Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 2.0e-68 262.7 174 100.0
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 6.9e-61 237.7 175 92.6
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 1.2e-49 200.3 131 81.7
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 1.3e-46 190.3 177 71.2
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 1.7e-46 189.9 122 82.8
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 7.0e-45 184.5 130 76.2
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 1.0e-43 180.6 133 72.9
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 1.0e-43 180.6 128 79.7
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 1.3e-43 180.3 131 78.6
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 2.9e-43 179.1 179 68.7
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 8.5e-43 177.6 130 76.2
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 1.1e-42 177.2 131 77.1
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.5e-42 176.8 130 76.9
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 1.5e-42 176.8 121 81.0
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 1.5e-42 176.8 133 75.2
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 1.5e-42 176.8 131 77.1
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 3.2e-42 175.6 121 76.9
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 5.5e-42 174.9 132 78.0
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 5.5e-42 174.9 131 75.6
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 5.5e-42 174.9 130 74.6
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 1.6e-41 173.3 132 77.3
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 1.6e-41 173.3 129 76.7
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 1.6e-41 173.3 124 75.8
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 2.1e-41 172.9 128 76.6
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 2.1e-41 172.9 128 76.6
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 2.7e-41 172.6 135 72.6
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 2.7e-41 172.6 120 78.3
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 8.0e-41 171.0 124 74.2
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 1.0e-40 170.6 128 76.6
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 1.4e-40 170.2 127 74.8
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 1.4e-40 170.2 123 74.0
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 1.4e-40 170.2 123 74.0
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 1.8e-40 169.9 133 71.4
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 2.3e-40 169.5 131 74.8
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 2.3e-40 169.5 134 71.6
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 3.0e-40 169.1 123 74.0
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 4.0e-40 168.7 183 56.8
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 6.7e-40 167.9 130 73.1
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 6.7e-40 167.9 131 75.6
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 8.8e-40 167.5 131 73.3
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 1.5e-39 166.8 130 72.3
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 1.5e-39 166.8 132 72.7
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 2.0e-39 166.4 122 74.6
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 2.6e-39 166.0 119 78.2
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 2.6e-39 166.0 124 75.0
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 4.4e-39 165.2 132 68.9
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 5.7e-39 164.9 128 71.9
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 7.5e-39 164.5 126 77.0
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 9.7e-39 164.1 122 74.6
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 9.7e-39 164.1 125 72.0
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 9.7e-39 164.1 130 70.8
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 1.3e-38 163.7 118 76.3
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 1.3e-38 163.7 118 76.3
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 1.7e-38 163.3 129 74.4
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 2.8e-38 162.5 130 70.0
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 4.8e-38 161.8 170 58.8
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 8.2e-38 161.0 139 70.5
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 1.1e-37 160.6 126 72.2
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 2.4e-37 159.5 130 72.3
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 9.1e-37 157.5 124 71.8
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 1.2e-36 157.1 175 64.0
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 1.6e-36 156.8 135 68.1
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 2.0e-36 156.4 137 68.6
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 2.7e-36 156.0 128 72.7
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 2.7e-36 156.0 132 68.2
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 4.5e-36 155.2 118 72.9
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 4.5e-36 155.2 112 73.2
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 4.5e-36 155.2 125 69.6
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 5.9e-36 154.8 123 69.9
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 7.7e-36 154.5 136 66.2
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 2.2e-35 152.9 120 72.5
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 2.2e-35 152.9 137 66.4
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 2.9e-35 152.5 97 81.4
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 5.0e-35 151.8 117 74.4
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 1.1e-34 150.6 124 70.2
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 3.2e-34 149.1 126 69.8
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 5.5e-34 148.3 125 68.8
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 2.7e-33 146.0 199 59.8
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 3.0e-32 142.5 96 79.2
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 4.0e-32 142.1 129 65.9
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 4.0e-32 142.1 129 65.9
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 4.0e-32 142.1 129 65.9
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 4.0e-32 142.1 186 51.6
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 1.2e-31 140.6 129 65.1
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 1.2e-31 140.6 132 61.4
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 1.5e-31 140.2 83 85.5
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 2.0e-31 139.8 81 87.7
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 2.6e-31 139.4 132 60.6
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 3.4e-31 139.0 132 62.1
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 3.4e-31 139.0 130 61.5
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 3.4e-31 139.0 130 63.1
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 4.4e-31 138.7 130 62.3
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 4.4e-31 138.7 130 62.3
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 4.4e-31 138.7 130 62.3
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 5.7e-31 138.3 120 70.0
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 1.3e-30 137.1 119 67.2
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 1.7e-30 136.7 156 55.8
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 2.8e-30 136.0 93 75.3
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 2.8e-30 136.0 138 58.7
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 6.3e-30 134.8 132 60.6
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 6.3e-30 134.8 85 82.4
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 6.3e-30 134.8 139 59.7
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 1.1e-29 134.0 77 88.3
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 3.1e-29 132.5 127 62.2
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 7.0e-29 131.3 126 61.9
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 7.0e-29 131.3 96 72.9
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 1.2e-28 130.6 125 57.6
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 1.2e-28 130.6 76 86.8
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 2.0e-28 129.8 125 61.6
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 2.0e-28 129.8 127 59.8
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 2.7e-28 129.4 130 60.0
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 2.7e-28 129.4 130 60.0
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 2.7e-28 129.4 126 60.3
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 2.3e-27 126.3 118 66.1
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 2.8e-25 119.4 118 61.0
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 4.7e-25 118.6 133 57.9
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 3.0e-24 115.9 77 81.8
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 8.9e-24 114.4 125 56.0
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 2.2e-22 109.8 116 56.0
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 3.7e-22 109.0 88 67.0
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 7.0e-21 104.8 112 55.4
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 1.6e-20 103.6 89 65.2
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 2.3e-19 99.8 78 67.9
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 2.9e-19 99.4 242 35.1
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 6.1e-17 91.7 91 60.4
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 1.2e-15 87.4 134 47.0
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 8.3e-14 81.3 83 54.2
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 1.3e-11 73.9 90 70.0
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 1.5e-10 70.5 83 51.8
MBI03_g28533_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 1.8e-08 63.5 82 50.0
Thecc.04G122800 Theobroma cacao HOM05D006149 ORTHO05D007341 3.1e-08 62.8 42 73.8
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 3.4e-07 59.3 67 46.3


User provided reference genes

Program Settings