Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 2.9e-276 954.5 452 100.0
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 2.4e-190 669.1 427 73.1
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 1.1e-185 653.7 414 73.4
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 4.6e-181 638.3 415 70.8
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 3.9e-180 635.2 413 71.7
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 1.2e-178 630.2 399 71.9
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 2.4e-177 625.9 406 70.9
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 2.6e-176 622.5 407 70.3
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 1.4e-174 616.7 428 67.3
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 4.1e-174 615.1 396 71.0
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 6.0e-173 611.3 409 67.2
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 1.3e-172 610.1 400 70.0
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 8.7e-172 607.4 396 69.7
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 2.5e-171 605.9 390 71.0
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 8.1e-170 600.9 397 70.0
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 2.0e-168 596.3 397 67.3
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 2.6e-168 595.9 410 66.3
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 9.9e-168 594.0 408 67.6
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 7.1e-166 587.8 396 67.4
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 3.9e-164 582.0 404 65.6
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 1.9e-163 579.7 404 64.1
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 2.5e-163 579.3 394 67.3
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 7.3e-163 577.8 404 65.6
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 9.6e-163 577.4 398 64.6
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 9.6e-163 577.4 410 64.9
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 1.3e-162 577.0 418 64.4
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 3.6e-162 575.5 414 62.8
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 6.2e-162 574.7 397 68.0
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 1.4e-161 573.5 399 64.7
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 5.3e-161 571.6 401 64.8
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 9.0e-161 570.9 409 64.8
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 9.0e-161 570.9 399 64.9
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 5.8e-160 568.2 399 63.9
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 5.8e-160 568.2 398 64.3
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 7.6e-160 567.8 425 62.1
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 7.6e-160 567.8 394 66.5
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 1.3e-159 567.0 398 64.1
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 2.2e-159 566.2 410 62.9
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 2.9e-159 565.8 404 64.4
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 3.8e-159 565.5 456 61.2
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 8.4e-159 564.3 399 64.9
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 2.4e-158 562.8 397 64.5
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 1.6e-157 560.1 393 63.9
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 4.6e-157 558.5 404 65.8
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 1.3e-156 557.0 397 64.2
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 1.9e-155 553.1 410 62.0
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 1.9e-155 553.1 397 63.7
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 3.3e-155 552.4 402 63.7
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 4.3e-155 552.0 395 62.3
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 7.4e-155 551.2 446 57.6
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 1.3e-154 550.4 404 62.6
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 1.3e-154 550.4 404 62.6
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 2.8e-154 549.3 372 67.2
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 2.8e-154 549.3 383 64.2
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 4.8e-154 548.5 404 63.1
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 6.2e-154 548.1 395 63.0
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 6.2e-154 548.1 395 63.0
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 8.1e-154 547.7 408 61.8
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 1.1e-153 547.4 398 64.6
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 5.8e-152 541.6 397 64.5
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 5.8e-152 541.6 400 64.2
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 7.6e-152 541.2 353 68.8
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 2.9e-151 539.3 378 63.5
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 3.2e-150 535.8 385 63.9
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 5.5e-150 535.0 381 61.7
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 3.5e-149 532.3 428 57.9
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 3.5e-149 532.3 403 61.0
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 4.6e-149 531.9 413 59.3
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 7.9e-149 531.2 421 60.1
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 5.1e-148 528.5 441 56.2
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 3.3e-147 525.8 411 59.6
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 5.6e-147 525.0 359 68.0
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 2.8e-146 522.7 380 63.9
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 3.7e-146 522.3 350 71.4
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 4.8e-146 521.9 362 67.4
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 5.8e-144 515.0 404 59.7
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 8.4e-143 511.1 458 53.9
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 1.1e-142 510.8 350 68.0
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 1.0e-140 504.2 406 59.4
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 1.6e-133 480.3 425 54.6
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 5.1e-132 475.3 467 52.0
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 9.7e-131 471.1 350 60.6
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 5.9e-128 461.8 369 61.8
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.1e-126 457.6 341 64.8
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 3.6e-125 452.6 287 72.8
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 6.1e-125 451.8 403 56.8
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 4.5e-120 435.6 403 55.3
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 4.5e-112 409.1 320 59.1
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 1.4e-108 397.5 397 49.9
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 7.2e-102 375.2 254 68.5
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 1.2e-101 374.4 398 46.5
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 8.6e-95 351.7 298 57.7
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 5.5e-94 349.0 251 65.3
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 5.2e-92 342.4 363 44.9
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 3.4e-91 339.7 429 45.2
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 2.2e-90 337.0 213 70.0
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 3.8e-87 326.2 409 40.3
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 2.8e-85 320.1 380 42.9
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 1.5e-83 314.3 379 42.5
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 1.6e-80 304.3 393 43.0
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 3.1e-76 290.0 390 41.3
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 3.9e-71 273.1 203 60.6
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 2.3e-68 263.8 178 66.9
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 3.5e-64 250.0 221 57.0
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 1.3e-58 231.5 212 51.4
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 1.7e-58 231.1 204 52.0
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 1.1e-54 218.4 154 63.6
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 1.9e-49 201.1 137 67.9
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 3.9e-47 193.4 296 40.2
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 4.8e-45 186.4 129 64.3
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 8.1e-45 185.7 294 37.4
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 1.1e-44 185.3 119 68.1
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 7.4e-38 162.5 97 74.2
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 4.9e-34 149.8 107 65.4
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 2.4e-28 131.0 136 46.3
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 1.2e-24 118.6 118 48.3
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 7.4e-22 109.4 107 50.5
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 3.6e-16 90.5 79 53.2
Pp3c26_9360 Physcomitrium patens HOM05D006805 ORTHO05D008656 1.1e-12 79.0 131 38.2
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 6.5e-10 69.7 42 73.8


User provided reference genes

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