Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g05893 Nelumbo nucifera HOM05D066907 ORTHO05D036848 6.6e-142 507.3 245 100.0
Nn1g09519 Nelumbo nucifera HOM05D066907 ORTHO05D036848 5.1e-17 92.4 122 36.1
Nn1g02005 Nelumbo nucifera HOM05D040337 ORTHO05D006738 2.9e-12 76.6 106 34.9
PSO063G1165 Papaver somniferum HOM05D008740 ORTHO05D006738 8.4e-12 75.1 102 35.3
PSO541G2695 Papaver somniferum HOM05D008740 ORTHO05D006738 8.4e-12 75.1 104 32.7
FvH4_6g51131 Fragaria vesca HOM05D000155 ORTHO05D000022 1.1e-11 74.7 104 35.6
PSO170G5740 Papaver somniferum HOM05D008740 ORTHO05D006738 1.4e-11 74.3 104 34.6
PSO761G0259 Papaver somniferum HOM05D008740 ORTHO05D006738 4.2e-11 72.8 107 32.7
PSO063G0655 Papaver somniferum HOM05D008740 ORTHO05D006738 2.7e-10 70.1 116 32.8
TWI73G0025 Tripterygium wilfordii HOM05D000003 ORTHO05D009135 3.5e-10 69.7 132 28.8
FvH4_6g24211 Fragaria vesca HOM05D011624 ORTHO05D014221 7.8e-10 68.6 126 34.9
PSO210G6357 Papaver somniferum HOM05D008740 ORTHO05D006738 1.0e-09 68.2 92 38.0
PSO339G1961 Papaver somniferum HOM05D008740 ORTHO05D006738 3.0e-09 66.6 97 35.1
PSO478G3230 Papaver somniferum HOM05D008740 ORTHO05D006738 3.0e-09 66.6 95 36.8
PSO782G4427 Papaver somniferum HOM05D000003 ORTHO05D000004 3.0e-09 66.6 97 34.0
PSO357G0702 Papaver somniferum HOM05D008740 ORTHO05D006738 6.6e-09 65.5 110 32.7
PSO541G3800 Papaver somniferum HOM05D008740 ORTHO05D006738 6.6e-09 65.5 97 35.1
PSO832G2737 Papaver somniferum HOM05D007919 ORTHO05D006738 8.7e-09 65.1 96 29.2
Aqoxy1G02332 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 1.5e-08 64.3 99 33.3
Nn8g40799 Nelumbo nucifera HOM05D040337 ORTHO05D006738 1.9e-08 63.9 98 32.7
PSO541G4554 Papaver somniferum HOM05D007919 ORTHO05D006738 3.3e-08 63.2 96 31.2
PSO832G1772 Papaver somniferum HOM05D007919 ORTHO05D006738 7.3e-08 62.0 118 27.1
Aqoxy1G03455 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 9.6e-08 61.6 116 31.9
Aqoxy3G00276 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 1.3e-07 61.2 99 34.3
FvH4_3g24991 Fragaria vesca HOM05D005989 ORTHO05D000022 1.3e-07 61.2 119 29.4
FvH4_5g35622 Fragaria vesca HOM05D000003 ORTHO05D014221 1.3e-07 61.2 110 30.9
FAN05G2878 Fragaria x ananassa HOM05D003297 ORTHO05D004027 1.3e-07 61.2 93 36.6
MBI06_g05819_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.3e-07 61.2 129 33.3
PSO339G5774 Papaver somniferum HOM05D007919 ORTHO05D006738 1.3e-07 61.2 157 28.7
PSO017G3608 Papaver somniferum HOM05D008740 ORTHO05D006738 2.1e-07 60.5 93 32.3
Aqoxy2G01964 Aquilegia oxysepala HOM05D000003 ORTHO05D006738 2.8e-07 60.1 81 37.0
CsaV3_1G011700 Cucumis sativus L. HOM05D000155 ORTHO05D000022 2.8e-07 60.1 116 27.6
PSO017G1214 Papaver somniferum HOM05D000003 ORTHO05D000004 2.8e-07 60.1 108 32.4
PSO675G0069 Papaver somniferum HOM05D000003 ORTHO05D001026 2.8e-07 60.1 117 29.9
BcaC09g51229 Brassica carinata HOM05D000155 ORTHO05D000022 3.6e-07 59.7 88 30.7
C01p15320 Brassica napus HOM05D000155 ORTHO05D000022 3.6e-07 59.7 88 30.7
BolC1t01486H Brassica oleracea HOM05D000155 ORTHO05D000022 3.6e-07 59.7 88 30.7
ECA234G2338 Erigeron canadensis HOM05D000774 ORTHO05D000602 3.6e-07 59.7 90 31.1
Sed0011096 Sechium edule HOM05D000155 ORTHO05D000022 3.6e-07 59.7 94 28.7
Actinidia26986 Actinidia chinensis HOM05D000774 ORTHO05D000602 4.8e-07 59.3 92 29.3
FvH4_5g08801 Fragaria vesca HOM05D000003 ORTHO05D000004 4.8e-07 59.3 108 31.5
A01p12730 Brassica napus HOM05D000155 ORTHO05D000022 6.2e-07 58.9 88 29.5
BraA01t01216Z Brassica rapa HOM05D000155 ORTHO05D000022 6.2e-07 58.9 88 29.5
