Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g06569 Nelumbo nucifera HOM05D001108 ORTHO05D005418 8.5e-151 537.0 268 100.0
Nn1g04079 Nelumbo nucifera HOM05D001108 ORTHO05D005418 2.1e-101 372.9 257 77.4
TAR627G0387 Trochodendron aralioides HOM05D001108 ORTHO05D005418 2.4e-100 369.4 260 73.5
PSO478G1555 Papaver somniferum HOM05D001108 ORTHO05D005418 5.4e-89 331.6 254 68.5
CSS0002926 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 2.1e-88 329.7 228 73.7
CSS0042510 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 6.0e-88 328.2 228 73.7
CSS0044059 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 6.0e-88 328.2 228 73.7
QL08p038694 Quercus lobata HOM05D001108 ORTHO05D005418 1.3e-87 327.0 263 65.8
PSO675G3815 Papaver somniferum HOM05D001108 ORTHO05D005418 3.0e-87 325.9 261 66.3
Sc21g0002830 Simmondsia chinensis HOM05D001108 ORTHO05D005418 3.0e-87 325.9 234 72.6
Hund07929 Selenicereus undatus HOM05D001108 ORTHO05D005418 3.9e-87 325.5 241 68.9
PSO541G4613 Papaver somniferum HOM05D001108 ORTHO05D005418 8.7e-87 324.3 241 68.9
CSS0039738 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 1.9e-86 323.2 213 77.0
Haze_21052 Corylus avellana HOM05D001108 ORTHO05D001619 2.5e-86 322.8 260 64.2
PSO782G4551 Papaver somniferum HOM05D001108 ORTHO05D005418 2.5e-86 322.8 254 66.9
CiPaw.04G125800 Carya illinoinensis HOM05D001108 ORTHO05D005418 3.3e-86 322.4 260 64.2
EL10Ac9g20764 Beta vulgaris HOM05D001108 ORTHO05D005418 9.6e-86 320.9 230 71.3
Prupe.3G137500 Prunus persica HOM05D001108 ORTHO05D005418 2.1e-85 319.7 230 70.0
HanXRQChr06g0171321 Helianthus annuus HOM05D001108 ORTHO05D005418 4.0e-84 315.5 213 75.1
Ah.01g015170 Amaranthus hybridus HOM05D001108 ORTHO05D005418 6.9e-84 314.7 211 76.3
CANSAT80G2367 Cannabis sativa HOM05D001108 ORTHO05D005418 6.9e-84 314.7 245 64.5
vmacro12300 Vaccinium macrocarpon HOM05D001108 ORTHO05D005418 6.9e-84 314.7 230 70.4
MD09G1247800 Malus domestica HOM05D001108 ORTHO05D005418 1.5e-83 313.5 229 69.0
MD17G1240700 Malus domestica HOM05D001108 ORTHO05D005418 1.5e-83 313.5 230 68.7
Ciclev10013903m.g Citrus clementina HOM05D001108 ORTHO05D005418 2.0e-83 313.2 243 68.3
Sed0006413 Sechium edule HOM05D001108 ORTHO05D005418 9.9e-83 310.8 243 67.1
Aqoxy1G02437 Aquilegia oxysepala HOM05D001108 ORTHO05D005418 2.2e-82 309.7 211 73.9
HanXRQChr06g0171311 Helianthus annuus HOM05D001108 ORTHO05D005418 2.9e-82 309.3 230 70.9
EL10Ac4g08320 Beta vulgaris HOM05D001108 ORTHO05D005418 3.8e-82 308.9 224 68.3
AUR62036092 Chenopodium quinoa HOM05D001108 ORTHO05D005418 4.9e-82 308.5 238 64.7
AUR62019549 Chenopodium quinoa HOM05D001108 ORTHO05D005418 1.1e-81 307.4 228 67.1
