Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g05821 Nelumbo nucifera HOM05D001619 ORTHO05D001541 1.2e-70 269.6 128 100.0
Nn2g12623 Nelumbo nucifera HOM05D001619 ORTHO05D001541 2.7e-14 82.4 45 91.1
Nn8g40372 Nelumbo nucifera HOM05D001619 ORTHO05D001541 2.0e-12 76.3 45 82.2
Ah.01g024700 Amaranthus hybridus HOM05D001619 ORTHO05D001541 5.4e-10 68.2 46 73.9
CANSAT25G1622 Cannabis sativa HOM05D001619 ORTHO05D001541 5.4e-10 68.2 46 71.7
Dinv31986 Davidia involucrata HOM05D001619 ORTHO05D001541 7.0e-10 67.8 44 75.0
Potri.001G243100 Populus trichocarpa HOM05D001619 ORTHO05D001541 7.0e-10 67.8 40 77.5
Sabra16G0147500 Salix brachista HOM05D001619 ORTHO05D001541 7.0e-10 67.8 40 77.5
EL10Ac1g01875 Beta vulgaris HOM05D001619 ORTHO05D001541 1.2e-09 67.0 46 71.7
Hund05726 Selenicereus undatus HOM05D001619 ORTHO05D001541 1.2e-09 67.0 46 69.6
CiPaw.07G133900 Carya illinoinensis HOM05D001619 ORTHO05D001541 1.6e-09 66.6 46 63.0
Rhsim06G0003500 Rhododendron simsii HOM05D001619 ORTHO05D001541 2.7e-09 65.9 47 70.2
AUR62024098 Chenopodium quinoa HOM05D001619 ORTHO05D001541 3.5e-09 65.5 46 69.6
AUR62035168 Chenopodium quinoa HOM05D001619 ORTHO05D001541 3.5e-09 65.5 46 69.6
Hma1.2p1_0489F.1_g164070 Hydrangea macrophylla HOM05D001619 ORTHO05D001541 3.5e-09 65.5 44 72.7
CSS0036456 Camellia sinensis var. sinensis HOM05D001619 ORTHO05D001541 5.9e-09 64.7 44 70.5
CANSAT78G1558 Cannabis sativa HOM05D001619 ORTHO05D001541 5.9e-09 64.7 44 65.9
Ciclev10002801m.g Citrus clementina HOM05D001619 ORTHO05D001541 5.9e-09 64.7 41 75.6
QL02p015706 Quercus lobata HOM05D001619 ORTHO05D001541 5.9e-09 64.7 41 68.3
Sc02g0009270 Simmondsia chinensis HOM05D001619 ORTHO05D001541 7.7e-09 64.3 45 68.9
Actinidia15521 Actinidia chinensis HOM05D001619 ORTHO05D001541 1.0e-08 63.9 44 65.9
Cfa014133 Carpinus fangiana HOM05D001619 ORTHO05D001541 1.3e-08 63.5 40 77.5
Sabra02G0003800 Salix brachista HOM05D001619 ORTHO05D001541 1.3e-08 63.5 46 58.7
vmacro21770 Vaccinium macrocarpon HOM05D001619 ORTHO05D001541 1.3e-08 63.5 44 70.5
Actinidia17072 Actinidia chinensis HOM05D001619 ORTHO05D001541 1.7e-08 63.2 44 68.2
Haze_22858 Corylus avellana HOM05D001619 ORTHO05D001541 1.7e-08 63.2 40 75.0
Gohir.D01G087200 Gossypium hirsutum HOM05D001619 ORTHO05D001541 1.7e-08 63.2 41 73.2
Gorai.002G113200 Gossypium raimondii HOM05D001619 ORTHO05D001541 1.7e-08 63.2 41 73.2
Hma1.2p1_0489F.1_g164060 Hydrangea macrophylla HOM05D001619 ORTHO05D001541 1.7e-08 63.2 44 70.5
MBI01_g17252_MAGBIO Magnolia biondii HOM05D001619 ORTHO05D001541 1.7e-08 63.2 41 73.2
CSS0038223 Camellia sinensis var. sinensis HOM05D001619 ORTHO05D001541 2.2e-08 62.8 47 68.1
Cpa.g.sc286.14 Carica papaya HOM05D001619 ORTHO05D001541 2.2e-08 62.8 41 70.7
Manes.05G127400 Manihot esculenta HOM05D001619 ORTHO05D001541 2.2e-08 62.8 41 65.9
