Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g06449 Nelumbo nucifera HOM05D007892 ORTHO05D009211 1.4e-266 922.5 507 100.0
TAR626G1218 Trochodendron aralioides HOM05D007892 ORTHO05D009211 1.6e-70 271.2 563 39.8
Dinv14936 Davidia involucrata HOM05D007892 ORTHO05D009211 1.0e-64 251.9 475 41.5
Dinv20199 Davidia involucrata HOM05D007892 ORTHO05D009211 2.0e-63 247.7 499 40.5
GSVIVG01014294001 Vitis vinifera HOM05D007892 ORTHO05D009211 2.2e-51 207.6 482 38.2
CSS0005747 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 5.2e-48 196.4 477 36.3
CSS0030192 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 2.0e-47 194.5 477 36.1
Haze_09454 Corylus avellana HOM05D007892 ORTHO05D009211 1.0e-40 172.2 504 37.7
Cfa020559 Carpinus fangiana HOM05D007892 ORTHO05D009211 2.3e-40 171.0 498 35.7
Thecc.07G095700 Theobroma cacao HOM05D007892 ORTHO05D009211 1.6e-33 148.3 544 31.8
COL.COLO4_36713 Corchorus olitorius HOM05D007892 ORTHO05D009211 3.0e-32 144.1 537 34.6
QL08p022727 Quercus lobata HOM05D007892 ORTHO05D009211 4.0e-32 143.7 530 33.8
CiPaw.11G172000 Carya illinoinensis HOM05D007892 ORTHO05D009211 5.2e-32 143.3 521 30.5
Glyma.12G226900 Glycine max HOM05D007892 ORTHO05D009211 5.2e-32 143.3 497 32.2
Rhsim06G0202400 Rhododendron simsii HOM05D007892 ORTHO05D009211 2.2e-30 137.9 481 31.4
Aqoxy1G02331 Aquilegia oxysepala HOM05D007892 ORTHO05D009211 6.3e-30 136.3 588 30.1
Actinidia09702 Actinidia chinensis HOM05D007892 ORTHO05D009211 1.8e-29 134.8 411 33.3
Prupe.4G176400 Prunus persica HOM05D007892 ORTHO05D009211 1.8e-29 134.8 500 30.4
RcHm_v2.0_Chr5g0032741 Rosa chinensis HOM05D007892 ORTHO05D009211 3.1e-29 134.0 410 32.2
FAN11G1893 Fragaria x ananassa HOM05D007892 ORTHO05D009211 4.1e-29 133.7 505 31.5
TWI38G1391 Tripterygium wilfordii HOM05D007892 ORTHO05D009211 5.4e-29 133.3 499 30.1
FvH4_3g19480 Fragaria vesca HOM05D007892 ORTHO05D009211 9.2e-29 132.5 500 31.0
FAN21G3246 Fragaria x ananassa HOM05D007892 ORTHO05D009211 1.6e-28 131.7 499 31.3
MD03G1231500 Malus domestica HOM05D007892 ORTHO05D009211 1.6e-28 131.7 502 30.1
FAN25G2763 Fragaria x ananassa HOM05D007892 ORTHO05D009211 2.0e-28 131.3 496 31.2
Lalb_Chr01g0016751 Lupinus albus HOM05D007892 ORTHO05D009211 3.5e-28 130.6 570 28.4
MD11G1252600 Malus domestica HOM05D007892 ORTHO05D009211 5.0e-27 126.7 516 30.8
Glyma.13G273900 Glycine max HOM05D007892 ORTHO05D009211 1.1e-26 125.6 500 30.8
Ciclev10007798m.g Citrus clementina HOM05D007892 ORTHO05D009211 1.9e-26 124.8 410 31.0
Lj3g0007189 Lotus japonicus HOM05D007892 ORTHO05D009211 3.3e-26 124.0 539 28.6
CANSAT56G4073 Cannabis sativa HOM05D007892 ORTHO05D009211 7.3e-26 122.9 477 29.8
VMungo0331G1677 Vigna mungo HOM05D007892 ORTHO05D009211 1.2e-25 122.1 489 30.7
Duzib213G0678 Durio zibethinus HOM05D007892 ORTHO05D009211 1.4e-24 118.6 573 30.0
FAN16G1540 Fragaria x ananassa HOM05D007892 ORTHO05D009211 4.0e-24 117.1 501 30.1
Ca_03530_v3 Cicer arietinum L. HOM05D007892 ORTHO05D009211 8.9e-24 115.9 556 27.0
Gohir.D01G048000 Gossypium hirsutum HOM05D007892 ORTHO05D009211 1.5e-23 115.2 514 30.0
vmacro11887 Vaccinium macrocarpon HOM05D007892 ORTHO05D009211 1.3e-22 112.1 475 30.1
Gorai.002G067800 Gossypium raimondii HOM05D007892 ORTHO05D009211 2.2e-22 111.3 535 29.5
Manes.15G089300 Manihot esculenta HOM05D007892 ORTHO05D009211 1.1e-21 109.0 527 27.5
