Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g05440 Nelumbo nucifera HOM05D000771 ORTHO05D001350 1.6e-28 128.6 62 100.0
Nn1g05441 Nelumbo nucifera HOM05D000771 ORTHO05D001350 1.6e-28 128.6 62 100.0
Nn8g39936 Nelumbo nucifera HOM05D000771 ORTHO05D001350 1.2e-20 102.4 54 92.6
Nn6g34620 Nelumbo nucifera HOM05D000771 ORTHO05D001350 5.8e-18 93.6 52 86.5
MBI11_g41924_MAGBIO Magnolia biondii HOM05D000771 ORTHO05D001350 7.3e-13 76.6 52 73.1
Nn6g33466 Nelumbo nucifera HOM05D000771 ORTHO05D001350 9.5e-13 76.3 60 65.0
Cc06_g06790 Coffea canephora HOM05D000771 ORTHO05D001350 2.1e-12 75.1 52 69.2
TAR636G3305 Trochodendron aralioides HOM05D000771 ORTHO05D001350 2.8e-12 74.7 52 71.2
Aqoxy1G00615 Aquilegia oxysepala HOM05D000771 ORTHO05D001350 4.7e-12 73.9 52 67.3
Nn2g14369 Nelumbo nucifera HOM05D000771 ORTHO05D001350 4.7e-12 73.9 52 71.2
ATR0697G182 Amborella trichopoda HOM05D000771 ORTHO05D001350 6.2e-12 73.6 52 67.3
CiPaw.09G022400 Carya illinoinensis HOM05D000771 ORTHO05D001350 1.1e-11 72.8 52 63.5
TAR623G1408 Trochodendron aralioides HOM05D000771 ORTHO05D001350 1.1e-11 72.8 52 75.0
GSVIVG01022569001 Vitis vinifera HOM05D000771 ORTHO05D001350 1.1e-11 72.8 51 70.6
Atru.chr8.1314 Acer truncatum HOM05D000771 ORTHO05D001350 1.4e-11 72.4 52 67.3
TWI53G1316 Tripterygium wilfordii HOM05D000771 ORTHO05D001350 2.3e-11 71.6 51 68.6
ClCG10G018160 Citrullus lanatus HOM05D000771 ORTHO05D001350 4.0e-11 70.9 52 59.6
COL.COLO4_29524 Corchorus olitorius HOM05D000771 ORTHO05D001350 4.0e-11 70.9 52 65.4
MELO3C009557.2 Cucumis melo HOM05D000771 ORTHO05D001350 4.0e-11 70.9 52 59.6
CsaV3_3G038150 Cucumis sativus L. HOM05D000771 ORTHO05D001350 4.0e-11 70.9 52 59.6
Dinv12357 Davidia involucrata HOM05D000771 ORTHO05D001350 4.0e-11 70.9 52 67.3
Prupe.7G091900 Prunus persica HOM05D000771 ORTHO05D001350 5.2e-11 70.5 52 67.3
Hma1.2p1_2082F.1_g313540 Hydrangea macrophylla HOM05D000771 ORTHO05D001350 6.8e-11 70.1 52 63.5
Manes.08G035600 Manihot esculenta HOM05D000771 ORTHO05D001350 1.2e-10 69.3 52 65.4
Cfa020061 Carpinus fangiana HOM05D000771 ORTHO05D001350 1.5e-10 68.9 52 65.4
Potri.016G067600 Populus trichocarpa HOM05D000771 ORTHO05D001350 1.5e-10 68.9 51 66.7
Thecc.05G107900 Theobroma cacao HOM05D000771 ORTHO05D001350 2.0e-10 68.6 52 67.3
Actinidia06187 Actinidia chinensis HOM05D000771 ORTHO05D001350 3.4e-10 67.8 52 59.6
MD14G1041900 Malus domestica HOM05D000771 ORTHO05D001350 3.4e-10 67.8 52 65.4
PGR004G0178 Punica granatum HOM05D000771 ORTHO05D001350 3.4e-10 67.8 52 65.4
