Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g04968 Nelumbo nucifera HOM05D007812 ORTHO05D009912 1.1e-27 125.9 67 100.0
MBI01_g09945_MAGBIO Magnolia biondii HOM05D007812 ORTHO05D009912 6.9e-09 63.5 55 67.3
Hma1.2p1_0496F.1_g165840 Hydrangea macrophylla HOM05D007812 ORTHO05D009912 9.0e-09 63.2 53 60.4
BcaB06g25431 Brassica carinata HOM05D007812 ORTHO05D009912 1.2e-08 62.8 55 67.3
A05p35560 Brassica napus HOM05D007812 ORTHO05D009912 1.2e-08 62.8 55 67.3
C05p53950 Brassica napus HOM05D007812 ORTHO05D009912 1.2e-08 62.8 55 67.3
BolC5t34061H Brassica oleracea HOM05D007812 ORTHO05D009912 1.2e-08 62.8 55 67.3
BraA05t22365Z Brassica rapa HOM05D007812 ORTHO05D009912 1.2e-08 62.8 55 67.3
Manes.11G025800 Manihot esculenta HOM05D007812 ORTHO05D009912 2.0e-08 62.0 53 64.2
Cpa.g.sc25.43 Carica papaya HOM05D007812 ORTHO05D009912 2.6e-08 61.6 54 63.0
CDE06G1846 Ceratophyllum demersum HOM05D007812 ORTHO05D009912 4.5e-08 60.8 53 62.3
Thhalv10021887m.g Eutrema salsugineum HOM05D007812 ORTHO05D009912 2.2e-07 58.5 46 69.6
Sabra03G0024000 Salix brachista HOM05D007812 ORTHO05D009912 2.2e-07 58.5 53 62.3
Sp3g12050 Schrenkiella parvula HOM05D007812 ORTHO05D009912 2.9e-07 58.2 46 69.6
CiPaw.02G139600 Carya illinoinensis HOM05D007812 ORTHO05D009912 3.8e-07 57.8 54 63.0
Carub.0003s1338 Capsella rubella HOM05D007812 ORTHO05D009912 6.5e-07 57.0 56 66.1
TPR.G19291 Trifolium pratense HOM05D007812 ORTHO05D009912 6.5e-07 57.0 53 60.4
Cfa003579 Carpinus fangiana HOM05D007812 ORTHO05D009912 8.4e-07 56.6 55 60.0
DCAR_016154 Daucus carota HOM05D007812 ORTHO05D009912 1.1e-06 56.2 55 58.2
Nn8g38844 Nelumbo nucifera HOM05D007812 ORTHO05D009912 1.1e-06 56.2 54 64.8
Potri.001G196150 Populus trichocarpa HOM05D007812 ORTHO05D009912 1.1e-06 56.2 53 58.5
Aa31LG10G880 Aethionema arabicum HOM05D007812 ORTHO05D009912 1.4e-06 55.8 54 64.8
CARHR088620 Cardamine hirsuta HOM05D007812 ORTHO05D009912 2.5e-06 55.1 44 68.2
PGR102G2903 Punica granatum HOM05D007812 ORTHO05D009912 3.2e-06 54.7 46 63.0
Phvul.010G138300 Phaseolus vulgaris HOM05D007812 ORTHO05D009912 4.2e-06 54.3 54 59.3
COL.COLO4_30669 Corchorus olitorius HOM05D007812 ORTHO05D009912 5.5e-06 53.9 54 59.3
Lj3g0001021 Lotus japonicus HOM05D007812 ORTHO05D009912 5.5e-06 53.9 54 59.3
CSS0045617 Camellia sinensis var. sinensis HOM05D007812 ORTHO05D009912 7.1e-06 53.5 42 66.7


User provided reference genes

Program Settings