Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g04707 Nelumbo nucifera HOM05D001191 ORTHO05D000979 5.4e-77 290.8 137 100.0
Nn1g07155 Nelumbo nucifera HOM05D001191 ORTHO05D000979 1.6e-28 129.8 85 75.3
Gohir.D06G154400 Gossypium hirsutum HOM05D001191 ORTHO05D000979 2.6e-18 95.9 94 55.3
QL05p073028 Quercus lobata HOM05D001191 ORTHO05D000979 4.4e-18 95.1 88 58.0
Phvul.006G149620 Phaseolus vulgaris HOM05D001191 ORTHO05D000979 5.7e-18 94.7 97 52.6
Ca_00666_v3 Cicer arietinum L. HOM05D001191 ORTHO05D000979 7.5e-18 94.4 97 52.6
Gorai.010G180500 Gossypium raimondii HOM05D001191 ORTHO05D000979 9.7e-18 94.0 95 51.6
Gohir.A06G148500 Gossypium hirsutum HOM05D001191 ORTHO05D000979 1.3e-17 93.6 94 52.1
TAR627G0590 Trochodendron aralioides HOM05D001191 ORTHO05D000979 3.7e-17 92.0 89 60.7
CiPaw.09G092700 Carya illinoinensis HOM05D001191 ORTHO05D000979 8.3e-17 90.9 87 57.5
Glyma.07G261200 Glycine max HOM05D001191 ORTHO05D000979 8.3e-17 90.9 88 56.8
Ciclev10014683m.g Citrus clementina HOM05D001191 ORTHO05D000979 1.4e-16 90.1 90 54.4
Manes.16G006300 Manihot esculenta HOM05D001191 ORTHO05D000979 1.4e-16 90.1 93 53.8
Phvul.003G079500 Phaseolus vulgaris HOM05D001191 ORTHO05D000979 1.4e-16 90.1 88 55.7
CSS0042040 Camellia sinensis var. sinensis HOM05D001191 ORTHO05D000979 1.8e-16 89.7 93 50.5
CSS0049792 Camellia sinensis var. sinensis HOM05D001191 ORTHO05D000979 1.8e-16 89.7 93 50.5
Medtr2g023450 Medicago truncatula HOM05D001191 ORTHO05D000979 1.8e-16 89.7 99 52.5
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 2.4e-16 89.4 90 54.4
Glyma.17G012800 Glycine max HOM05D001191 ORTHO05D000979 4.1e-16 88.6 86 55.8
Haze_06808 Corylus avellana HOM05D001191 ORTHO05D000979 5.3e-16 88.2 85 51.8
arahy.Tifrunner.gnm1.ann1.A33MJY Arachis hypogaea HOM05D001191 ORTHO05D000979 1.2e-15 87.0 92 51.1
Sabra11G0003600 Salix brachista HOM05D001191 ORTHO05D000979 1.2e-15 87.0 92 53.3
TWI38G2238 Tripterygium wilfordii HOM05D001191 ORTHO05D000979 1.2e-15 87.0 89 56.2
arahy.Tifrunner.gnm1.ann1.52W6Q5 Arachis hypogaea HOM05D001191 ORTHO05D000979 2.0e-15 86.3 92 50.0
Psat1g180040 Pisum sativum HOM05D001191 ORTHO05D000979 2.0e-15 86.3 97 49.5
Potri.004G013500 Populus trichocarpa HOM05D001191 ORTHO05D000979 3.5e-15 85.5 92 52.2
TWI38G0086 Tripterygium wilfordii HOM05D001191 ORTHO05D000979 3.5e-15 85.5 89 57.3
Cfa000213 Carpinus fangiana HOM05D001191 ORTHO05D000979 4.5e-15 85.1 85 50.6
Hma1.2p1_0749F.1_g212640 Hydrangea macrophylla HOM05D001191 ORTHO05D000979 4.5e-15 85.1 93 55.9
Potri.011G004500 Populus trichocarpa HOM05D001191 ORTHO05D000979 4.5e-15 85.1 92 52.2
Cpa.g.sc152.21 Carica papaya HOM05D001191 ORTHO05D000979 5.9e-15 84.7 102 46.1
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 5.9e-15 84.7 89 55.1
FAN25G3711 Fragaria x ananassa HOM05D001191 ORTHO05D000979 5.9e-15 84.7 89 55.1
VMungo1215G1108 Vigna mungo HOM05D001191 ORTHO05D000979 5.9e-15 84.7 88 52.3
MELO3C007395.2 Cucumis melo HOM05D001191 ORTHO05D000979 7.7e-15 84.3 97 51.5
CsaV3_6G049000 Cucumis sativus L. HOM05D001191 ORTHO05D000979 7.7e-15 84.3 97 51.5
