Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 7.3e-110 400.6 205 100.0
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 1.1e-38 164.1 202 52.5
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 2.2e-37 159.8 202 51.0
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 4.8e-37 158.7 185 50.3
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 5.3e-36 155.2 187 50.8
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 9.1e-36 154.5 187 48.1
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 4.5e-35 152.1 184 48.4
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 2.2e-34 149.8 185 47.6
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 2.2e-34 149.8 185 51.4
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 2.9e-34 149.4 185 47.6
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 9.4e-33 144.4 190 47.4
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 8.0e-32 141.4 184 47.8
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 1.8e-31 140.2 190 46.3
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 2.3e-31 139.8 221 43.0
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 6.7e-31 138.3 195 43.6
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 6.7e-31 138.3 185 45.9
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 8.8e-31 137.9 198 44.4
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 8.8e-31 137.9 195 43.6
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 1.5e-30 137.1 185 47.0
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 2.0e-30 136.7 185 47.6
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 5.7e-30 135.2 184 44.0
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 7.5e-30 134.8 186 44.1
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 1.7e-29 133.7 188 46.3
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 3.7e-29 132.5 185 46.5
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 6.3e-29 131.7 179 47.5
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 1.1e-28 131.0 185 43.2
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 1.1e-28 131.0 198 42.9
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 1.4e-28 130.6 184 42.4
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 2.4e-28 129.8 195 44.6
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 3.1e-28 129.4 192 41.7
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 4.1e-28 129.0 187 39.6
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 5.3e-28 128.6 186 44.1
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 2.7e-27 126.3 184 44.0
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 3.5e-27 125.9 195 43.1
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 1.7e-26 123.6 185 44.3
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 1.7e-26 123.6 185 42.2
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 1.7e-26 123.6 188 43.6
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 2.5e-25 119.8 196 41.8
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 2.5e-25 119.8 196 41.8
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 2.5e-25 119.8 185 43.2
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 2.5e-25 119.8 185 43.2
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 4.2e-25 119.0 183 42.1
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 7.2e-25 118.2 186 42.5
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 3.6e-24 115.9 175 43.4
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 2.6e-22 109.8 175 40.6
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 9.8e-22 107.8 186 40.3
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 4.8e-21 105.5 166 42.8
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 6.3e-21 105.1 195 39.5
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 9.1e-20 101.3 180 41.7
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 5.9e-19 98.6 181 38.1
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 1.0e-18 97.8 173 37.6
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 1.3e-18 97.4 128 43.8
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 5.0e-18 95.5 180 36.7
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 2.3e-15 86.7 105 43.8
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 3.0e-15 86.3 184 34.2
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 1.2e-14 84.3 203 37.9
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 4.4e-14 82.4 208 35.1
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 1.1e-12 77.8 191 31.9
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 1.5e-09 67.4 41 65.9
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 1.6e-08 63.9 93 45.2
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 4.7e-08 62.4 73 50.7


User provided reference genes

Program Settings