Ah.12g059380 Amaranthus hybridus HOM05D000771 ORTHO05D001350 4.4e-10 67.4 52 59.6
CSS0026891 Camellia sinensis var. sinensis HOM05D000771 ORTHO05D001350 4.4e-10 67.4 56 58.9
CSS0047338 Camellia sinensis var. sinensis HOM05D000771 ORTHO05D001350 4.4e-10 67.4 56 58.9
Haze_20137 Corylus avellana HOM05D000771 ORTHO05D001350 4.4e-10 67.4 52 63.5
Sed0012297 Sechium edule HOM05D000771 ORTHO05D001350 4.4e-10 67.4 52 57.7
Ciclev10011109m.g Citrus clementina HOM05D000771 ORTHO05D001350 5.8e-10 67.0 52 65.4
Dinv31780 Davidia involucrata HOM05D000771 ORTHO05D001350 5.8e-10 67.0 52 63.5
Duzib106G0046 Durio zibethinus HOM05D000771 ORTHO05D001350 5.8e-10 67.0 52 61.5
Gohir.A11G315400 Gossypium hirsutum HOM05D000771 ORTHO05D001350 5.8e-10 67.0 46 69.6
Gohir.D11G332400 Gossypium hirsutum HOM05D000771 ORTHO05D001350 5.8e-10 67.0 46 69.6
Gorai.007G363300 Gossypium raimondii HOM05D000771 ORTHO05D001350 5.8e-10 67.0 46 69.6
FAN05G5476 Fragaria x ananassa HOM05D000771 ORTHO05D001350 7.5e-10 66.6 52 63.5
TWI74G1462 Tripterygium wilfordii HOM05D000771 ORTHO05D001350 7.5e-10 66.6 51 66.7
MD12G1043000 Malus domestica HOM05D000771 ORTHO05D001350 1.3e-09 65.9 52 63.5
Eucgr.A02562 Eucalyptus grandis HOM05D000771 ORTHO05D001350 1.7e-09 65.5 52 61.5
Sabra16G0068600 Salix brachista HOM05D000771 ORTHO05D001350 1.7e-09 65.5 52 61.5
CANSAT64G2153 Cannabis sativa HOM05D000771 ORTHO05D001350 2.2e-09 65.1 52 61.5
CiPaw.10G019500 Carya illinoinensis HOM05D000771 ORTHO05D001350 2.2e-09 65.1 52 59.6
FvH4_6g20670 Fragaria vesca HOM05D000771 ORTHO05D001350 2.2e-09 65.1 52 63.5
FAN02G3385 Fragaria x ananassa HOM05D000771 ORTHO05D001350 2.2e-09 65.1 52 63.5
FAN05G4027 Fragaria x ananassa HOM05D000771 ORTHO05D001350 2.2e-09 65.1 52 63.5
FAN14G3861 Fragaria x ananassa HOM05D000771 ORTHO05D001350 2.2e-09 65.1 52 63.5
Sc01g0005410 Simmondsia chinensis HOM05D000771 ORTHO05D001350 2.9e-09 64.7 52 59.6
Phvul.007G266600 Phaseolus vulgaris HOM05D000771 ORTHO05D001350 3.7e-09 64.3 52 63.5
VMungo0720G1766 Vigna mungo HOM05D000771 ORTHO05D001350 3.7e-09 64.3 52 63.5
Dinv04429 Davidia involucrata HOM05D000771 ORTHO05D001350 6.4e-09 63.5 52 63.5
Dinv06043 Davidia involucrata HOM05D000771 ORTHO05D001350 6.4e-09 63.5 52 63.5
FAN09G2507 Fragaria x ananassa HOM05D000771 ORTHO05D001350 6.4e-09 63.5 52 61.5
Nn1g00517 Nelumbo nucifera HOM05D000771 ORTHO05D001350 6.4e-09 63.5 60 60.0
Os12g0620600 Oryza sativa ssp. japonica HOM05D000771 ORTHO05D001350 6.4e-09 63.5 53 60.4