Rhsim06G0142500 Rhododendron simsii HOM05D001108 ORTHO05D005418 2.4e-81 306.2 195 77.4
Lsat_1_v5_gn_3_37280 Lactuca sativa HOM05D001108 ORTHO05D005418 4.2e-81 305.4 192 78.6
Dinv26419 Davidia involucrata HOM05D001108 ORTHO05D005418 5.4e-81 305.1 174 85.1
TWI75G0959 Tripterygium wilfordii HOM05D001108 ORTHO05D005418 9.3e-81 304.3 257 63.0
Gohir.A09G128300 Gossypium hirsutum HOM05D001108 ORTHO05D005418 1.2e-80 303.9 247 64.8
Cpa.g.sc34.160 Carica papaya HOM05D001108 ORTHO05D005418 2.1e-80 303.1 243 65.0
COL.COLO4_33977 Corchorus olitorius HOM05D001108 ORTHO05D005418 2.1e-80 303.1 238 66.0
Dinv23643 Davidia involucrata HOM05D001108 ORTHO05D005418 2.1e-80 303.1 174 85.6
ClCG02G017630 Citrullus lanatus HOM05D001108 ORTHO05D005418 3.5e-80 302.4 243 65.0
Lalb_Chr03g0029441 Lupinus albus HOM05D001108 ORTHO05D005418 3.5e-80 302.4 262 61.5
Manes.13G146800 Manihot esculenta HOM05D001108 ORTHO05D005418 3.5e-80 302.4 229 69.9
Lsat_1_v5_gn_4_70021 Lactuca sativa HOM05D001108 ORTHO05D005418 4.6e-80 302.0 227 69.2
Thecc.05G172000 Theobroma cacao HOM05D001108 ORTHO05D005418 4.6e-80 302.0 239 66.1
Atru.chr6.2997 Acer truncatum HOM05D001108 ORTHO05D005418 6.0e-80 301.6 251 64.9
Peaxi162Scf00132g00233 Petunia axillaris HOM05D001229 ORTHO05D005418 1.3e-79 300.4 202 74.8
Lj3g0011439 Lotus japonicus HOM05D001108 ORTHO05D005418 2.3e-79 299.7 224 68.8
CsaV3_6G013000 Cucumis sativus L. HOM05D001108 ORTHO05D005418 3.0e-79 299.3 220 69.5
MELO3C000760.2 Cucumis melo HOM05D001108 ORTHO05D005418 8.7e-79 297.7 219 68.9
CsaV3_6G012940 Cucumis sativus L. HOM05D001108 ORTHO05D005418 1.5e-78 297.0 219 68.9
RcHm_v2.0_Chr7g0232111 Rosa chinensis HOM05D001108 ORTHO05D005418 1.5e-78 297.0 221 69.2
VMungo1127G1775 Vigna mungo HOM05D001108 ORTHO05D005418 1.5e-78 297.0 231 67.1
CAN.G248.33 Capsicum annuum HOM05D001108 ORTHO05D005418 1.9e-78 296.6 239 67.8
CAN.G248.11 Capsicum annuum HOM05D001108 ORTHO05D005418 3.3e-78 295.8 182 79.7
Gohir.D09G124300 Gossypium hirsutum HOM05D001108 ORTHO05D005418 3.3e-78 295.8 247 63.2
Nitab4.5_0004071g0020 Nicotiana tabacum HOM05D001108 ORTHO05D005418 3.3e-78 295.8 189 76.7
Duzib093G1006 Durio zibethinus HOM05D001108 ORTHO05D005418 7.4e-78 294.7 186 77.4
Solyc07g054190.4 Solanum lycopersicum HOM05D001108 ORTHO05D005418 7.4e-78 294.7 254 64.6
arahy.Tifrunner.gnm1.ann1.85LIYI Arachis hypogaea HOM05D001108 ORTHO05D005418 9.6e-78 294.3 234 67.5
Gorai.006G143100 Gossypium raimondii HOM05D001108 ORTHO05D005418 9.6e-78 294.3 247 63.2
MSTRG.5628 Avicennia marina HOM05D001108 ORTHO05D005418 2.8e-77 292.7 224 70.5