TPR.G36747 Trifolium pratense HOM05D000155 ORTHO05D000022 6.2e-07 58.9 112 30.4
AUR62012503 Chenopodium quinoa HOM05D000155 ORTHO05D000022 8.1e-07 58.5 92 29.3
Lj1P1214T60 Lonicera japonica HOM05D000155 ORTHO05D000022 8.1e-07 58.5 85 34.1
PSO675G0876 Papaver somniferum HOM05D008740 ORTHO05D006738 8.1e-07 58.5 100 28.0
Prupe.3G133900 Prunus persica HOM05D000003 ORTHO05D000167 8.1e-07 58.5 77 40.3
Sc05g0008160 Simmondsia chinensis HOM05D000155 ORTHO05D000022 8.1e-07 58.5 92 31.5
EL10Ac3g05611 Beta vulgaris HOM05D000003 ORTHO05D000022 1.1e-06 58.2 86 36.0
AUR62014692 Chenopodium quinoa HOM05D000155 ORTHO05D000022 1.1e-06 58.2 92 30.4
Nn4g24897 Nelumbo nucifera HOM05D021400 ORTHO05D000007 1.1e-06 58.2 109 30.3
PSO384G1061 Papaver somniferum HOM05D007919 ORTHO05D006738 1.1e-06 58.2 124 26.6
Sed0026194 Sechium edule HOM05D000003 ORTHO05D000167 1.1e-06 58.2 129 28.7
Aqoxy5G00081 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 1.4e-06 57.8 82 37.8
FvH4_5g15581 Fragaria vesca HOM05D000003 ORTHO05D000022 1.4e-06 57.8 123 28.5
Lsat_1_v5_gn_4_58600 Lactuca sativa HOM05D000774 ORTHO05D000602 1.4e-06 57.8 92 30.4
Nn2g14989 Nelumbo nucifera HOM05D021400 ORTHO05D000022 1.4e-06 57.8 109 30.3
SGA_v2.0_scaffold7G03916 Striga asiatica HOM05D000155 ORTHO05D000022 1.4e-06 57.8 81 35.8
TWI32G0745 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.4e-06 57.8 98 31.6
FvH4_7g01171 Fragaria vesca HOM05D000003 ORTHO05D000004 1.8e-06 57.4 114 28.1
PGSC0003DMG400005085 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.8e-06 57.4 93 29.0
SGA_v2.0_scaffold7G03920 Striga asiatica HOM05D000155 ORTHO05D000022 1.8e-06 57.4 81 35.8
FvH4_5g33581 Fragaria vesca HOM05D008133 ORTHO05D009449 2.4e-06 57.0 109 31.2
MBI18_g07591_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 2.4e-06 57.0 96 38.5
PSO461G0002 Papaver somniferum HOM05D007919 ORTHO05D006738 2.4e-06 57.0 105 33.3
PSO478G2639 Papaver somniferum HOM05D008740 ORTHO05D006738 2.4e-06 57.0 97 30.9
PSO675G3299 Papaver somniferum HOM05D003407 ORTHO05D001026 2.4e-06 57.0 100 33.0
PSO724G0332 Papaver somniferum HOM05D008740 ORTHO05D006738 2.4e-06 57.0 113 26.5
MBI16_g10839_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.1e-06 56.6 135 30.4
PSO339G0361 Papaver somniferum HOM05D007919 ORTHO05D006738 3.1e-06 56.6 115 30.4
PGSC0003DMG400023605 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.1e-06 56.6 117 29.1
TWI38G0639 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 3.1e-06 56.6 93 35.5
FvH4_3g30492 Fragaria vesca HOM05D000003 ORTHO05D000022 4.0e-06 56.2 111 27.9
PSO724G1229 Papaver somniferum HOM05D007919 ORTHO05D006738 4.0e-06 56.2 116 31.0
COL.COLO4_31628 Corchorus olitorius HOM05D000774 ORTHO05D000602 5.3e-06 55.8 92 28.3
PSO339G5920 Papaver somniferum HOM05D007919 ORTHO05D006738 5.3e-06 55.8 99 34.3
MELO3C002549.2 Cucumis melo HOM05D000155 ORTHO05D000022 6.9e-06 55.5 94 27.7
Nn5g27380 Nelumbo nucifera HOM05D040337 ORTHO05D036848 6.9e-06 55.5 82 30.5
PSO782G1037 Papaver somniferum HOM05D000017 ORTHO05D000013 6.9e-06 55.5 125 26.4
CARHR228090 Cardamine hirsuta HOM05D000155 ORTHO05D000022 9.0e-06 55.1 82 29.3
AUR62036713 Chenopodium quinoa HOM05D000399 ORTHO05D000304 9.0e-06 55.1 86 37.2
Nn5g28166 Nelumbo nucifera HOM05D000155 ORTHO05D000022 9.0e-06 55.1 99 32.3
PSO017G3839 Papaver somniferum HOM05D007919 ORTHO05D006738 9.0e-06 55.1 130 26.2
PSO302G0021 Papaver somniferum HOM05D000003 ORTHO05D001026 9.0e-06 55.1 113 27.4
RcHm_v2.0_Chr3g0486471 Rosa chinensis HOM05D000003 ORTHO05D000022 9.0e-06 55.1 86 33.7


User provided reference genes

Program Settings