Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g05444 Nelumbo nucifera HOM05D000191 ORTHO05D280322 1.9e-68 262.3 127 100.0
Nn1g06453 Nelumbo nucifera HOM05D000191 ORTHO05D009688 5.1e-21 104.8 81 71.6
Nn3g16381 Nelumbo nucifera HOM05D000191 ORTHO05D009688 4.3e-20 101.7 86 67.4
Nn3g16796 Nelumbo nucifera HOM05D000191 ORTHO05D009688 1.0e-13 80.5 77 59.7
Sabra10G0152500 Salix brachista HOM05D000191 ORTHO05D009688 6.9e-10 67.8 90 45.6
Manes.10G023600 Manihot esculenta HOM05D000191 ORTHO05D009688 2.0e-09 66.2 80 50.0
CANSAT25G0309 Cannabis sativa HOM05D000191 ORTHO05D009688 3.4e-09 65.5 130 36.2
Potri.010G197900 Populus trichocarpa HOM05D000191 ORTHO05D009688 5.9e-09 64.7 66 51.5
Prupe.2G241000 Prunus persica HOM05D000191 ORTHO05D009688 5.9e-09 64.7 79 49.4
Haze_17130 Corylus avellana HOM05D000191 ORTHO05D009688 2.9e-08 62.4 79 46.8
Oeu031369.1 Olea europaea HOM05D000191 ORTHO05D009688 2.9e-08 62.4 83 42.2
RcHm_v2.0_Chr1g0368611 Rosa chinensis HOM05D000191 ORTHO05D009688 3.8e-08 62.0 90 46.7
Potri.008G060500 Populus trichocarpa HOM05D000191 ORTHO05D009688 5.0e-08 61.6 76 44.7
Dinv34467 Davidia involucrata HOM05D001260 ORTHO05D002424 6.5e-08 61.2 78 44.9
Oeu001520.1 Olea europaea HOM05D000191 ORTHO05D009688 6.5e-08 61.2 83 43.4
QL08p061693 Quercus lobata HOM05D000191 ORTHO05D009688 1.1e-07 60.5 79 46.8
DCAR_024871 Daucus carota HOM05D000191 ORTHO05D009688 1.9e-07 59.7 66 48.5
Migut.N01340 Erythranthe guttata HOM05D000191 ORTHO05D009688 1.9e-07 59.7 86 44.2
TAR369G0761 Trochodendron aralioides HOM05D000191 ORTHO05D009688 1.9e-07 59.7 78 44.9
MD01G1140500 Malus domestica HOM05D000191 ORTHO05D009688 2.5e-07 59.3 79 48.1
MD07G1204800 Malus domestica HOM05D000191 ORTHO05D009688 3.2e-07 58.9 79 48.1
FAN10G2871 Fragaria x ananassa HOM05D000191 ORTHO05D009688 4.2e-07 58.5 90 44.4
Lsat_1_v5_gn_2_117441 Lactuca sativa HOM05D000191 ORTHO05D009688 5.5e-07 58.2 62 50.0
Nn3g21406 Nelumbo nucifera HOM05D000191 ORTHO05D009688 7.2e-07 57.8 31 83.9
Gohir.D10G236100 Gossypium hirsutum HOM05D000191 ORTHO05D009688 9.4e-07 57.4 71 45.1
Gorai.011G269900 Gossypium raimondii HOM05D000191 ORTHO05D009688 9.4e-07 57.4 71 45.1
COL.COLO4_25527 Corchorus olitorius HOM05D000191 ORTHO05D009688 1.6e-06 56.6 60 48.3
Gohir.A10G223600 Gossypium hirsutum HOM05D000191 ORTHO05D009688 1.6e-06 56.6 69 44.9
SGA_v2.0_scaffold207G41940 Striga asiatica HOM05D000191 ORTHO05D009688 1.6e-06 56.6 68 45.6
FvH4_7g23460 Fragaria vesca HOM05D000191 ORTHO05D009688 2.1e-06 56.2 64 48.4
FAN01G0012 Fragaria x ananassa HOM05D000191 ORTHO05D009688 2.1e-06 56.2 64 48.4
FAN06G2150 Fragaria x ananassa HOM05D000191 ORTHO05D009688 2.1e-06 56.2 64 48.4
HanXRQChr14g0458371 Helianthus annuus HOM05D000191 ORTHO05D009688 2.7e-06 55.8 77 41.6
PGSC0003DMG400015688 Solanum tuberosum HOM05D000191 ORTHO05D009688 2.7e-06 55.8 66 50.0
Sabra08G0044700 Salix brachista HOM05D001260 ORTHO05D002424 3.6e-06 55.5 29 79.3
Atru.chr12.298 Acer truncatum HOM05D000191 ORTHO05D009688 4.7e-06 55.1 91 39.6
CAN.G222.12 Capsicum annuum HOM05D000191 ORTHO05D009688 4.7e-06 55.1 83 44.6
ClCG07G003640 Citrullus lanatus HOM05D000191 ORTHO05D009688 4.7e-06 55.1 63 44.4
FAN03G1540 Fragaria x ananassa HOM05D000191 ORTHO05D009688 4.7e-06 55.1 60 48.3
SalBow5G4477 Salvia bowleyana HOM05D000191 ORTHO05D009688 4.7e-06 55.1 72 44.4
SalBow5G5120 Salvia bowleyana HOM05D000191 ORTHO05D009688 4.7e-06 55.1 72 44.4
Ciclev10033889m.g Citrus clementina HOM05D000191 ORTHO05D009688 6.1e-06 54.7 60 46.7
CsaV3_5G008420 Cucumis sativus L. HOM05D000191 ORTHO05D009688 6.1e-06 54.7 62 45.2
Nitab4.5_0000987g0030 Nicotiana tabacum HOM05D000191 ORTHO05D009688 6.1e-06 54.7 79 43.0
CiPaw.01G292300 Carya illinoinensis HOM05D000191 ORTHO05D009688 7.9e-06 54.3 29 79.3


User provided reference genes

Program Settings