Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 4.6e-62 241.5 168 100.0
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 4.1e-42 175.3 170 77.6
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 1.3e-40 170.2 163 77.3
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 1.1e-39 167.2 168 75.0
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 2.3e-37 159.5 172 74.4
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 4.0e-37 158.7 172 74.4
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 1.5e-36 156.8 175 72.0
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 2.0e-36 156.4 164 75.6
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 4.4e-36 155.2 168 70.8
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 7.5e-36 154.5 168 70.8
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 9.7e-36 154.1 172 69.8
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 9.7e-36 154.1 168 75.0
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 1.3e-35 153.7 168 71.4
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 1.7e-35 153.3 172 73.3
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 1.7e-35 153.3 168 70.8
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 2.2e-35 152.9 170 74.1
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 2.8e-35 152.5 170 73.5
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 2.8e-35 152.5 170 71.2
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 4.8e-35 151.8 172 72.1
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 1.4e-34 150.2 168 72.6
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 1.8e-34 149.8 169 73.4
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 2.4e-34 149.4 166 72.9
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 2.4e-34 149.4 162 72.8
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 4.1e-34 148.7 167 73.1
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 5.3e-34 148.3 178 71.9
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 7.0e-34 147.9 163 72.4
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 1.2e-33 147.1 166 72.9
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 2.0e-33 146.4 163 71.8
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 3.5e-33 145.6 164 72.6
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 7.7e-33 144.4 164 73.2
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 7.7e-33 144.4 172 67.4
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 1.3e-32 143.7 163 69.9
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 2.2e-32 142.9 165 70.9
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 3.8e-32 142.1 164 71.3
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 8.5e-32 141.0 169 72.2
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 8.5e-32 141.0 164 72.0
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 1.1e-31 140.6 155 74.8
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 1.9e-31 139.8 164 73.8
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 2.5e-31 139.4 168 69.0
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 3.2e-31 139.0 164 71.3
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 3.2e-31 139.0 163 71.2
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 4.2e-31 138.7 178 64.6
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 9.4e-31 137.5 171 69.6
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 1.2e-30 137.1 163 70.6
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 1.2e-30 137.1 163 70.6
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 2.1e-30 136.3 164 72.0
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 2.1e-30 136.3 162 71.0
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 3.6e-30 135.6 164 71.3
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 3.6e-30 135.6 165 70.3
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 4.7e-30 135.2 168 69.0
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 1.4e-29 133.7 167 68.9
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 1.4e-29 133.7 142 74.6
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 2.3e-29 132.9 165 69.7
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 3.0e-29 132.5 174 66.1
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 3.0e-29 132.5 165 70.3
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 1.2e-28 130.6 164 70.7
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 1.2e-28 130.6 167 70.1
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.5e-28 130.2 133 80.5
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 1.5e-28 130.2 165 70.3
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 2.6e-28 129.4 166 69.3
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 3.4e-28 129.0 135 79.3
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 4.4e-28 128.6 104 64.4
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 5.7e-28 128.3 142 73.9
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 7.5e-28 127.9 166 66.9
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 7.5e-28 127.9 166 66.9
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 7.5e-28 127.9 166 68.7
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 7.5e-28 127.9 115 86.1
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 7.5e-28 127.9 115 86.1
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 9.8e-28 127.5 138 74.6
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 9.8e-28 127.5 164 67.1
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 9.8e-28 127.5 166 66.3
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 9.8e-28 127.5 127 82.7
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 1.3e-27 127.1 127 66.1
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 1.3e-27 127.1 129 79.8
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 8.3e-27 124.4 106 64.2
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 1.4e-26 123.6 166 66.9
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 2.4e-26 122.9 163 65.6
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 5.4e-26 121.7 139 75.5
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 2.2e-24 116.3 127 78.7
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 3.8e-24 115.5 138 68.1
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 5.0e-24 115.2 129 73.6
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 1.1e-23 114.0 121 81.8
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 4.2e-23 112.1 127 64.6
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 1.2e-22 110.5 181 42.0
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 1.6e-22 110.2 161 65.8
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 2.1e-22 109.8 117 78.6
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 2.1e-22 109.8 125 76.8
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 4.7e-22 108.6 142 45.1
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 1.8e-21 106.7 113 74.3
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 3.0e-21 105.9 146 65.8
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 6.8e-21 104.8 169 62.1
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 4.4e-20 102.1 100 59.0
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 1.3e-19 100.5 164 60.4
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 1.1e-15 87.4 129 46.5
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 1.5e-15 87.0 126 69.0
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 1.6e-14 83.6 147 59.2
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 2.0e-12 76.6 89 67.4
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 2.6e-12 76.3 143 55.9
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 5.7e-12 75.1 108 38.9
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 1.6e-09 67.0 71 52.1
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 1.7e-08 63.5 114 40.4
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 6.6e-08 61.6 136 55.1
Atru.chr4.788 Acer truncatum HOM05D007518 ORTHO05D008168 8.0e-06 54.7 33 78.8


User provided reference genes

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