Sopen07g028120 Solanum pennellii HOM05D001108 ORTHO05D005418 2.8e-77 292.7 254 64.2
HPP92_003131 Vanilla planifolia HOM05D001108 ORTHO05D005418 2.8e-77 292.7 230 67.8
Migut.C01348 Erythranthe guttata HOM05D001108 ORTHO05D005418 3.7e-77 292.4 213 72.3
Haze_13157 Corylus avellana HOM05D001108 ORTHO05D005418 4.8e-77 292.0 174 81.6
unitig_60.g25406 Utricularia gibba HOM05D001108 ORTHO05D005418 6.2e-77 291.6 199 75.4
Nitab4.5_0000512g0050 Nicotiana tabacum HOM05D001108 ORTHO05D005418 1.1e-76 290.8 189 75.7
AUR62002952 Chenopodium quinoa HOM05D001108 ORTHO05D005418 1.4e-76 290.4 209 71.8
Phvul.011G114100 Phaseolus vulgaris HOM05D001108 ORTHO05D005418 1.8e-76 290.0 224 66.5
arahy.Tifrunner.gnm1.ann1.SGC5R3 Arachis hypogaea HOM05D001108 ORTHO05D005418 5.3e-76 288.5 235 67.2
arahy.Tifrunner.gnm1.ann1.PPEG78 Arachis hypogaea HOM05D001108 ORTHO05D005418 1.2e-75 287.3 237 66.7
Glyma.12G112900 Glycine max HOM05D001108 ORTHO05D005418 1.2e-75 287.3 182 76.4
Medtr0004s0220 Medicago truncatula HOM05D001108 ORTHO05D005418 1.2e-75 287.3 226 65.9
Potri.013G131800 Populus trichocarpa HOM05D001108 ORTHO05D005418 1.5e-75 287.0 252 63.1
Potri.019G100500 Populus trichocarpa HOM05D001108 ORTHO05D005418 1.5e-75 287.0 192 75.0
Cfa017142 Carpinus fangiana HOM05D001108 ORTHO05D005418 2.0e-75 286.6 174 80.5
THA.LOC104824701 Tarenaya hassleriana HOM05D001108 ORTHO05D005418 2.0e-75 286.6 185 77.8
SalBow1G0161 Salvia bowleyana HOM05D001108 ORTHO05D005418 2.6e-75 286.2 194 74.7
CDE02G0464 Ceratophyllum demersum HOM05D001108 ORTHO05D005418 3.4e-75 285.8 174 81.0
Ca_20056_v3 Cicer arietinum L. HOM05D001108 ORTHO05D005418 3.4e-75 285.8 192 71.9
Medtr1g066930 Medicago truncatula HOM05D001108 ORTHO05D005418 3.4e-75 285.8 245 60.4
Sabra13G0111300 Salix brachista HOM05D001108 ORTHO05D005418 3.4e-75 285.8 241 64.7
FvH4_5g33380 Fragaria vesca HOM05D001108 ORTHO05D005418 7.6e-75 284.6 199 71.9
FAN04G2154 Fragaria x ananassa HOM05D001108 ORTHO05D005418 7.6e-75 284.6 199 71.9
FAN18G0425 Fragaria x ananassa HOM05D001108 ORTHO05D005418 7.6e-75 284.6 199 71.9
CDE09G0563 Ceratophyllum demersum HOM05D001108 ORTHO05D005418 9.9e-75 284.3 174 81.0
Sabra19G0110800 Salix brachista HOM05D001108 ORTHO05D005418 1.7e-74 283.5 224 67.0
Sabra19G0112200 Salix brachista HOM05D001108 ORTHO05D005418 1.7e-74 283.5 224 67.0
Eucgr.K01017 Eucalyptus grandis HOM05D001108 ORTHO05D005418 2.9e-74 282.7 234 65.0
Aqoxy1G02436 Aquilegia oxysepala HOM05D001108 ORTHO05D005418 3.8e-74 282.3 158 88.6
ECA246G0340 Erigeron canadensis HOM05D001108 ORTHO05D005418 3.8e-74 282.3 175 80.0
CARHR111330 Cardamine hirsuta HOM05D001108 ORTHO05D005418 4.9e-74 282.0 185 76.2
