Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g04794 Nelumbo nucifera HOM05D015298 ORTHO05D018036 1.0e-117 426.8 217 100.0
Nn8g40378 Nelumbo nucifera HOM05D015298 ORTHO05D018036 3.9e-37 159.1 208 44.2
Nn7g37214 Nelumbo nucifera HOM05D015298 ORTHO05D018036 1.5e-25 120.6 127 42.5
Nn5g29081 Nelumbo nucifera HOM05D015298 ORTHO05D018036 3.9e-21 105.9 101 45.5
Nn8g40941 Nelumbo nucifera HOM05D015298 ORTHO05D018036 4.8e-19 99.0 117 40.2
PSO384G3979 Papaver somniferum HOM05D000003 ORTHO05D000126 6.7e-13 78.6 138 29.0
Nn5g27713 Nelumbo nucifera HOM05D037790 ORTHO05D279047 3.7e-11 72.8 64 53.1
Dinv24368 Davidia involucrata HOM05D000003 ORTHO05D000126 8.2e-11 71.6 189 27.5
Nn1g09294 Nelumbo nucifera HOM05D015298 ORTHO05D018036 1.1e-10 71.2 81 38.3
Nn1g01285 Nelumbo nucifera HOM05D015298 ORTHO05D018036 6.9e-10 68.6 110 31.8
TPR.G23677 Trifolium pratense HOM05D000003 ORTHO05D000126 2.6e-09 66.6 95 28.4
Dinv10075 Davidia involucrata HOM05D000003 ORTHO05D000126 3.4e-09 66.2 95 33.7
Dinv09809 Davidia involucrata HOM05D000003 ORTHO05D000126 4.5e-09 65.9 135 28.1
Rhsim06G0052000 Rhododendron simsii HOM05D000003 ORTHO05D000126 5.9e-09 65.5 92 34.8
Sed0009453 Sechium edule HOM05D000003 ORTHO05D000126 5.9e-09 65.5 154 26.0
Rhsim01G0112200 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.3e-08 64.3 95 33.7
Rhsim04G0089300 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.2e-08 63.5 126 28.6
RhsimUnG0029000 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.2e-08 63.5 126 28.6
Dinv11369 Davidia involucrata HOM05D000003 ORTHO05D000126 2.9e-08 63.2 126 27.0
vmacro02127 Vaccinium macrocarpon HOM05D000003 ORTHO05D000004 2.9e-08 63.2 95 32.6
Dinv03294 Davidia involucrata HOM05D000003 ORTHO05D000126 3.8e-08 62.8 126 25.4
Sed0000613 Sechium edule HOM05D000003 ORTHO05D000126 3.8e-08 62.8 120 28.3
Dinv08166 Davidia involucrata HOM05D000003 ORTHO05D000126 5.0e-08 62.4 90 33.3
Rhsim02G0038900 Rhododendron simsii HOM05D000003 ORTHO05D000126 5.0e-08 62.4 95 33.7
Rhsim05G0174100 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.0e-08 62.4 141 26.2
Dinv19479 Davidia involucrata HOM05D000077 ORTHO05D000339 8.5e-08 61.6 90 34.4
Dinv32967 Davidia involucrata HOM05D000280 ORTHO05D003998 8.5e-08 61.6 90 34.4
Dinv44808 Davidia involucrata HOM05D000003 ORTHO05D000126 8.5e-08 61.6 126 30.2
Nn7g36461 Nelumbo nucifera HOM05D029133 ORTHO05D000126 1.1e-07 61.2 127 27.6
Dinv26582 Davidia involucrata HOM05D055339 ORTHO05D000126 1.4e-07 60.8 125 33.6
QL03p012601 Quercus lobata HOM05D000003 ORTHO05D000126 1.4e-07 60.8 95 31.6
Dinv24168 Davidia involucrata HOM05D000723 ORTHO05D001760 1.9e-07 60.5 126 30.2
Dinv31372 Davidia involucrata HOM05D000003 ORTHO05D000126 1.9e-07 60.5 126 30.2
Lj5P270T37 Lonicera japonica HOM05D000003 ORTHO05D000126 1.9e-07 60.5 114 26.3
Dinv34280 Davidia involucrata HOM05D000003 ORTHO05D000126 3.2e-07 59.7 113 31.9
Lj1P1051T34 Lonicera japonica HOM05D000003 ORTHO05D000126 3.2e-07 59.7 90 31.1
Lju897C2T1 Lonicera japonica HOM05D000003 ORTHO05D000126 3.2e-07 59.7 89 29.2
