Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g05976 Nelumbo nucifera HOM05D000923 ORTHO05D000720 8.9e-26 119.4 56 100.0
Nn6g31965 Nelumbo nucifera HOM05D000923 ORTHO05D000720 7.0e-15 83.2 40 95.0
Nn1g06196 Nelumbo nucifera HOM05D000923 ORTHO05D000720 1.2e-14 82.4 40 92.5
Nn3g19595 Nelumbo nucifera HOM05D000923 ORTHO05D000720 4.6e-14 80.5 40 90.0
Nn1g02686 Nelumbo nucifera HOM05D000923 ORTHO05D000720 2.3e-10 68.2 40 77.5
TAR636G1146 Trochodendron aralioides HOM05D000923 ORTHO05D000720 1.5e-09 65.5 40 67.5
TAR362G0558 Trochodendron aralioides HOM05D000923 ORTHO05D000720 2.2e-08 61.6 40 65.0
CANSAT78G1715 Cannabis sativa HOM05D000923 ORTHO05D000720 8.3e-08 59.7 49 55.1
TAR365G0145 Trochodendron aralioides HOM05D000923 ORTHO05D000720 8.3e-08 59.7 40 65.0
MD13G1209700 Malus domestica HOM05D000923 ORTHO05D000720 1.4e-07 58.9 53 54.7
GSVIVG01027723001 Vitis vinifera HOM05D000923 ORTHO05D000720 1.4e-07 58.9 39 66.7
CiPaw.01G188400 Carya illinoinensis HOM05D000923 ORTHO05D000720 3.2e-07 57.8 39 64.1
arahy.Tifrunner.gnm1.ann1.2H77W4 Arachis hypogaea HOM05D000923 ORTHO05D000720 9.2e-07 56.2 49 49.0
DCAR_002338 Daucus carota HOM05D000923 ORTHO05D000720 1.2e-06 55.8 51 56.9
CSS0044928 Camellia sinensis var. sinensis HOM05D000923 ORTHO05D000720 1.6e-06 55.5 49 57.1
arahy.Tifrunner.gnm1.ann1.NK5JY0 Arachis hypogaea HOM05D000923 ORTHO05D000720 2.7e-06 54.7 49 49.0
FAN22G0269 Fragaria x ananassa HOM05D000923 ORTHO05D000720 2.7e-06 54.7 49 51.0
Prupe.1G034300 Prunus persica HOM05D000923 ORTHO05D000720 3.5e-06 54.3 39 59.0
AUR62002259 Chenopodium quinoa HOM05D000923 ORTHO05D000720 4.6e-06 53.9 48 54.2
AUR62015476 Chenopodium quinoa HOM05D000923 ORTHO05D000720 4.6e-06 53.9 48 54.2
Eucgr.H03145 Eucalyptus grandis HOM05D000923 ORTHO05D000720 4.6e-06 53.9 49 53.1
FvH4_4g03030 Fragaria vesca HOM05D000923 ORTHO05D000720 7.8e-06 53.1 49 49.0
FAN12G3760 Fragaria x ananassa HOM05D000923 ORTHO05D000720 7.8e-06 53.1 49 49.0
Sed0026003 Sechium edule HOM05D000923 ORTHO05D000720 7.8e-06 53.1 39 59.0


User provided reference genes

Program Settings