potri.011G044700 Populus trichocarpa HOM05D007756 ORTHO05D009403 3.2e-06 54.7 60 55.0
MELO3C007318.2 Cucumis melo HOM05D007756 ORTHO05D009403 4.1e-06 54.3 37 67.6
Lj4g0000448 Lotus japonicus HOM05D007756 ORTHO05D009403 4.1e-06 54.3 40 62.5
RcHm_v2.0_Chr5g0006811 Rosa chinensis HOM05D007756 ORTHO05D009403 4.1e-06 54.3 44 68.2
Sed0008410 Sechium edule HOM05D007756 ORTHO05D009403 5.4e-06 53.9 38 68.4
COL.COLO4_31554 Corchorus olitorius HOM05D007756 ORTHO05D009403 7.0e-06 53.5 55 52.7
TPR.G32425 Trifolium pratense HOM05D007756 ORTHO05D009403 7.0e-06 53.5 34 76.5
RcHm_v2.0_Chr5g0006791 Rosa chinensis HOM05D007756 ORTHO05D009403 9.2e-06 53.1 46 63.0


User provided reference genes

Program Settings