Oeu037370.2 Olea europaea HOM05D007892 ORTHO05D009211 1.2e-20 105.5 480 28.1
Sc03g0010140 Simmondsia chinensis HOM05D007892 ORTHO05D009211 4.6e-20 103.6 409 31.5
ClCG11G017870 Citrullus lanatus HOM05D007892 ORTHO05D009211 5.9e-20 103.2 522 28.7
Potri.011G115900 Populus trichocarpa HOM05D007892 ORTHO05D009211 1.0e-19 102.4 528 29.2
Atru.chr2.2419 Acer truncatum HOM05D007892 ORTHO05D009211 3.0e-19 100.9 363 30.3
Medtr2g078660 Medicago truncatula HOM05D007892 ORTHO05D009211 3.9e-19 100.5 476 28.2
Sed0012696 Sechium edule HOM05D007892 ORTHO05D009211 3.9e-19 100.5 486 28.6
Duzib268G0896 Durio zibethinus HOM05D007892 ORTHO05D009211 5.0e-19 100.1 624 27.6
MELO3C025606.2 Cucumis melo HOM05D007892 ORTHO05D009211 2.5e-18 97.8 536 27.8
CsaV3_4G033500 Cucumis sativus L. HOM05D007892 ORTHO05D009211 3.3e-18 97.4 493 28.6
DCAR_019569 Daucus carota HOM05D007892 ORTHO05D009211 3.3e-18 97.4 396 29.3
Cc05_g11770 Coffea canephora HOM05D007892 ORTHO05D009211 4.3e-18 97.1 501 28.5
Duzib244G0002 Durio zibethinus HOM05D007892 ORTHO05D009211 4.3e-18 97.1 473 29.2
Eucgr.F01161 Eucalyptus grandis HOM05D007892 ORTHO05D009211 1.6e-17 95.1 518 27.0
Lj1A840G45 Lonicera japonica HOM05D007892 ORTHO05D009211 3.6e-17 94.0 427 26.2
PSO541G2379 Papaver somniferum HOM05D056025 ORTHO05D009211 4.7e-17 93.6 567 26.6
Phvul.010G112300 Phaseolus vulgaris HOM05D007892 ORTHO05D009211 1.8e-16 91.7 474 31.9
Gohir.A01G061400 Gossypium hirsutum HOM05D007892 ORTHO05D009211 2.3e-16 91.3 536 32.6
AUR62019468 Chenopodium quinoa HOM05D007892 ORTHO05D009211 6.8e-16 89.7 417 28.8
AUR62036164 Chenopodium quinoa HOM05D007892 ORTHO05D009211 1.2e-15 89.0 421 27.6
arahy.Tifrunner.gnm1.ann1.8Q202K Arachis hypogaea HOM05D007892 ORTHO05D009211 1.5e-15 88.6 570 26.1
Nitab4.5_0002330g0130 Nicotiana tabacum HOM05D021138 ORTHO05D009211 1.3e-14 85.5 514 25.7
Sabra11G0101600 Salix brachista HOM05D007892 ORTHO05D009211 8.3e-14 82.8 562 26.5
Psat0s3104g0160 Pisum sativum HOM05D007892 ORTHO05D009211 3.2e-13 80.9 476 25.2
Hund22811 Selenicereus undatus HOM05D007892 ORTHO05D009211 1.6e-12 78.6 417 27.1
PSO675G5502 Papaver somniferum HOM05D056025 ORTHO05D009211 2.3e-11 74.7 457 25.6
Peaxi162Scf00069g01735 Petunia axillaris HOM05D021138 ORTHO05D009211 8.6e-11 72.8 517 25.3
Potri.001G397001 Populus trichocarpa HOM05D007892 ORTHO05D009211 2.5e-10 71.2 507 26.8
Ah.06g184550 Amaranthus hybridus HOM05D007892 ORTHO05D009211 4.3e-10 70.5 427 27.4
Nitab4.5_0005017g0030 Nicotiana tabacum HOM05D021138 ORTHO05D009211 9.5e-10 69.3 513 25.0
Solyc07g062920.4 Solanum lycopersicum HOM05D021138 ORTHO05D009211 2.8e-09 67.8 522 24.5
ECA236G4021 Erigeron canadensis HOM05D000553 ORTHO05D009211 3.6e-09 67.4 336 33.3
Sopen07g031110 Solanum pennellii HOM05D021138 ORTHO05D009211 6.2e-09 66.6 517 24.4
PGSC0003DMG403012406 Solanum tuberosum HOM05D021138 ORTHO05D009211 4.0e-08 63.9 516 24.2
MSTRG.6820 Avicennia marina HOM05D007892 ORTHO05D009211 1.2e-07 62.4 399 27.6
EL10Ac4g08232 Beta vulgaris HOM05D007892 ORTHO05D009211 9.8e-07 59.3 426 27.0
THA.LOC104799933 Tarenaya hassleriana HOM05D012500 ORTHO05D009211 1.3e-06 58.9 268 27.6
HanXRQChr11g0351991 Helianthus annuus HOM05D007892 ORTHO05D009211 4.9e-06 57.0 469 25.8


User provided reference genes

Program Settings