Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g05570 Nelumbo nucifera HOM05D005623 ORTHO05D007130 8.6e-235 816.6 414 100.0
MBI16_g12463_MAGBIO Magnolia biondii HOM05D005623 ORTHO05D007130 1.2e-95 354.4 233 73.8
MBI04_g11706_MAGBIO Magnolia biondii HOM05D005623 ORTHO05D007130 1.1e-80 304.7 205 70.2
TAR624G0131 Trochodendron aralioides HOM05D005623 ORTHO05D007130 3.2e-80 303.1 210 68.6
GSVIVG01015237001 Vitis vinifera HOM05D005623 ORTHO05D007130 7.1e-80 302.0 210 67.1
PSO210G3522 Papaver somniferum HOM05D005623 ORTHO05D007130 1.3e-78 297.7 216 65.3
Thecc.09G093300 Theobroma cacao HOM05D005623 ORTHO05D007130 1.3e-78 297.7 214 65.4
Nn8g38917 Nelumbo nucifera HOM05D005623 ORTHO05D007130 1.9e-77 293.9 206 68.0
Gohir.D06G069700 Gossypium hirsutum HOM05D005623 ORTHO05D007130 5.6e-77 292.4 216 64.4
Gorai.010G081300 Gossypium raimondii HOM05D005623 ORTHO05D007130 5.6e-77 292.4 216 64.4
Manes.16G104200 Manihot esculenta HOM05D005623 ORTHO05D007130 7.4e-77 292.0 216 64.8
Carub.0007s1105 Capsella rubella HOM05D005623 ORTHO05D007130 2.8e-76 290.0 205 67.3
EL10Ac8g19268 Beta vulgaris HOM05D005623 ORTHO05D007130 3.7e-76 289.7 223 62.3
Aa31LG2G20980 Aethionema arabicum HOM05D005623 ORTHO05D007130 4.8e-76 289.3 205 66.8
A01p08540 Brassica napus HOM05D005623 ORTHO05D007130 4.8e-76 289.3 204 66.7
BraA01t00803Z Brassica rapa HOM05D005623 ORTHO05D007130 4.8e-76 289.3 204 66.7
Prupe.7G213700 Prunus persica HOM05D005623 ORTHO05D007130 6.2e-76 288.9 216 63.9
BcaC09g51737 Brassica carinata HOM05D005623 ORTHO05D007130 8.1e-76 288.5 204 66.7
C01p09970 Brassica napus HOM05D005623 ORTHO05D007130 8.1e-76 288.5 204 66.7
BolC1t00959H Brassica oleracea HOM05D005623 ORTHO05D007130 8.1e-76 288.5 204 66.7
COL.COLO4_18232 Corchorus olitorius HOM05D005623 ORTHO05D007130 8.1e-76 288.5 215 63.7
AL7G22900 Arabidopsis lyrata HOM05D005623 ORTHO05D007130 1.1e-75 288.1 204 66.7
Duzib187G0326 Durio zibethinus HOM05D005623 ORTHO05D007130 1.1e-75 288.1 214 64.0
Thhalv10025013m.g Eutrema salsugineum HOM05D005623 ORTHO05D007130 1.1e-75 288.1 205 66.3
CARHR237320 Cardamine hirsuta HOM05D005623 ORTHO05D007130 1.8e-75 287.3 204 66.7
Gohir.A06G071000 Gossypium hirsutum HOM05D005623 ORTHO05D007130 1.8e-75 287.3 216 63.4
TWI34G0204 Tripterygium wilfordii HOM05D005623 ORTHO05D007130 3.1e-75 286.6 207 67.6
Atru.chr7.1542 Acer truncatum HOM05D005623 ORTHO05D007130 4.0e-75 286.2 218 63.3
Sp7g27360 Schrenkiella parvula HOM05D005623 ORTHO05D007130 4.0e-75 286.2 204 65.2
AT4G29490 Arabidopsis thaliana HOM05D005623 ORTHO05D007130 5.3e-75 285.8 204 66.2