RcHm_v2.0_Chr5g0002861 Rosa chinensis HOM05D001191 ORTHO05D000979 7.7e-15 84.3 87 52.9
Eucgr.D01334 Eucalyptus grandis HOM05D001191 ORTHO05D000979 1.3e-14 83.6 98 50.0
FvH4_3g01950 Fragaria vesca HOM05D001191 ORTHO05D000979 1.7e-14 83.2 89 53.9
Lalb_Chr13g0304261 Lupinus albus HOM05D001191 ORTHO05D000979 1.7e-14 83.2 92 48.9
Glyma.09G004100 Glycine max HOM05D001191 ORTHO05D000979 2.2e-14 82.8 96 47.9
ClCG01G021930 Citrullus lanatus HOM05D001191 ORTHO05D000979 2.9e-14 82.4 97 48.5
VMungo0540G0337 Vigna mungo HOM05D001191 ORTHO05D000979 2.9e-14 82.4 106 43.4
THA.LOC104809503 Tarenaya hassleriana HOM05D001191 ORTHO05D000979 3.8e-14 82.0 106 42.5
Actinidia05510 Actinidia chinensis HOM05D001191 ORTHO05D000979 6.5e-14 81.3 90 54.4
MD05G1347900 Malus domestica HOM05D001191 ORTHO05D000979 6.5e-14 81.3 89 51.7
Nitab4.5_0002827g0040 Nicotiana tabacum HOM05D001191 ORTHO05D000979 6.5e-14 81.3 96 47.9
Nitab4.5_0005074g0020 Nicotiana tabacum HOM05D001191 ORTHO05D000979 6.5e-14 81.3 96 47.9
Duzib235G0698 Durio zibethinus HOM05D001191 ORTHO05D000979 8.5e-14 80.9 98 46.9
Thecc.06G221900 Theobroma cacao HOM05D001191 ORTHO05D000979 8.5e-14 80.9 98 46.9
Duzib160G0134 Durio zibethinus HOM05D001191 ORTHO05D000979 1.1e-13 80.5 95 47.4
TPR.G13447 Trifolium pratense HOM05D001382 ORTHO05D001266 1.9e-13 79.7 74 56.8
A03p67440 Brassica napus HOM05D001191 ORTHO05D000979 2.5e-13 79.3 104 49.0
BraA01t02731Z Brassica rapa HOM05D001191 ORTHO05D000979 2.5e-13 79.3 104 49.0
Glyma.15G108300 Glycine max HOM05D001191 ORTHO05D000979 4.2e-13 78.6 99 44.4
PSO063G1068 Papaver somniferum HOM05D001191 ORTHO05D000979 4.2e-13 78.6 99 47.5
vmacro22534 Vaccinium macrocarpon HOM05D001191 ORTHO05D000979 5.5e-13 78.2 92 46.7
vmacro23209 Vaccinium macrocarpon HOM05D001191 ORTHO05D000979 5.5e-13 78.2 92 46.7
HanXRQChr12g0367551 Helianthus annuus HOM05D001191 ORTHO05D000979 7.2e-13 77.8 93 46.2
Lj2C268T1 Lonicera japonica HOM05D001191 ORTHO05D000979 7.2e-13 77.8 92 51.1
Lj6g0000638 Lotus japonicus HOM05D001191 ORTHO05D000979 7.2e-13 77.8 96 47.9
GSVIVG01012718001 Vitis vinifera HOM05D001191 ORTHO05D000979 7.2e-13 77.8 59 66.1
Oeu014927.1 Olea europaea HOM05D001191 ORTHO05D000979 1.2e-12 77.0 91 48.4
PSO198G0035 Papaver somniferum HOM05D001191 ORTHO05D000979 1.2e-12 77.0 104 46.2
Solyc02g080610.4 Solanum lycopersicum HOM05D001191 ORTHO05D000979 1.6e-12 76.6 96 44.8
Sc24g0000180 Simmondsia chinensis HOM05D001191 ORTHO05D000979 2.1e-12 76.3 73 58.9
Sopen02g025310 Solanum pennellii HOM05D001191 ORTHO05D000979 2.1e-12 76.3 96 44.8
SHI02208 Sapria himalayana HOM05D001191 ORTHO05D000979 2.7e-12 75.9 85 48.2
SGA_v2.0_scaffold89G27465 Striga asiatica HOM05D001191 ORTHO05D000979 2.7e-12 75.9 94 46.8
MSTRG.15992 Avicennia marina HOM05D001191 ORTHO05D000979 6.1e-12 74.7 91 48.4
Cc09_g01600 Coffea canephora HOM05D001191 ORTHO05D000979 6.1e-12 74.7 97 48.5
COL.COLO4_31784 Corchorus olitorius HOM05D001191 ORTHO05D000979 8.0e-12 74.3 99 46.5
Aa31LG2G8880 Aethionema arabicum HOM05D001191 ORTHO05D000979 1.4e-11 73.6 109 43.1