QL07p027259 Quercus lobata HOM05D000771 ORTHO05D001350 6.4e-09 63.5 52 61.5
RcHm_v2.0_Chr3g0476551 Rosa chinensis HOM05D000771 ORTHO05D001350 6.4e-09 63.5 52 61.5
Actinidia07946 Actinidia chinensis HOM05D000771 ORTHO05D001350 8.3e-09 63.2 52 57.7
Glyma.10G083500 Glycine max HOM05D000771 ORTHO05D001350 8.3e-09 63.2 52 61.5
Gorai.002G234100 Gossypium raimondii HOM05D000771 ORTHO05D001350 1.4e-08 62.4 50 60.0
Manes.09G043400 Manihot esculenta HOM05D000771 ORTHO05D001350 1.4e-08 62.4 52 61.5
Gohir.D01G190400 Gossypium hirsutum HOM05D000771 ORTHO05D001350 1.9e-08 62.0 50 60.0
SalBow5G0861 Salvia bowleyana HOM05D000771 ORTHO05D001350 1.9e-08 62.0 52 59.6
Oeu045016.1 Olea europaea HOM05D000771 ORTHO05D001350 2.4e-08 61.6 51 56.9
Lj2C36G17 Lonicera japonica HOM05D000771 ORTHO05D001350 3.2e-08 61.2 41 75.6
Sed0016420 Sechium edule HOM05D000771 ORTHO05D001350 3.2e-08 61.2 52 55.8
Duzib093G0059 Durio zibethinus HOM05D000771 ORTHO05D001350 4.1e-08 60.8 52 55.8
Gohir.A01G200300 Gossypium hirsutum HOM05D000771 ORTHO05D001350 4.1e-08 60.8 50 58.0
Medtr1g056180 Medicago truncatula HOM05D000771 ORTHO05D001350 4.1e-08 60.8 54 64.8
CDE07G0850 Ceratophyllum demersum HOM05D000771 ORTHO05D001350 9.2e-08 59.7 52 53.8
Psat6g126320 Pisum sativum HOM05D000771 ORTHO05D001350 9.2e-08 59.7 54 63.0
EL10Ac5g11839 Beta vulgaris HOM05D000771 ORTHO05D001350 1.6e-07 58.9 53 52.8
AUR62030705 Chenopodium quinoa HOM05D000771 ORTHO05D001350 1.6e-07 58.9 52 53.8
Oeu020190.1 Olea europaea HOM05D000771 ORTHO05D001350 1.6e-07 58.9 51 52.9
Ca_11673_v3 Cicer arietinum L. HOM05D000771 ORTHO05D001350 2.1e-07 58.5 54 63.0
Lalb_Chr01g0017801 Lupinus albus HOM05D000771 ORTHO05D001350 2.1e-07 58.5 52 57.7
Peaxi162Scf03057g00005 Petunia axillaris HOM05D000771 ORTHO05D001350 2.1e-07 58.5 52 53.8
HPP92_018629 Vanilla planifolia HOM05D000771 ORTHO05D001350 2.7e-07 58.2 52 53.8
CSS0006627 Camellia sinensis var. sinensis HOM05D000771 ORTHO05D001350 3.5e-07 57.8 52 61.5
CAN.G911.32 Capsicum annuum HOM05D000771 ORTHO05D001350 3.5e-07 57.8 52 51.9
Gohir.D09G129300 Gossypium hirsutum HOM05D000771 ORTHO05D001350 3.5e-07 57.8 52 59.6
Gorai.006G148000 Gossypium raimondii HOM05D000771 ORTHO05D001350 3.5e-07 57.8 52 59.6
Potri.006G201200 Populus trichocarpa HOM05D000771 ORTHO05D001350 3.5e-07 57.8 52 55.8
HPP92_019543 Vanilla planifolia HOM05D000771 ORTHO05D001350 3.5e-07 57.8 54 44.4
CDE06G2460 Ceratophyllum demersum HOM05D000771 ORTHO05D001350 4.6e-07 57.4 52 51.9