Cc10_g13010 Coffea canephora HOM05D001619 ORTHO05D001541 2.9e-08 62.4 41 68.3
DCAR_013941 Daucus carota HOM05D001619 ORTHO05D001541 3.8e-08 62.0 38 73.7
Sabra11G0071400 Salix brachista HOM05D001619 ORTHO05D001541 3.8e-08 62.0 46 56.5
Solyc04g082740.4 Solanum lycopersicum HOM05D001619 ORTHO05D001541 5.0e-08 61.6 40 72.5
Cpa.g.sc286.13 Carica papaya HOM05D001619 ORTHO05D001541 6.5e-08 61.2 41 63.4
MD09G1270300 Malus domestica HOM05D001619 ORTHO05D001541 6.5e-08 61.2 42 59.5
BcaB07g32082 Brassica carinata HOM05D001619 ORTHO05D001541 8.5e-08 60.8 41 65.9
Gohir.A01G102100 Gossypium hirsutum HOM05D001619 ORTHO05D001541 8.5e-08 60.8 41 70.7
Lj6g0027296 Lotus japonicus HOM05D001619 ORTHO05D001541 8.5e-08 60.8 41 65.9
Migut.C00358 Erythranthe guttata HOM05D001619 ORTHO05D001541 1.1e-07 60.5 38 76.3
FvH4_5g26010 Fragaria vesca HOM05D001619 ORTHO05D001541 1.1e-07 60.5 36 75.0
FAN04G3031 Fragaria x ananassa HOM05D001619 ORTHO05D001541 1.1e-07 60.5 36 75.0
FAN13G2253 Fragaria x ananassa HOM05D001619 ORTHO05D001541 1.1e-07 60.5 36 75.0
Peaxi162Scf00680g00633 Petunia axillaris HOM05D001619 ORTHO05D001541 1.1e-07 60.5 41 70.7
Sopen04g036370 Solanum pennellii HOM05D001619 ORTHO05D001541 1.1e-07 60.5 40 72.5
PGSC0003DMG402009997 Solanum tuberosum HOM05D001619 ORTHO05D001541 1.1e-07 60.5 40 72.5
Lalb_Chr15g0090631 Lupinus albus HOM05D001619 ORTHO05D001541 1.5e-07 60.1 39 71.8
QL02p015688 Quercus lobata HOM05D001619 ORTHO05D001541 1.5e-07 60.1 40 67.5
Aa31LG7G5030 Aethionema arabicum HOM05D001619 ORTHO05D001541 1.9e-07 59.7 36 72.2
COL.COLO4_12314 Corchorus olitorius HOM05D001619 ORTHO05D001541 1.9e-07 59.7 42 61.9
Medtr2g081050 Medicago truncatula HOM05D001619 ORTHO05D001541 1.9e-07 59.7 36 75.0
Nitab4.5_0001756g0060 Nicotiana tabacum HOM05D001619 ORTHO05D001541 1.9e-07 59.7 38 76.3
Peaxi162Scf00680g00639 Petunia axillaris HOM05D001619 ORTHO05D001541 1.9e-07 59.7 38 76.3
ClCG08G009210 Citrullus lanatus HOM05D001619 ORTHO05D001541 2.5e-07 59.3 36 72.2
MELO3C026520.2 Cucumis melo HOM05D001619 ORTHO05D001541 2.5e-07 59.3 36 72.2
CsaV3_6G031340 Cucumis sativus L. HOM05D001619 ORTHO05D001541 2.5e-07 59.3 36 72.2
FAN08G3113 Fragaria x ananassa HOM05D001619 ORTHO05D001541 2.5e-07 59.3 36 75.0
Manes.18G001156 Manihot esculenta HOM05D001619 ORTHO05D001541 2.5e-07 59.3 38 76.3
RcHm_v2.0_Chr7g0216621 Rosa chinensis HOM05D001619 ORTHO05D001541 2.5e-07 59.3 36 72.2
Sed0004718 Sechium edule HOM05D001619 ORTHO05D001541 2.5e-07 59.3 36 72.2
TPR.G32875 Trifolium pratense HOM05D001619 ORTHO05D001541 2.5e-07 59.3 36 72.2
Ca_01803_v3 Cicer arietinum L. HOM05D001619 ORTHO05D001541 3.2e-07 58.9 36 72.2
Ca_30470_v3 Cicer arietinum L. HOM05D001619 ORTHO05D001541 3.2e-07 58.9 36 72.2
Lj4A5T44 Lonicera japonica HOM05D001619 ORTHO05D001541 3.2e-07 58.9 44 65.9
Oeu004547.1 Olea europaea HOM05D001619 ORTHO05D001541 3.2e-07 58.9 44 68.2