Ah.09g234830 Amaranthus hybridus HOM05D001191 ORTHO05D000979 1.4e-11 73.6 104 47.1
SalBow8G0296 Salvia bowleyana HOM05D001191 ORTHO05D000979 1.8e-11 73.2 90 50.0
Lsat_1_v5_gn_4_60901 Lactuca sativa HOM05D001191 ORTHO05D000979 3.0e-11 72.4 95 47.4
MBI02_g21880_MAGBIO Magnolia biondii HOM05D001191 ORTHO05D000979 3.0e-11 72.4 112 45.5
Sp2g02510 Schrenkiella parvula HOM05D001191 ORTHO05D000979 3.0e-11 72.4 114 43.0
MSTRG.7204 Avicennia marina HOM05D001191 ORTHO05D000979 5.2e-11 71.6 92 46.7
SalBow1G2402 Salvia bowleyana HOM05D001191 ORTHO05D000979 6.8e-11 71.2 93 45.2
EL10Ac8g20068 Beta vulgaris HOM05D001191 ORTHO05D000979 1.2e-10 70.5 139 36.7
Peaxi162Scf01204g00126 Petunia axillaris HOM05D001191 ORTHO05D000979 1.2e-10 70.5 101 43.6
AL2G13850 Arabidopsis lyrata HOM05D001191 ORTHO05D000979 2.0e-10 69.7 125 38.4
Rhsim13G0153200 Rhododendron simsii HOM05D001191 ORTHO05D000979 2.0e-10 69.7 92 45.7
Migut.M01326 Erythranthe guttata HOM05D001191 ORTHO05D000979 2.6e-10 69.3 96 45.8
unitig_744.g24520 Utricularia gibba HOM05D001191 ORTHO05D000979 3.4e-10 68.9 91 46.2
MSTRG.13137 Avicennia marina HOM05D001191 ORTHO05D000979 7.5e-10 67.8 105 41.9
Thhalv10023357m.g Eutrema salsugineum HOM05D001191 ORTHO05D000979 7.5e-10 67.8 121 38.0
Sed0017375 Sechium edule HOM05D001191 ORTHO05D000979 7.5e-10 67.8 127 37.8
Oeu025270.1 Olea europaea HOM05D001191 ORTHO05D000979 9.8e-10 67.4 100 45.0
DCAR_008157 Daucus carota HOM05D001191 ORTHO05D000979 1.3e-09 67.0 95 45.3
unitig_21.g20236 Utricularia gibba HOM05D001191 ORTHO05D000979 1.7e-09 66.6 92 43.5
MD10G1322300 Malus domestica HOM05D001191 ORTHO05D000979 2.2e-09 66.2 127 35.4
CAN.G569.3 Capsicum annuum HOM05D001191 ORTHO05D000979 2.8e-09 65.9 95 44.2
AT1G62050 Arabidopsis thaliana HOM05D001191 ORTHO05D000979 3.7e-09 65.5 135 35.6
PGR004G2839 Punica granatum HOM05D001191 ORTHO05D000979 4.8e-09 65.1 95 47.4
Prupe.4G019600 Prunus persica HOM05D001191 ORTHO05D000979 6.3e-09 64.7 128 35.2
Carub.0002s0296 Capsella rubella HOM05D001191 ORTHO05D000979 8.3e-09 64.3 137 35.8
arahy.Tifrunner.gnm1.ann1.KZ8DRY Arachis hypogaea HOM05D001191 ORTHO05D000979 5.4e-08 61.6 124 38.7
CARHR050130 Cardamine hirsuta HOM05D001191 ORTHO05D000979 7.0e-08 61.2 135 34.8
AUR62021939 Chenopodium quinoa HOM05D001191 ORTHO05D000979 2.0e-07 59.7 154 31.8
Atru.chr10.2237 Acer truncatum HOM05D001191 ORTHO05D000979 4.5e-07 58.5 169 29.0
BcaC02g10513 Brassica carinata HOM05D001191 ORTHO05D000979 4.5e-07 58.5 140 33.6
C04p28050 Brassica napus HOM05D001191 ORTHO05D000979 4.5e-07 58.5 140 33.6
BolC4t24349H Brassica oleracea HOM05D001191 ORTHO05D000979 4.5e-07 58.5 140 33.6
BcaC06g31878 Brassica carinata HOM05D001191 ORTHO05D000979 1.0e-06 57.4 143 32.9
AUR62012716 Chenopodium quinoa HOM05D001191 ORTHO05D000979 1.7e-06 56.6 154 30.5
arahy.Tifrunner.gnm1.ann1.1TFV27 Arachis hypogaea HOM05D001191 ORTHO05D000979 3.8e-06 55.5 132 33.3
GSVIVG01004564001 Vitis vinifera HOM05D001191 ORTHO05D000979 6.6e-06 54.7 35 71.4


User provided reference genes

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