Gohir.A09G133000 Gossypium hirsutum HOM05D000771 ORTHO05D001350 4.6e-07 57.4 52 57.7
vmacro22390 Vaccinium macrocarpon HOM05D000771 ORTHO05D001350 6.0e-07 57.0 53 56.6
Glyma.03G203600 Glycine max HOM05D000771 ORTHO05D001350 1.0e-06 56.2 52 55.8
Glyma.19G201000 Glycine max HOM05D000771 ORTHO05D001350 1.0e-06 56.2 52 59.6
PSO339G0665 Papaver somniferum HOM05D000771 ORTHO05D001350 1.0e-06 56.2 52 57.7
PSO384G5060 Papaver somniferum HOM05D000771 ORTHO05D001350 1.0e-06 56.2 52 57.7
arahy.Tifrunner.gnm1.ann1.IKB72F Arachis hypogaea HOM05D000771 ORTHO05D001350 1.3e-06 55.8 52 61.5
Nitab4.5_0000691g0010 Nicotiana tabacum HOM05D000771 ORTHO05D001350 1.3e-06 55.8 41 68.3
Actinidia03868 Actinidia chinensis HOM05D000771 ORTHO05D001350 2.3e-06 55.1 52 57.7
Actinidia03976 Actinidia chinensis HOM05D000771 ORTHO05D001350 2.3e-06 55.1 52 57.7
Lalb_Chr25g0287911 Lupinus albus HOM05D000771 ORTHO05D001350 2.3e-06 55.1 56 51.8
Solyc01g006890.3 Solanum lycopersicum HOM05D000771 ORTHO05D001350 2.3e-06 55.1 52 50.0
Sopen01g002880 Solanum pennellii HOM05D000771 ORTHO05D001350 2.3e-06 55.1 52 50.0
PGSC0003DMG400021369 Solanum tuberosum HOM05D000771 ORTHO05D001350 2.3e-06 55.1 52 50.0
Actinidia34737 Actinidia chinensis HOM05D000771 ORTHO05D001350 3.0e-06 54.7 52 57.7
arahy.Tifrunner.gnm1.ann1.E0GHFU Arachis hypogaea HOM05D000771 ORTHO05D001350 3.0e-06 54.7 52 59.6
arahy.Tifrunner.gnm1.ann1.XRVF7Y Arachis hypogaea HOM05D000771 ORTHO05D001350 3.9e-06 54.3 51 56.9
AUR62036345 Chenopodium quinoa HOM05D000771 ORTHO05D001350 3.9e-06 54.3 52 50.0
Lj1g0027956 Lotus japonicus HOM05D000771 ORTHO05D001350 3.9e-06 54.3 51 56.9
Sabra06G0154900 Salix brachista HOM05D000771 ORTHO05D001350 3.9e-06 54.3 52 53.8
unitig_746.g26784 Utricularia gibba HOM05D000771 ORTHO05D001350 3.9e-06 54.3 48 54.2
MSTRG.19338 Avicennia marina HOM05D000771 ORTHO05D001350 5.1e-06 53.9 56 50.0
Eucgr.K01915 Eucalyptus grandis HOM05D000771 ORTHO05D001350 5.1e-06 53.9 56 51.8
Nitab4.5_0013105g0010 Nicotiana tabacum HOM05D000771 ORTHO05D001350 5.1e-06 53.9 41 65.9
Prupe.2G074400 Prunus persica HOM05D000771 ORTHO05D001350 5.1e-06 53.9 48 60.4
Hma1.2p1_0098F.1_g048210 Hydrangea macrophylla HOM05D000771 ORTHO05D001350 6.6e-06 53.5 37 64.9
SGA_v2.0_scaffold392G50673 Striga asiatica HOM05D000771 ORTHO05D001350 6.6e-06 53.5 54 53.7
Glyma.02G193700 Glycine max HOM05D000771 ORTHO05D001350 8.6e-06 53.1 52 53.8
TPR.G9675 Trifolium pratense HOM05D000771 ORTHO05D001350 8.6e-06 53.1 54 61.1


User provided reference genes

Program Settings