Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 5.8e-34 147.1 82 100.0
Nn1g04077 Nelumbo nucifera HOM05D005953 ORTHO05D004056 2.6e-18 95.1 84 71.4
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 2.2e-17 92.0 82 69.5
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 2.2e-17 92.0 82 72.0
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 4.9e-17 90.9 82 68.3
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 2.7e-15 85.1 82 63.4
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 2.5e-13 78.6 85 64.7
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 4.3e-13 77.8 83 63.9
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 6.2e-12 73.9 82 61.0
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 1.2e-10 69.7 82 56.1
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 1.2e-10 69.7 82 58.5
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 2.0e-10 68.9 82 54.9
CDE08G1618 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 2.0e-10 68.9 84 58.3
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 2.6e-10 68.6 85 55.3
PSO675G7471 Papaver somniferum HOM05D005953 ORTHO05D004056 2.6e-10 68.6 81 54.3
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 5.8e-10 67.4 82 53.7
Sed0013976 Sechium edule HOM05D005953 ORTHO05D004056 5.8e-10 67.4 82 59.8
ClCG07G002930 Citrullus lanatus HOM05D005953 ORTHO05D004056 1.0e-09 66.6 85 54.1
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 1.0e-09 66.6 82 53.7
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 1.0e-09 66.6 82 53.7
Nitab4.5_0002253g0010 Nicotiana tabacum HOM05D005953 ORTHO05D004056 1.7e-09 65.9 84 56.0
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 2.2e-09 65.5 82 53.7
Aqoxy1G02469 Aquilegia oxysepala HOM05D005953 ORTHO05D004056 2.9e-09 65.1 88 55.7
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 8.4e-09 63.5 82 52.4
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 1.4e-08 62.8 82 53.7
Lalb_Chr03g0029431 Lupinus albus HOM05D005953 ORTHO05D004056 3.2e-08 61.6 82 53.7
MELO3C018738.2 Cucumis melo HOM05D005953 ORTHO05D004056 4.2e-08 61.2 86 53.5
Dinv23644 Davidia involucrata HOM05D005953 ORTHO05D004056 4.2e-08 61.2 82 53.7
Actinidia09855 Actinidia chinensis HOM05D005953 ORTHO05D004056 5.5e-08 60.8 82 56.1
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 5.5e-08 60.8 84 54.8
PGR042G2028 Punica granatum HOM05D005953 ORTHO05D004056 7.1e-08 60.5 92 50.0
Carub.0007s1247 Capsella rubella HOM05D005953 ORTHO05D004056 9.3e-08 60.1 83 54.2
CDE02G2683 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 9.3e-08 60.1 83 51.8
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 9.3e-08 60.1 84 54.8
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 9.3e-08 60.1 81 53.1
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 9.3e-08 60.1 81 53.1
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 1.2e-07 59.7 84 52.4
ClCG02G017620 Citrullus lanatus HOM05D005953 ORTHO05D004056 4.6e-07 57.8 82 52.4
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 6.1e-07 57.4 82 52.4
Nitab4.5_0002520g0050 Nicotiana tabacum HOM05D008304 ORTHO05D004056 6.1e-07 57.4 88 52.3
Peaxi162Scf00206g01011 Petunia axillaris HOM05D005953 ORTHO05D004056 6.1e-07 57.4 85 51.8
CiPaw.03G176600 Carya illinoinensis HOM05D005953 ORTHO05D004056 7.9e-07 57.0 34 73.5
Nitab4.5_0002575g0070 Nicotiana tabacum HOM05D005953 ORTHO05D004056 7.9e-07 57.0 84 54.8
TAR629G3464 Trochodendron aralioides HOM05D008304 ORTHO05D004056 7.9e-07 57.0 83 49.4
ATR0776G010 Amborella trichopoda HOM05D045262 ORTHO05D004056 1.0e-06 56.6 98 45.9
Peaxi162Scf00008g00097 Petunia axillaris HOM05D005953 ORTHO05D004056 1.0e-06 56.6 85 52.9
TAR627G0894 Trochodendron aralioides HOM05D005953 ORTHO05D004056 1.0e-06 56.6 82 50.0
Lalb_Chr14g0366901 Lupinus albus HOM05D005953 ORTHO05D004056 1.3e-06 56.2 82 48.8
BolC1t02424H Brassica oleracea HOM05D005953 ORTHO05D004056 3.0e-06 55.1 83 53.0
ECA246G2973 Erigeron canadensis HOM05D005953 ORTHO05D004056 3.0e-06 55.1 83 49.4
HPP92_014946 Vanilla planifolia HOM05D005953 ORTHO05D004056 3.0e-06 55.1 83 47.0
Actinidia22217 Actinidia chinensis HOM05D008304 ORTHO05D004056 3.9e-06 54.7 88 48.9
FvH4_5g10570 Fragaria vesca HOM05D008304 ORTHO05D004056 3.9e-06 54.7 82 47.6
FAN04G0709 Fragaria x ananassa HOM05D008304 ORTHO05D012179 3.9e-06 54.7 82 47.6
FAN13G2184 Fragaria x ananassa HOM05D008304 ORTHO05D012179 3.9e-06 54.7 82 47.6
FAN18G4101 Fragaria x ananassa HOM05D008304 ORTHO05D012179 3.9e-06 54.7 82 47.6
Gohir.A12G241800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 3.9e-06 54.7 82 47.6
Potri.019G100601 Populus trichocarpa HOM05D005953 ORTHO05D004056 3.9e-06 54.7 82 47.6
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 3.9e-06 54.7 83 47.0
ATR0304G024 Amborella trichopoda HOM05D005953 ORTHO05D004056 5.1e-06 54.3 86 52.3
CiPaw.11G110100 Carya illinoinensis HOM05D008304 ORTHO05D004056 5.1e-06 54.3 88 46.6
Ciclev10023139m.g Citrus clementina HOM05D008304 ORTHO05D004056 5.1e-06 54.3 83 47.0
HPP92_014983 Vanilla planifolia HOM05D005953 ORTHO05D004056 5.1e-06 54.3 83 47.0
Actinidia30473 Actinidia chinensis HOM05D005953 ORTHO05D004056 6.7e-06 53.9 82 50.0
Actinidia39315 Actinidia chinensis HOM05D005953 ORTHO05D004056 6.7e-06 53.9 82 50.0
Duzib205G1739 Durio zibethinus HOM05D008304 ORTHO05D004056 6.7e-06 53.9 84 48.8
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 6.7e-06 53.9 82 47.6
C01p24770 Brassica napus HOM05D005953 ORTHO05D004056 8.7e-06 53.5 86 50.0
Gorai.008G260200 Gossypium raimondii HOM05D008304 ORTHO05D004056 8.7e-06 53.5 82 47.6
Sabra13G0111400 Salix brachista HOM05D005953 ORTHO05D004056 8.7e-06 53.5 80 51.2


User provided reference genes

Program Settings