DCAR_013007 Daucus carota HOM05D001108 ORTHO05D005418 4.9e-74 282.0 175 78.9
Thhalv10002078m.g Eutrema salsugineum HOM05D001108 ORTHO05D005418 6.4e-74 281.6 212 68.4
Cpa.g.sc34.159 Carica papaya HOM05D001108 ORTHO05D005418 1.9e-73 280.0 226 61.5
Cc05_g07130 Coffea canephora HOM05D001108 ORTHO05D005418 1.9e-73 280.0 174 79.3
arahy.Tifrunner.gnm1.ann1.S0UG05 Arachis hypogaea HOM05D001108 ORTHO05D005418 2.5e-73 279.6 235 66.4
AL3G53780 Arabidopsis lyrata HOM05D001108 ORTHO05D005418 9.3e-73 277.7 185 75.1
BcaB03g16863 Brassica carinata HOM05D001108 ORTHO05D005418 9.3e-73 277.7 185 76.2
Duzib128G0360 Durio zibethinus HOM05D001108 ORTHO05D005418 9.3e-73 277.7 223 64.1
BcaC06g36761 Brassica carinata HOM05D001108 ORTHO05D005418 1.2e-72 277.3 185 75.7
C07p00210 Brassica napus HOM05D001108 ORTHO05D005418 1.2e-72 277.3 185 75.7
BolC7t40471H Brassica oleracea HOM05D001108 ORTHO05D005418 1.2e-72 277.3 185 75.7
AT2G20690 Arabidopsis thaliana HOM05D001108 ORTHO05D005418 2.7e-72 276.2 185 74.6
PGR142G4253 Punica granatum HOM05D001108 ORTHO05D005418 2.7e-72 276.2 241 61.8
AUR62007757 Chenopodium quinoa HOM05D001108 ORTHO05D005418 4.6e-72 275.4 201 70.1
Carub.0003s3520 Capsella rubella HOM05D001108 ORTHO05D005418 6.0e-72 275.0 210 69.0
SEGI_26411 Sequoiadendron giganteum HOM05D001108 ORTHO05D005418 1.0e-71 274.2 185 74.1
A07p00070 Brassica napus HOM05D001108 ORTHO05D005418 3.9e-71 272.3 197 71.6
PGSC0003DMG400018350 Solanum tuberosum HOM05D001108 ORTHO05D005418 8.7e-71 271.2 174 77.0
BraA07t27798Z Brassica rapa HOM05D001108 ORTHO05D005418 2.5e-70 269.6 197 71.1
Mapoly0026s0114 Marchantia polymorpha HOM05D001108 ORTHO05D005418 1.6e-69 266.9 184 71.2
Sp3g33940 Schrenkiella parvula HOM05D001108 ORTHO05D005418 1.1e-68 264.2 174 75.9
AagrBONN_evm.TU.Sc2ySwM_228.5414 Anthoceros agrestis HOM05D001108 ORTHO05D005418 1.4e-68 263.8 183 70.5
Pp3c2_19260 Physcomitrium patens HOM05D001108 ORTHO05D005418 1.4e-68 263.8 184 72.3
Lj1P722T15 Lonicera japonica HOM05D001108 ORTHO05D005418 1.8e-68 263.5 158 83.5
SGA_v2.0_scaffold92G28314 Striga asiatica HOM05D001108 ORTHO05D005418 5.3e-68 261.9 201 66.7
CBR_g36747 Chara braunii HOM05D001108 ORTHO05D005418 1.2e-67 260.8 183 69.9
SMO137G0361 Selaginella moellendorffii HOM05D001108 ORTHO05D005418 3.4e-67 259.2 182 70.9
Actinidia11036 Actinidia chinensis HOM05D001108 ORTHO05D005418 1.6e-64 250.4 158 77.8
Ah.04g164360 Amaranthus hybridus HOM05D001108 ORTHO05D005418 1.0e-63 247.7 224 58.9
CAN.G248.16 Capsicum annuum HOM05D001108 ORTHO05D005418 1.3e-63 247.3 165 74.5
CAN.G851.1 Capsicum annuum HOM05D001108 ORTHO05D005418 1.3e-63 247.3 165 74.5
