Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 0.0e+00 1374.4 721 100.0
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 2.5e-298 1028.5 734 75.9
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 4.0e-296 1021.1 721 75.5
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 2.4e-280 968.8 723 73.4
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 2.6e-279 965.3 721 72.7
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 3.8e-278 961.4 721 71.3
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 9.9e-271 936.8 724 70.4
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 7.9e-268 927.2 732 70.4
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 3.0e-267 925.2 721 70.7
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 3.3e-266 921.8 730 70.4
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 7.4e-266 920.6 733 69.2
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 1.4e-264 916.4 722 67.6
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 3.2e-261 905.2 722 66.9
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 5.5e-261 904.4 727 68.1
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 1.6e-260 902.9 727 69.6
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 3.5e-260 901.7 734 68.5
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 3.9e-259 898.3 726 66.7
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 1.9e-258 896.0 742 68.2
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 1.9e-258 896.0 722 68.7
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 1.3e-257 893.3 735 68.3
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 4.1e-256 888.3 723 66.4
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 2.6e-255 885.6 723 67.1
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 5.8e-255 884.4 722 68.8
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 7.6e-255 884.0 735 68.0
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 1.0e-254 883.6 721 66.3
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 1.0e-254 883.6 721 66.6
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.3e-254 883.2 722 68.7
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 1.7e-254 882.9 722 66.1
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 2.9e-254 882.1 724 67.4
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 3.8e-254 881.7 722 68.4
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 3.8e-254 881.7 722 66.5
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 5.0e-254 881.3 732 65.7
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 5.0e-254 881.3 725 68.0
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 6.5e-254 880.9 722 65.9
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 1.1e-253 880.2 727 65.5
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 2.5e-253 879.0 722 68.1
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 3.2e-253 878.6 724 67.5
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 5.5e-253 877.9 723 66.5
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 1.2e-252 876.7 722 65.8
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 2.1e-252 875.9 722 67.9
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 2.1e-252 875.9 731 64.6
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 3.9e-251 871.7 720 66.8
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 1.5e-250 869.8 722 66.1
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 8.2e-249 864.0 732 64.5
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 1.1e-248 863.6 724 64.8
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 1.5e-247 859.8 723 65.7
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 4.2e-245 851.7 724 64.8
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 7.2e-245 850.9 722 65.5
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 2.7e-244 849.0 730 65.6
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 7.9e-244 847.4 724 64.6
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 5.1e-243 844.7 722 65.2
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.5e-242 843.2 724 64.2
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 2.0e-242 842.8 726 64.5
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 2.0e-242 842.8 947 54.7
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 4.3e-242 841.6 742 64.6
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 2.2e-241 839.3 721 65.0
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 8.2e-241 837.4 731 63.9
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 4.1e-240 835.1 729 65.4
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 1.0e-238 830.5 735 63.5
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 1.1e-237 827.0 726 65.4
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 1.9e-237 826.2 807 59.0
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 3.2e-237 825.5 730 65.3
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 4.2e-237 825.1 724 63.0
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 9.4e-237 823.9 728 64.6
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 7.9e-236 820.8 736 62.2
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 2.6e-234 815.8 729 63.0
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 3.3e-234 815.5 637 68.8
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 5.7e-234 814.7 721 65.5
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 6.3e-233 811.2 724 64.5
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 1.8e-232 809.7 733 63.2
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 4.1e-232 808.5 733 62.9
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 2.0e-231 806.2 730 62.9
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 3.2e-229 798.9 761 60.4
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 5.5e-229 798.1 732 62.2
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 4.0e-227 792.0 725 61.0
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 4.8e-225 785.0 931 52.5
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 1.4e-224 783.5 719 62.0
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 2.4e-224 782.7 711 62.2
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 2.0e-223 779.6 723 62.7
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 4.7e-220 768.5 726 62.0
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 4.4e-218 761.9 777 56.8
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 2.8e-217 759.2 732 57.0
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 1.8e-216 756.5 728 57.3
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 7.2e-213 744.6 595 69.1
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 2.0e-210 736.5 729 56.9
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 2.8e-209 732.6 729 56.5
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 6.3e-209 731.5 735 57.1
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 1.8e-208 729.9 730 56.7
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 5.4e-208 728.4 729 56.2
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 3.5e-207 725.7 735 56.6
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 5.9e-207 724.9 733 56.6
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 1.9e-205 719.9 735 56.7
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 3.6e-204 715.7 753 54.4
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 1.4e-203 713.8 730 55.5
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 6.4e-201 704.9 752 56.9
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 7.8e-199 698.0 583 67.8
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 8.0e-196 688.0 639 59.9
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 7.0e-192 674.9 623 60.2
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 6.0e-191 671.8 599 62.9
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 1.0e-190 671.0 561 65.4
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 6.4e-185 651.7 718 53.6
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 1.2e-172 610.9 603 60.2
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 7.6e-170 601.7 543 60.0
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 6.2e-164 582.0 604 54.8
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 1.3e-145 521.2 531 57.6
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 2.2e-132 477.2 774 41.6
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 6.9e-131 472.2 799 39.3
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 1.7e-116 424.5 723 37.3
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 3.0e-102 377.1 296 68.6
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 2.0e-101 374.4 272 71.7
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 1.1e-99 368.6 448 50.0
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 7.0e-99 365.9 468 50.2
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 7.3e-80 302.8 437 45.3
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 4.0e-70 270.4 315 53.0
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 3.9e-65 253.8 181 71.8
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 9.2e-59 232.6 192 64.6
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 8.1e-55 219.5 370 42.4
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 4.4e-53 213.8 294 46.3
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 2.5e-48 198.0 153 73.9
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 5.3e-46 190.3 154 63.6
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 8.1e-39 166.4 127 77.2
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 1.4e-38 165.6 95 88.4
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 1.8e-38 165.2 133 73.7
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 2.1e-34 151.8 107 75.7
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 3.5e-34 151.0 126 69.0
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 2.5e-24 118.2 109 56.9
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 3.3e-24 117.9 110 57.3
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 1.5e-21 109.0 144 50.0
Cre01.g029050 Chlamydomonas reinhardtii HOM05D003178 ORTHO05D003636 1.1e-06 59.7 137 32.1
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.1e-06 59.7 51 58.8


User provided reference genes

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