Cpa.g.sc78.66 Carica papaya HOM05D005623 ORTHO05D007130 5.3e-75 285.8 205 66.8
MELO3C015446.2 Cucumis melo HOM05D005623 ORTHO05D007130 9.0e-75 285.0 220 61.8
Sc14g0000790 Simmondsia chinensis HOM05D005623 ORTHO05D007130 1.5e-74 284.3 206 66.5
AUR62031248 Chenopodium quinoa HOM05D005623 ORTHO05D007130 2.0e-74 283.9 223 61.4
THA.LOC104814603 Tarenaya hassleriana HOM05D005623 ORTHO05D007130 2.0e-74 283.9 209 65.6
CANSAT56G1243 Cannabis sativa HOM05D005623 ORTHO05D007130 2.6e-74 283.5 204 63.2
Sed0005617 Sechium edule HOM05D005623 ORTHO05D007130 2.6e-74 283.5 215 63.3
vmacro10811 Vaccinium macrocarpon HOM05D005623 ORTHO05D007130 4.5e-74 282.7 227 62.1
Ah.14g086080 Amaranthus hybridus HOM05D005623 ORTHO05D007130 5.8e-74 282.3 206 66.0
QL02p063259 Quercus lobata HOM05D005623 ORTHO05D007130 7.6e-74 282.0 205 64.4
BcaC09g51738 Brassica carinata HOM05D000639 ORTHO05D003485 1.0e-73 281.6 192 66.1
CSS0001651 Camellia sinensis var. sinensis HOM05D005623 ORTHO05D007130 1.0e-73 281.6 205 65.4
Haze_25882 Corylus avellana HOM05D005623 ORTHO05D007130 1.3e-73 281.2 210 62.9
AUR62027454 Chenopodium quinoa HOM05D005623 ORTHO05D007130 1.7e-73 280.8 206 63.1
Eucgr.C03666 Eucalyptus grandis HOM05D005623 ORTHO05D007130 2.2e-73 280.4 204 66.2
Ca_17399_v3 Cicer arietinum L. HOM05D005623 ORTHO05D007130 3.8e-73 279.6 205 65.4
Ciclev10007793m.g Citrus clementina HOM05D005623 ORTHO05D007130 6.5e-73 278.9 214 61.7
CsaV3_1G040190 Cucumis sativus L. HOM05D005623 ORTHO05D007130 1.4e-72 277.7 220 60.0
CsaV3_UNG058470 Cucumis sativus L. HOM05D005623 ORTHO05D007130 1.4e-72 277.7 220 60.0
CiPaw.04G152100 Carya illinoinensis HOM05D005623 ORTHO05D007130 1.9e-72 277.3 206 64.1
MD15G1203700 Malus domestica HOM05D005623 ORTHO05D007130 1.9e-72 277.3 216 62.0
Potri.006G149500 Populus trichocarpa HOM05D005623 ORTHO05D007130 2.5e-72 276.9 216 62.0
Rhsim05G0035400 Rhododendron simsii HOM05D005623 ORTHO05D007130 4.2e-72 276.2 231 60.6
FvH4_1g06970 Fragaria vesca HOM05D005623 ORTHO05D007130 5.5e-72 275.8 216 62.0
FAN19G1723 Fragaria x ananassa HOM05D005623 ORTHO05D007130 5.5e-72 275.8 216 62.0
Oeu000326.2 Olea europaea HOM05D005623 ORTHO05D007130 5.5e-72 275.8 210 64.3
Os02g0224400 Oryza sativa ssp. japonica HOM05D005623 ORTHO05D007130 7.1e-72 275.4 205 63.4
FAN23G2436 Fragaria x ananassa HOM05D005623 ORTHO05D007130 9.3e-72 275.0 216 62.0
FAN26G2999 Fragaria x ananassa HOM05D005623 ORTHO05D007130 9.3e-72 275.0 216 62.0
HPP92_000613 Vanilla planifolia HOM05D005623 ORTHO05D007130 1.2e-71 274.6 216 61.6
PGR102G2538 Punica granatum HOM05D005623 ORTHO05D007130 2.7e-71 273.5 215 61.4
