Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 4.6e-230 800.8 392 100.0
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 1.8e-165 586.3 389 74.3
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 2.2e-155 552.7 391 71.1
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 3.9e-152 542.0 387 69.3
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 3.9e-152 542.0 400 67.5
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 1.2e-150 537.0 365 73.2
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 1.2e-150 537.0 387 67.7
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 4.4e-148 528.5 394 66.2
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 4.4e-148 528.5 374 70.6
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 2.2e-147 526.2 395 67.1
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 3.7e-147 525.4 383 67.9
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 1.1e-146 523.9 393 68.2
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 1.4e-146 523.5 399 66.4
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 1.4e-146 523.5 393 68.2
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 1.9e-146 523.1 393 67.9
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 2.7e-145 519.2 387 67.7
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 2.7e-145 519.2 420 62.9
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 1.7e-144 516.5 352 71.9
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 1.7e-144 516.5 352 71.9
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 3.0e-144 515.8 390 66.2
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 2.5e-143 512.7 346 71.1
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 4.3e-143 511.9 393 65.4
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 5.6e-143 511.5 391 66.5
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.1e-141 507.3 390 65.4
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 3.1e-141 505.8 388 66.0
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 3.4e-140 502.3 325 74.8
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 5.8e-140 501.5 377 66.8
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 2.2e-139 499.6 376 68.6
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 4.9e-139 498.4 329 72.0
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 6.4e-139 498.0 395 64.6
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 1.1e-138 497.3 410 62.9
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 2.1e-137 493.0 348 68.7
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 2.1e-137 493.0 333 70.9
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 1.0e-136 490.7 368 67.4
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 3.9e-136 488.8 351 67.5
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 1.1e-135 487.3 360 68.6
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 1.9e-135 486.5 354 67.8
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 1.6e-134 483.4 347 68.6
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 1.6e-134 483.4 327 70.6
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 1.6e-134 483.4 353 67.7
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 2.1e-134 483.0 338 68.6
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 2.8e-134 482.6 359 66.6
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 3.6e-134 482.3 337 70.9
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 1.8e-133 479.9 385 62.6
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 3.1e-133 479.2 367 64.9
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 9.0e-133 477.6 385 62.3
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 9.0e-133 477.6 385 62.3
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 1.2e-132 477.2 369 65.3
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 1.5e-132 476.9 329 69.0
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 2.6e-132 476.1 360 65.3
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 3.4e-132 475.7 350 66.3
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 4.5e-132 475.3 350 66.3
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 7.6e-132 474.6 349 65.6
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 1.7e-131 473.4 356 66.9
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 1.1e-130 470.7 388 63.9
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 1.4e-130 470.3 336 67.6
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 2.4e-130 469.5 357 65.8
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 2.4e-130 469.5 332 67.5
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 4.2e-130 468.8 335 67.2
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 5.4e-130 468.4 330 69.4
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 5.4e-130 468.4 331 68.9
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 7.1e-130 468.0 336 67.6
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 2.1e-129 466.5 363 62.0
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 2.7e-129 466.1 411 57.4
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 2.7e-129 466.1 330 68.5
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 7.9e-129 464.5 393 59.3
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 1.3e-128 463.8 374 62.6
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 1.3e-126 457.2 346 65.0
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 8.1e-126 454.5 354 63.8
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 2.0e-124 449.9 330 63.3
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 4.5e-124 448.7 349 64.8
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 4.9e-123 445.3 390 60.8
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 6.4e-123 444.9 363 59.5
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 6.4e-123 444.9 359 59.9
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 1.1e-122 444.1 353 61.8
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 3.2e-122 442.6 390 61.0
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 2.5e-119 433.0 417 54.7
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 1.8e-117 426.8 387 57.9
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 5.8e-116 421.8 318 65.7
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 2.2e-115 419.9 389 56.6
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 4.2e-114 415.6 329 63.5
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 6.0e-113 411.8 359 56.3
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 1.3e-112 410.6 355 62.0
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 7.4e-111 404.8 352 61.6
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 2.6e-108 396.4 263 68.4
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 2.2e-107 393.3 545 45.0
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 3.2e-106 389.4 242 76.0
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 3.9e-104 382.5 331 58.9
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 1.9e-103 380.2 289 63.7
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 5.7e-103 378.6 277 65.0
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 6.9e-101 371.7 341 57.5
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 9.7e-95 351.3 303 59.1
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 6.3e-94 348.6 236 70.8
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 9.4e-90 334.7 321 50.5
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 6.5e-83 312.0 390 49.0
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 6.5e-83 312.0 337 47.2
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 5.5e-82 308.9 260 57.7
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 8.2e-78 295.0 376 46.3
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 1.8e-77 293.9 166 78.3
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 6.3e-70 268.9 277 47.7
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 5.9e-68 262.3 197 63.5
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 1.2e-57 228.0 351 39.3
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 1.1e-34 151.8 168 48.2
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 1.1e-32 145.2 104 71.2
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 4.6e-28 129.8 78 75.6
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 4.6e-28 129.8 101 63.4
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.1e-18 98.6 72 73.6
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 9.6e-18 95.5 101 47.5
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 3.2e-13 80.5 57 73.7
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 6.7e-11 72.8 74 47.3
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 7.4e-10 69.3 39 76.9
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 6.2e-09 66.2 79 44.3
SEGI_34366 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 2.6e-07 60.8 57 49.1


User provided reference genes

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