Phvul.006G213300 Phaseolus vulgaris HOM05D001619 ORTHO05D001541 3.2e-07 58.9 39 59.0
Atru.chr13.66 Acer truncatum HOM05D001619 ORTHO05D001541 4.2e-07 58.5 41 63.4
BcaB03g14297 Brassica carinata HOM05D001619 ORTHO05D001541 4.2e-07 58.5 40 65.0
BcaC05g25994 Brassica carinata HOM05D001619 ORTHO05D001541 4.2e-07 58.5 33 75.8
C05p19470 Brassica napus HOM05D001619 ORTHO05D001541 4.2e-07 58.5 33 75.8
ECA233G5749 Erigeron canadensis HOM05D001619 ORTHO05D001541 4.2e-07 58.5 43 65.1
Thhalv10019300m.g Eutrema salsugineum HOM05D001619 ORTHO05D001541 4.2e-07 58.5 36 72.2
Oeu019578.1 Olea europaea HOM05D001619 ORTHO05D001541 4.2e-07 58.5 36 72.2
Sabra05G0198400 Salix brachista HOM05D001619 ORTHO05D001541 4.2e-07 58.5 45 64.4
GSVIVG01013423001 Vitis vinifera HOM05D001619 ORTHO05D001541 4.2e-07 58.5 43 60.5
AT1G76440 Arabidopsis thaliana HOM05D001619 ORTHO05D001541 5.5e-07 58.2 36 69.4
Medtr2g007290 Medicago truncatula HOM05D001619 ORTHO05D001541 5.5e-07 58.2 36 72.2
CDE06G0475 Ceratophyllum demersum HOM05D001619 ORTHO05D001541 7.2e-07 57.8 54 53.7
Oeu049863.1 Olea europaea HOM05D001619 ORTHO05D001541 7.2e-07 57.8 44 65.9
TWI31G0455 Tripterygium wilfordii HOM05D001619 ORTHO05D001541 7.2e-07 57.8 36 72.2
VMungo0540G2057 Vigna mungo HOM05D001619 ORTHO05D001541 7.2e-07 57.8 33 72.7
CAN.G1330.8 Capsicum annuum HOM05D001619 ORTHO05D001541 9.4e-07 57.4 37 73.0
Prupe.5G005900 Prunus persica HOM05D001619 ORTHO05D001541 9.4e-07 57.4 36 69.4
Prupe.5G006000 Prunus persica HOM05D001619 ORTHO05D001541 9.4e-07 57.4 42 64.3
Sp1g18570 Schrenkiella parvula HOM05D001619 ORTHO05D001541 9.4e-07 57.4 35 68.6
arahy.Tifrunner.gnm1.ann1.7DN31D Arachis hypogaea HOM05D001619 ORTHO05D001541 1.2e-06 57.0 36 66.7
arahy.Tifrunner.gnm1.ann1.X04J1J Arachis hypogaea HOM05D001619 ORTHO05D001541 1.2e-06 57.0 36 66.7
BcaC06g34840 Brassica carinata HOM05D001619 ORTHO05D001541 1.2e-06 57.0 40 62.5
BolC7t42812H Brassica oleracea HOM05D001619 ORTHO05D001541 1.2e-06 57.0 40 62.5
CSS0007678 Camellia sinensis var. sinensis HOM05D001619 ORTHO05D001541 1.2e-06 57.0 40 62.5
CSS0010193 Camellia sinensis var. sinensis HOM05D001619 ORTHO05D001541 1.2e-06 57.0 40 62.5
Ciclev10001358m.g Citrus clementina HOM05D001619 ORTHO05D001541 1.2e-06 57.0 40 62.5
Dinv05500 Davidia involucrata HOM05D001619 ORTHO05D001541 1.2e-06 57.0 37 70.3
Glyma.08G185200 Glycine max HOM05D001619 ORTHO05D001541 1.2e-06 57.0 36 69.4
Glyma.15G047500 Glycine max HOM05D001619 ORTHO05D001541 1.2e-06 57.0 36 69.4
HanXRQChr08g0216181 Helianthus annuus HOM05D001619 ORTHO05D001541 1.2e-06 57.0 43 65.1
Oeu013566.1 Olea europaea HOM05D001619 ORTHO05D001541 1.2e-06 57.0 36 72.2
Solyc04g082720.3 Solanum lycopersicum HOM05D001619 ORTHO05D001541 1.2e-06 57.0 37 75.7
Sopen04g036350 Solanum pennellii HOM05D001619 ORTHO05D001541 1.2e-06 57.0 37 75.7