FAN28G0299 Fragaria x ananassa HOM05D005623 ORTHO05D007130 3.5e-71 273.1 216 61.6
FAN26G0941 Fragaria x ananassa HOM05D005623 ORTHO05D007130 4.6e-71 272.7 216 61.1
MSTRG.6040 Avicennia marina HOM05D005623 ORTHO05D007130 1.8e-70 270.8 210 62.9
RcHm_v2.0_Chr2g0092921 Rosa chinensis HOM05D005623 ORTHO05D007130 2.3e-70 270.4 216 60.6
SalBow6G5356 Salvia bowleyana HOM05D005623 ORTHO05D007130 3.0e-70 270.0 205 63.4
Cc06_g11060 Coffea canephora HOM05D005623 ORTHO05D007130 3.9e-70 269.6 215 60.5
VMungo0251G2698 Vigna mungo HOM05D005623 ORTHO05D007130 3.9e-70 269.6 217 60.8
DCAR_024065 Daucus carota HOM05D005623 ORTHO05D007130 6.7e-70 268.9 215 62.3
Zm00001eb239790 Zea mays HOM05D005623 ORTHO05D007130 8.7e-70 268.5 205 62.9
Lj4A313G20 Lonicera japonica HOM05D005623 ORTHO05D007130 1.1e-69 268.1 198 61.6
Glyma.05G222900 Glycine max HOM05D005623 ORTHO05D007130 1.9e-69 267.3 204 63.2
AagrBONN_evm.TU.Sc2ySwM_117.2163 Anthoceros agrestis HOM05D005623 ORTHO05D007130 3.3e-69 266.5 209 58.9
Medtr8g101730 Medicago truncatula HOM05D005623 ORTHO05D007130 5.7e-69 265.8 215 60.5
ECA234G3237 Erigeron canadensis HOM05D005623 ORTHO05D007130 7.4e-69 265.4 215 58.6
Migut.J00444 Erythranthe guttata HOM05D005623 ORTHO05D007130 7.4e-69 265.4 211 62.6
Peaxi162Scf00264g00083 Petunia axillaris HOM05D005623 ORTHO05D007130 7.4e-69 265.4 205 63.4
unitig_26.g9166 Utricularia gibba HOM05D005623 ORTHO05D007130 7.4e-69 265.4 205 63.9
Lj4g0010059 Lotus japonicus HOM05D005623 ORTHO05D007130 9.6e-69 265.0 204 62.3
HanXRQChr10g0319101 Helianthus annuus HOM05D005623 ORTHO05D007130 3.7e-68 263.1 217 57.1
Dinv42293 Davidia involucrata HOM05D005623 ORTHO05D007130 4.8e-68 262.7 193 65.8
Lsat_1_v5_gn_5_145881 Lactuca sativa HOM05D005623 ORTHO05D007130 4.8e-68 262.7 193 61.1
Phvul.002G304900 Phaseolus vulgaris HOM05D005623 ORTHO05D007130 4.8e-68 262.7 214 60.3
Solyc07g026960.3 Solanum lycopersicum HOM05D005623 ORTHO05D007130 4.8e-68 262.7 211 62.1
Psat7g019640 Pisum sativum HOM05D005623 ORTHO05D007130 6.3e-68 262.3 205 61.5
arahy.Tifrunner.gnm1.ann1.G7AZGE Arachis hypogaea HOM05D005623 ORTHO05D007130 8.2e-68 261.9 223 58.3
Lalb_Chr05g0223571 Lupinus albus HOM05D005623 ORTHO05D007130 3.1e-67 260.0 203 62.1
TPR.G25466 Trifolium pratense HOM05D005623 ORTHO05D007130 1.2e-66 258.1 220 58.6
Lalb_Chr16g0390941 Lupinus albus HOM05D005623 ORTHO05D007130 1.5e-66 257.7 204 61.3
Sopen07g014810 Solanum pennellii HOM05D005623 ORTHO05D007130 1.5e-66 257.7 211 61.1
Nitab4.5_0007297g0030 Nicotiana tabacum HOM05D005623 ORTHO05D007130 5.9e-66 255.8 224 58.5