CSS0044481 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 4.2e-07 59.3 103 27.2
FvH4_3g05891 Fragaria vesca HOM05D000003 ORTHO05D000126 4.2e-07 59.3 96 32.3
Sed0002049 Sechium edule HOM05D000003 ORTHO05D000126 4.2e-07 59.3 95 27.4
Atru.chr11.854 Acer truncatum HOM05D000003 ORTHO05D000126 5.5e-07 58.9 142 26.8
TPR.G37500 Trifolium pratense HOM05D000003 ORTHO05D000126 5.5e-07 58.9 104 28.8
Rhsim06G0055700 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.2e-07 58.5 141 26.2
Medtr2g061500 Medicago truncatula HOM05D000003 ORTHO05D000126 1.2e-06 57.8 89 30.3
Lj2C538T6 Lonicera japonica HOM05D000003 ORTHO05D000126 1.6e-06 57.4 114 26.3
Lj3g0020321 Lotus japonicus HOM05D000003 ORTHO05D000126 1.6e-06 57.4 163 26.4
Lj4g0019340 Lotus japonicus HOM05D000003 ORTHO05D000126 1.6e-06 57.4 163 26.4
QL04p011906 Quercus lobata HOM05D000003 ORTHO05D000126 1.6e-06 57.4 95 30.5
Dinv12691 Davidia involucrata HOM05D000003 ORTHO05D000126 2.1e-06 57.0 95 28.4
Lj3P316T7 Lonicera japonica HOM05D000003 ORTHO05D000126 2.1e-06 57.0 108 25.9
Lj9C38T11 Lonicera japonica HOM05D000003 ORTHO05D000126 2.1e-06 57.0 112 27.7
QL08p005062 Quercus lobata HOM05D000003 ORTHO05D000126 2.1e-06 57.0 126 27.8
TPR.G40617 Trifolium pratense HOM05D000003 ORTHO05D000126 2.1e-06 57.0 122 23.8
AUR62036218 Chenopodium quinoa HOM05D000003 ORTHO05D000126 2.7e-06 56.6 92 30.4
Dinv13290 Davidia involucrata HOM05D000003 ORTHO05D000126 2.7e-06 56.6 181 26.5
QL04p039774 Quercus lobata HOM05D000003 ORTHO05D000126 2.7e-06 56.6 157 22.3
Lj2C325T18 Lonicera japonica HOM05D000003 ORTHO05D000126 3.6e-06 56.2 105 23.8
Lj4C893T10 Lonicera japonica HOM05D000003 ORTHO05D000126 3.6e-06 56.2 143 25.2
Rhsim03G0079400 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.6e-06 56.2 95 30.5
Rhsim03G0080000 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.6e-06 56.2 95 30.5
Eucgr.I02046 Eucalyptus grandis HOM05D000003 ORTHO05D000126 4.7e-06 55.8 108 25.0
Lj3g0010137 Lotus japonicus HOM05D000003 ORTHO05D000126 4.7e-06 55.8 105 31.4
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 4.7e-06 55.8 118 26.3
QL04p092364 Quercus lobata HOM05D000003 ORTHO05D000126 4.7e-06 55.8 95 30.5
TPR.G21894 Trifolium pratense HOM05D000003 ORTHO05D000126 4.7e-06 55.8 91 27.5
TPR.G5809 Trifolium pratense HOM05D000003 ORTHO05D000126 4.7e-06 55.8 104 26.0
Atru.chr6.1097 Acer truncatum HOM05D000003 ORTHO05D000126 6.1e-06 55.5 110 26.4
Lj8P336T24 Lonicera japonica HOM05D000003 ORTHO05D000126 6.1e-06 55.5 90 26.7
Atru.chr1.3557 Acer truncatum HOM05D000003 ORTHO05D000126 7.9e-06 55.1 143 23.1
CSS0020689 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 7.9e-06 55.1 103 26.2
QL04p084391 Quercus lobata HOM05D000003 ORTHO05D000126 7.9e-06 55.1 81 37.0
QL12p040656 Quercus lobata HOM05D000003 ORTHO05D000126 7.9e-06 55.1 126 28.6
Rhsim07G0115800 Rhododendron simsii HOM05D000003 ORTHO05D000126 7.9e-06 55.1 100 26.0
TPR.G16107 Trifolium pratense HOM05D000003 ORTHO05D000126 7.9e-06 55.1 92 21.7


User provided reference genes

Program Settings