ATR1096G056 Amborella trichopoda HOM05D001108 ORTHO05D005418 9.7e-62 241.1 185 65.4
Zm00001eb410410 Zea mays HOM05D001108 ORTHO05D005418 1.3e-58 230.7 210 56.7
Zm00001eb410210 Zea mays HOM05D001108 ORTHO05D005418 3.8e-58 229.2 211 56.4
Sabra19G0110900 Salix brachista HOM05D001108 ORTHO05D005418 9.7e-54 214.5 194 60.8
BcaC04g22783 Brassica carinata HOM05D001108 ORTHO05D005418 5.3e-52 208.8 165 68.5
Os12g0541000 Oryza sativa ssp. japonica HOM05D001108 ORTHO05D005418 5.3e-52 208.8 198 53.5
CANSAT80G2295 Cannabis sativa HOM05D001108 ORTHO05D005418 6.9e-52 208.4 131 76.3
HanXRQChr06g0169711 Helianthus annuus HOM05D001108 ORTHO05D005418 5.0e-50 202.2 224 54.5
MD09G1265300 Malus domestica HOM05D001108 ORTHO05D005418 3.3e-46 189.5 158 62.0
Psat4g001880 Pisum sativum HOM05D001108 ORTHO05D005418 7.7e-43 178.3 230 46.1
C09p15330 Brassica napus HOM05D001108 ORTHO05D005418 1.4e-41 174.1 174 56.9
Cfa026241 Carpinus fangiana HOM05D001108 ORTHO05D005418 3.7e-37 159.5 162 51.2
Pp3s30_1010 Physcomitrium patens HOM05D000723 ORTHO05D004839 5.3e-36 155.6 199 44.2
unitig_88.g27586 Utricularia gibba HOM05D001108 ORTHO05D005418 1.2e-35 154.5 86 83.7
FAN08G2132 Fragaria x ananassa HOM05D001108 ORTHO05D005418 1.3e-34 151.0 88 79.5
CAN.G362.18 Capsicum annuum HOM05D001108 ORTHO05D005418 1.5e-33 147.5 166 53.0
Lsat_1_v5_gn_4_42240 Lactuca sativa HOM05D001108 ORTHO05D005418 9.4e-33 144.8 87 79.3
HanXRQChr06g0169731 Helianthus annuus HOM05D001108 ORTHO05D005418 2.4e-28 130.2 68 89.7
Cfa014613 Carpinus fangiana HOM05D001108 ORTHO05D005418 8.5e-26 121.7 187 42.8
unitig_88.g27587 Utricularia gibba HOM05D001108 ORTHO05D005418 2.5e-25 120.2 93 69.9
PRCOL_00001102 Prasinoderma coloniale HOM05D001108 ORTHO05D005418 2.7e-24 116.7 192 37.0
CAN.G248.14 Capsicum annuum HOM05D001108 ORTHO05D005418 1.8e-23 114.0 70 75.7
Psat5g098840 Pisum sativum HOM05D001108 ORTHO05D005418 2.0e-22 110.5 116 52.6
MCO11G757 Micromonas commoda HOM05D001108 ORTHO05D005418 5.7e-22 109.0 182 38.5
Cre06.g296600 Chlamydomonas reinhardtii HOM05D001108 ORTHO05D005418 7.5e-22 108.6 182 38.5
Ca_28725_v3 Cicer arietinum L. HOM05D001108 ORTHO05D005418 2.0e-19 100.5 184 35.9
Psat5g097760 Pisum sativum HOM05D002292 ORTHO05D005418 3.3e-17 93.2 156 37.8
Medtr4g063470 Medicago truncatula HOM05D001108 ORTHO05D005418 1.8e-15 87.4 66 60.6
Lsat_1_v5_gn_8_150060 Lactuca sativa HOM05D001108 ORTHO05D005418 4.9e-13 79.3 65 60.0
AagrBONN_evm.TU.Sc2ySwM_228.459 Anthoceros agrestis HOM05D001108 ORTHO05D005418 2.4e-12 77.0 90 45.6
RcHm_v2.0_Chr2g0153941 Rosa chinensis HOM05D001108 ORTHO05D005418 4.1e-12 76.3 113 45.1


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