PSO210G4788 Papaver somniferum HOM05D005623 ORTHO05D007130 5.5e-64 249.2 212 58.0
Actinidia25269 Actinidia chinensis HOM05D005623 ORTHO05D007130 1.2e-63 248.1 190 63.2
Mapoly0025s0122 Marchantia polymorpha HOM05D005623 ORTHO05D007130 1.2e-63 248.1 204 58.8
SMO358G0241 Selaginella moellendorffii HOM05D005623 ORTHO05D007130 1.2e-63 248.1 204 57.8
Cfa003118 Carpinus fangiana HOM05D005623 ORTHO05D007130 8.7e-62 241.9 213 56.8
Pp3c22_16460 Physcomitrium patens HOM05D005623 ORTHO05D007130 2.2e-60 237.3 205 58.0
SGA_v2.0_scaffold10G05202 Striga asiatica HOM05D005623 ORTHO05D007130 1.4e-59 234.6 207 58.5
CBR_g19775 Chara braunii HOM05D000019 ORTHO05D000002 6.1e-55 219.2 180 56.7
Cre07.g342920 Chlamydomonas reinhardtii HOM05D005623 ORTHO05D007130 4.4e-53 213.0 194 53.1
PRCOL_00000211 Prasinoderma coloniale HOM05D005623 ORTHO05D007130 2.5e-48 197.2 194 50.5
Nitab4.5_0000713g0180 Nicotiana tabacum HOM05D005623 ORTHO05D007130 8.8e-46 188.7 140 62.9
PSO210G1449 Papaver somniferum HOM05D005623 ORTHO05D007130 1.8e-43 181.0 136 64.7
ATR0789G174 Amborella trichopoda HOM05D005623 ORTHO05D007130 5.3e-43 179.5 137 65.0
Hund25842 Selenicereus undatus HOM05D005623 ORTHO05D007130 9.4e-40 168.7 239 38.1
Glyma.08G029900 Glycine max HOM05D005623 ORTHO05D007130 1.0e-33 148.7 122 59.0
Cfa024881 Carpinus fangiana HOM05D005623 ORTHO05D007130 4.0e-30 136.7 208 34.1
CDE06G1237 Ceratophyllum demersum HOM05D005623 ORTHO05D007130 3.4e-29 133.7 87 66.7
MCO08G350 Micromonas commoda HOM05D005623 ORTHO05D007130 1.3e-25 121.7 210 35.2
CDE06G0203 Ceratophyllum demersum HOM05D005623 ORTHO05D007130 4.2e-24 116.7 80 67.5
PSO782G3778 Papaver somniferum HOM05D005623 ORTHO05D007130 8.3e-20 102.4 67 65.7
PSO210G0842 Papaver somniferum HOM05D005623 ORTHO05D007130 6.6e-17 92.8 54 72.2
Cre02.g083065 Chlamydomonas reinhardtii HOM05D005623 ORTHO05D007130 4.0e-14 83.6 212 32.1
Ca_28747_v3 Cicer arietinum L. HOM05D002683 ORTHO05D007757 6.8e-14 82.8 172 32.0
Hma1.2p1_0663F.1_g198810 Hydrangea macrophylla HOM05D005623 ORTHO05D007130 8.3e-12 75.9 63 55.6
MD02G1074000 Malus domestica HOM05D005623 ORTHO05D007130 1.4e-11 75.1 69 56.5
Oeu053732.1 Olea europaea HOM05D002683 ORTHO05D007757 7.0e-11 72.8 202 28.2
SMO119G0363 Selaginella moellendorffii HOM05D002683 ORTHO05D007757 1.5e-08 65.1 168 28.6
CBR_g23088 Chara braunii HOM05D002683 ORTHO05D007757 2.5e-08 64.3 122 29.5
MD02G1074100 Malus domestica HOM05D005623 ORTHO05D007130 9.5e-08 62.4 46 60.9


User provided reference genes

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