Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 6.7e-176 620.5 307 100.0
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 1.2e-156 556.6 307 85.7
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 3.6e-153 545.0 307 85.0
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 4.0e-152 541.6 307 84.7
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 2.2e-150 535.8 307 84.0
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 3.7e-150 535.0 307 84.0
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 1.8e-149 532.7 307 83.4
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 2.0e-148 529.3 307 83.4
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 7.7e-148 527.3 307 82.1
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 7.7e-148 527.3 307 81.8
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.3e-147 526.6 307 83.1
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 2.2e-147 525.8 307 82.4
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 6.5e-147 524.2 307 81.8
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.5e-146 523.1 307 82.4
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 4.2e-146 521.5 307 81.4
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 9.4e-146 520.4 307 81.1
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 1.2e-145 520.0 307 81.4
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 1.2e-145 520.0 307 81.4
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 2.7e-145 518.8 307 80.5
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 4.0e-144 515.0 307 79.2
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 4.0e-144 515.0 307 80.5
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 5.2e-144 514.6 307 77.5
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 1.5e-143 513.1 307 79.5
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 5.7e-143 511.1 307 79.2
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 7.5e-143 510.8 307 78.5
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 7.5e-143 510.8 307 77.5
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 9.8e-143 510.4 307 79.2
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 9.8e-143 510.4 307 79.2
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 1.1e-141 506.9 307 78.5
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 1.1e-141 506.9 307 78.2
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 1.8e-141 506.1 307 78.5
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 2.4e-141 505.8 307 77.9
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 4.1e-141 505.0 307 77.9
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 7.0e-141 504.2 307 77.9
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 1.6e-140 503.1 307 79.5
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 4.5e-140 501.5 307 78.2
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 1.0e-139 500.4 307 77.5
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 1.7e-139 499.6 288 81.6
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 2.9e-139 498.8 307 77.2
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 2.9e-139 498.8 307 78.8
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 3.8e-139 498.4 304 76.0
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 3.8e-139 498.4 307 75.2
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 6.6e-139 497.7 307 78.5
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 8.6e-139 497.3 307 76.9
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 1.1e-138 496.9 307 77.5
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 1.1e-138 496.9 307 74.6
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 1.9e-138 496.1 307 77.2
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 1.9e-138 496.1 307 76.5
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 2.5e-138 495.7 307 78.2
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 3.3e-138 495.4 307 75.9
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 9.5e-138 493.8 306 76.1
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 2.8e-137 492.3 307 77.5
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 3.6e-137 491.9 307 77.5
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 4.7e-137 491.5 307 75.6
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 1.4e-136 490.0 307 76.9
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 1.4e-136 490.0 307 75.6
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 1.8e-136 489.6 307 75.2
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 2.3e-136 489.2 307 75.9
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 2.3e-136 489.2 307 74.9
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 4.0e-136 488.4 323 73.4
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 1.2e-135 486.9 391 64.2
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 3.4e-135 485.3 358 67.9
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 7.5e-135 484.2 306 73.2
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 2.9e-134 482.3 307 75.2
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 3.7e-134 481.9 307 73.9
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 1.4e-133 479.9 370 65.7
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 7.0e-133 477.6 307 73.9
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 3.0e-131 472.2 307 71.7
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 1.1e-130 470.3 371 62.8
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 8.9e-128 460.7 306 76.1
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 7.0e-125 451.1 314 74.2
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 7.0e-125 451.1 307 68.7
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 1.3e-123 446.8 307 72.0
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 9.5e-122 440.7 293 73.0
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.1e-120 437.2 277 75.1
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 2.3e-120 436.0 307 68.7
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 6.8e-120 434.5 276 75.0
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 1.7e-118 429.9 278 74.5
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 6.4e-118 427.9 277 71.8
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 1.3e-115 420.2 277 72.6
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 1.7e-115 419.9 312 64.7
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 1.2e-111 407.1 243 81.1
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 7.6e-111 404.4 310 62.6
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 6.4e-110 401.4 235 83.4
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 2.1e-105 386.3 307 63.8
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 4.0e-104 382.1 297 62.3
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 4.4e-103 378.6 306 58.5
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 7.6e-103 377.9 236 77.1
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 2.6e-79 299.7 317 50.5
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 4.2e-77 292.4 245 61.6
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 7.9e-76 288.1 190 69.5
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 1.8e-59 233.8 321 42.4
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 5.1e-59 232.3 131 80.2
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.7e-57 227.3 148 75.0
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 2.4e-56 223.4 567 28.6
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 3.1e-56 223.0 170 71.2
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 1.1e-53 214.5 284 44.0
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 3.5e-23 113.2 290 30.0
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 3.8e-22 109.8 72 70.8
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 6.6e-22 109.0 96 50.0
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 6.1e-20 102.4 88 60.2
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 4.6e-15 86.3 72 58.3
Rhsim08G0136300 Rhododendron simsii HOM05D007381 ORTHO05D006450 6.0e-07 59.3 53 60.4


User provided reference genes

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