Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g06616 Nelumbo nucifera HOM05D003676 ORTHO05D004262 9.8e-60 233.4 131 100.0
Nn5g30150 Nelumbo nucifera HOM05D003676 ORTHO05D004262 1.1e-31 140.2 126 65.1
TAR628G0168 Trochodendron aralioides HOM05D003676 ORTHO05D004262 9.3e-18 94.0 129 55.0
TAR376G0994 Trochodendron aralioides HOM05D003676 ORTHO05D004262 1.3e-16 90.1 116 50.0
CSS0021991 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 9.6e-15 84.0 131 51.1
PSO675G7127 Papaver somniferum HOM05D003676 ORTHO05D004262 1.3e-14 83.6 115 53.9
Nn1g05889 Nelumbo nucifera HOM05D003676 ORTHO05D004262 1.6e-14 83.2 117 58.1
PSO541G5658 Papaver somniferum HOM05D003676 ORTHO05D004262 2.8e-14 82.4 113 54.9
Dinv33627 Davidia involucrata HOM05D003676 ORTHO05D004262 6.3e-14 81.3 119 47.1
TAR381G0332 Trochodendron aralioides HOM05D003676 ORTHO05D004262 6.3e-14 81.3 115 55.7
CSS0022685 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 1.8e-13 79.7 131 48.1
Oeu063192.2 Olea europaea HOM05D003676 ORTHO05D004262 9.0e-13 77.4 113 46.9
Lj2A468T73 Lonicera japonica HOM05D003676 ORTHO05D004262 2.6e-12 75.9 116 44.8
MBI05_g37447_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 3.8e-11 72.0 117 46.2
AUR62029464 Chenopodium quinoa HOM05D003676 ORTHO05D004262 6.5e-11 71.2 115 43.5
Hma1.2p1_0956F.1_g241320 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 8.4e-11 70.9 113 46.0
Lalb_Chr05g0212401 Lupinus albus HOM05D003676 ORTHO05D004262 1.4e-10 70.1 114 43.9
vmacro18414 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 2.5e-10 69.3 119 52.1
Cc07_g10720 Coffea canephora HOM05D003676 ORTHO05D004262 4.2e-10 68.6 122 50.8
Oeu012589.1 Olea europaea HOM05D003676 ORTHO05D004262 4.2e-10 68.6 114 50.0
Hma1.2p1_0258F.1_g104145 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 1.2e-09 67.0 116 42.2
PGSC0003DMG400003640 Solanum tuberosum HOM05D003676 ORTHO05D004262 1.2e-09 67.0 111 43.2
Dinv40087 Davidia involucrata HOM05D003676 ORTHO05D004262 1.6e-09 66.6 122 42.6
Actinidia17444 Actinidia chinensis HOM05D003676 ORTHO05D004262 2.7e-09 65.9 108 42.6
Thecc.01G019000 Theobroma cacao HOM05D003676 ORTHO05D004262 2.7e-09 65.9 114 52.6
Peaxi162Scf00083g00320 Petunia axillaris HOM05D003676 ORTHO05D004262 4.6e-09 65.1 118 50.8
QL06p032755 Quercus lobata HOM05D003676 ORTHO05D004262 6.1e-09 64.7 117 48.7
Sopen02g028680 Solanum pennellii HOM05D003676 ORTHO05D004262 6.1e-09 64.7 117 50.4
Aqoxy6G02292 Aquilegia oxysepala HOM05D003676 ORTHO05D004262 1.8e-08 63.2 109 43.1
CSS0018215 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 1.8e-08 63.2 114 50.9
Actinidia30997 Actinidia chinensis HOM05D003676 ORTHO05D004262 2.3e-08 62.8 103 42.7
Nn1g05888 Nelumbo nucifera HOM05D003676 ORTHO05D004262 2.3e-08 62.8 49 63.3