BcaC08g47245 Brassica carinata HOM05D001619 ORTHO05D001541 1.6e-06 56.6 36 69.4
C06p50670 Brassica napus HOM05D001619 ORTHO05D001541 1.6e-06 56.6 36 69.4
C07p22750 Brassica napus HOM05D001619 ORTHO05D001541 1.6e-06 56.6 39 64.1
BolC6t40093H Brassica oleracea HOM05D001619 ORTHO05D001541 1.6e-06 56.6 36 69.4
CAN.G1330.9 Capsicum annuum HOM05D001619 ORTHO05D001541 1.6e-06 56.6 38 68.4
Psat5g246760 Pisum sativum HOM05D001619 ORTHO05D001541 1.6e-06 56.6 36 66.7
AT1G20870 Arabidopsis thaliana HOM05D001619 ORTHO05D001541 2.1e-06 56.2 36 66.7
CiPaw.07G134000 Carya illinoinensis HOM05D001619 ORTHO05D001541 2.1e-06 56.2 36 69.4
Carub.0002s2335 Capsella rubella HOM05D001619 ORTHO05D001541 2.7e-06 55.8 36 66.7
Rhsim13G0221500 Rhododendron simsii HOM05D001619 ORTHO05D001541 2.7e-06 55.8 36 66.7
TAR381G0513 Trochodendron aralioides HOM05D001619 ORTHO05D001541 2.7e-06 55.8 28 85.7
AL2G36570 Arabidopsis lyrata HOM05D001619 ORTHO05D001541 3.6e-06 55.5 36 66.7
A07p42100 Brassica napus HOM05D001619 ORTHO05D001541 3.6e-06 55.5 36 66.7
BraA07t31739Z Brassica rapa HOM05D001619 ORTHO05D001541 3.6e-06 55.5 36 66.7
Thhalv10007660m.g Eutrema salsugineum HOM05D001619 ORTHO05D001541 3.6e-06 55.5 40 62.5
MD06G1004600 Malus domestica HOM05D001619 ORTHO05D001541 3.6e-06 55.5 36 69.4
Sp5g31600 Schrenkiella parvula HOM05D001619 ORTHO05D001541 3.6e-06 55.5 36 66.7
PGSC0003DMG400009996 Solanum tuberosum HOM05D001619 ORTHO05D001541 3.6e-06 55.5 37 73.0
THA.LOC104812004 Tarenaya hassleriana HOM05D001619 ORTHO05D001541 3.6e-06 55.5 36 66.7
ATR0605G226 Amborella trichopoda HOM05D001619 ORTHO05D001541 4.7e-06 55.1 43 55.8
AL1G33890 Arabidopsis lyrata HOM05D001619 ORTHO05D001541 4.7e-06 55.1 36 63.9
CSS0039453 Camellia sinensis var. sinensis HOM05D001619 ORTHO05D001541 4.7e-06 55.1 36 69.4
Carub.0001s2034 Capsella rubella HOM05D001619 ORTHO05D001541 4.7e-06 55.1 34 70.6
CARHR021300 Cardamine hirsuta HOM05D001619 ORTHO05D001541 4.7e-06 55.1 34 70.6
CDE08G0732 Ceratophyllum demersum HOM05D001619 ORTHO05D001541 4.7e-06 55.1 56 44.6
Lsat_1_v5_gn_8_27500 Lactuca sativa HOM05D001619 ORTHO05D001541 4.7e-06 55.1 43 62.8
SEGI_32397 Sequoiadendron giganteum HOM05D001619 ORTHO05D001541 4.7e-06 55.1 44 56.8
Actinidia16332 Actinidia chinensis HOM05D001619 ORTHO05D001541 6.1e-06 54.7 45 60.0
A06p16870 Brassica napus HOM05D001619 ORTHO05D001541 6.1e-06 54.7 36 66.7
BraA06t24796Z Brassica rapa HOM05D001619 ORTHO05D001541 8.0e-06 54.3 35 68.6
MD17G1268400 Malus domestica HOM05D001619 ORTHO05D001541 8.0e-06 54.3 48 58.3
Pp3c18_5240 Physcomitrium patens HOM05D001619 ORTHO05D001541 8.0e-06 54.3 40 65.0
THA.LOC104809894 Tarenaya hassleriana HOM05D001619 ORTHO05D001541 8.0e-06 54.3 35 68.6


User provided reference genes

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