HPP92_020902 Vanilla planifolia HOM05D003676 ORTHO05D004262 2.3e-08 62.8 117 49.6
unitig_736.g22721 Utricularia gibba HOM05D003676 ORTHO05D004262 3.0e-08 62.4 106 49.1
Ciclev10025949m.g Citrus clementina HOM05D003676 ORTHO05D004262 5.1e-08 61.6 121 43.8
RcHm_v2.0_Chr2g0099451 Rosa chinensis HOM05D003676 ORTHO05D004262 5.1e-08 61.6 124 43.5
Sabra05G0093400 Salix brachista HOM05D003676 ORTHO05D004262 5.1e-08 61.6 126 38.1
ECA232G1625 Erigeron canadensis HOM05D003676 ORTHO05D004262 6.7e-08 61.2 104 44.2
Gohir.A02G170700 Gossypium hirsutum HOM05D003676 ORTHO05D004262 8.7e-08 60.8 91 50.5
Nitab4.5_0005660g0010 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.1e-07 60.5 115 46.1
Oeu048461.1 Olea europaea HOM05D003676 ORTHO05D004262 1.1e-07 60.5 115 47.8
TWI09G1351 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 1.1e-07 60.5 113 46.0
Lj4g0000664 Lotus japonicus HOM05D003676 ORTHO05D004262 1.5e-07 60.1 121 35.5
Cfa006972 Carpinus fangiana HOM05D003676 ORTHO05D004262 1.9e-07 59.7 115 47.8
Glyma.01G166300 Glycine max HOM05D003676 ORTHO05D004262 1.9e-07 59.7 90 41.1
Solyc02g083890.4 Solanum lycopersicum HOM05D003676 ORTHO05D004262 1.9e-07 59.7 111 41.4
Medtr5g022010 Medicago truncatula HOM05D003676 ORTHO05D004262 2.5e-07 59.3 93 49.5
Nitab4.5_0003382g0020 Nicotiana tabacum HOM05D003676 ORTHO05D004262 2.5e-07 59.3 109 48.6
Psat4g099080 Pisum sativum HOM05D003676 ORTHO05D004262 2.5e-07 59.3 113 45.1
Eucgr.I02350 Eucalyptus grandis HOM05D003676 ORTHO05D004262 3.3e-07 58.9 105 48.6
Nn8g38913 Nelumbo nucifera HOM05D003676 ORTHO05D004262 3.3e-07 58.9 41 70.7
TPR.G18183 Trifolium pratense HOM05D003676 ORTHO05D004262 4.3e-07 58.5 99 48.5
AUR62003369 Chenopodium quinoa HOM05D003676 ORTHO05D004262 7.4e-07 57.8 122 36.9
Duzib187G0981 Durio zibethinus HOM05D003676 ORTHO05D004262 7.4e-07 57.8 105 48.6
Gohir.D03G009400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 9.7e-07 57.4 97 48.5
Potri.005G114100 Populus trichocarpa HOM05D003676 ORTHO05D004262 9.7e-07 57.4 119 44.5
Psat2g154560 Pisum sativum HOM05D003676 ORTHO05D004262 1.3e-06 57.0 110 48.2
Rhsim10G0212200 Rhododendron simsii HOM05D003676 ORTHO05D004262 1.3e-06 57.0 112 51.8
MBI05_g30743_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 1.6e-06 56.6 118 39.8
MSTRG.2714 Avicennia marina HOM05D003676 ORTHO05D004262 2.2e-06 56.2 118 48.3
Gorai.003G009600 Gossypium raimondii HOM05D003676 ORTHO05D004262 2.2e-06 56.2 94 51.1
Actinidia22976 Actinidia chinensis HOM05D003676 ORTHO05D004262 2.8e-06 55.8 116 45.7
CDE05G2608 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 2.8e-06 55.8 117 37.6
PGR119G1864 Punica granatum HOM05D003676 ORTHO05D004262 4.8e-06 55.1 114 47.4


User provided reference genes

Program Settings