Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g04578 Nelumbo nucifera HOM05D000726 ORTHO05D007554 1.3e-157 559.7 286 100.0
Nn4g25316 Nelumbo nucifera HOM05D000726 ORTHO05D007554 8.8e-138 493.8 285 89.8
TAR376G0399 Trochodendron aralioides HOM05D000726 ORTHO05D007554 3.0e-77 292.7 308 50.6
Dinv26921 Davidia involucrata HOM05D000726 ORTHO05D007554 1.0e-69 267.7 308 47.4
CSS0015479 Camellia sinensis var. sinensis HOM05D000726 ORTHO05D007554 1.1e-60 237.7 305 43.6
CSS0022432 Camellia sinensis var. sinensis HOM05D000726 ORTHO05D007554 2.5e-60 236.5 305 43.3
Actinidia36435 Actinidia chinensis HOM05D000726 ORTHO05D007554 5.7e-60 235.3 296 44.6
Haze_15292 Corylus avellana HOM05D000726 ORTHO05D007554 1.1e-58 231.1 302 44.0
Potri.007G055400 Populus trichocarpa HOM05D000726 ORTHO05D007554 2.4e-58 229.9 286 45.1
Duzib147G0272 Durio zibethinus HOM05D000726 ORTHO05D007554 7.6e-57 224.9 290 44.1
FAN05G3645 Fragaria x ananassa HOM05D000726 ORTHO05D007554 5.0e-56 222.2 312 41.0
QL06p039670 Quercus lobata HOM05D000726 ORTHO05D007554 6.5e-56 221.9 312 42.9
Cfa004123 Carpinus fangiana HOM05D000726 ORTHO05D007554 1.9e-55 220.3 302 42.4
Manes.13G112300 Manihot esculenta HOM05D000726 ORTHO05D007554 2.5e-55 219.9 295 44.4
FAN02G1686 Fragaria x ananassa HOM05D000726 ORTHO05D007554 4.2e-55 219.2 312 41.0
Rhsim10G0100700 Rhododendron simsii HOM05D000726 ORTHO05D007554 4.2e-55 219.2 291 41.6
Lj7A95G20 Lonicera japonica HOM05D000726 ORTHO05D007554 9.3e-55 218.0 269 46.5
CiPaw.01G005300 Carya illinoinensis HOM05D000726 ORTHO05D007554 3.6e-54 216.1 298 42.3
Nitab4.5_0001417g0030 Nicotiana tabacum HOM05D000726 ORTHO05D007554 4.6e-54 215.7 284 44.0
Aqoxy6G02647 Aquilegia oxysepala HOM05D000726 ORTHO05D007554 3.9e-53 212.6 276 45.7
RcHm_v2.0_Chr2g0138631 Rosa chinensis HOM05D000726 ORTHO05D007554 3.9e-53 212.6 297 41.4
MD02G1184600 Malus domestica HOM05D000726 ORTHO05D007554 6.7e-53 211.8 296 42.6
Hund16395 Selenicereus undatus HOM05D000726 ORTHO05D007554 5.7e-52 208.8 292 41.1
Sc03g0002340 Simmondsia chinensis HOM05D000726 ORTHO05D007554 9.7e-52 208.0 288 38.2
FAN14G0573 Fragaria x ananassa HOM05D000726 ORTHO05D007554 1.6e-51 207.2 297 40.7
Gohir.A11G215400 Gossypium hirsutum HOM05D000726 ORTHO05D007554 2.2e-51 206.8 289 42.2
TWI09G1290 Tripterygium wilfordii HOM05D000726 ORTHO05D007554 2.2e-51 206.8 308 40.9
FvH4_6g31560 Fragaria vesca HOM05D000726 ORTHO05D007554 3.7e-51 206.1 296 40.9
CANSAT01G3261 Cannabis sativa HOM05D000726 ORTHO05D007554 4.8e-51 205.7 291 39.2
FAN09G4729 Fragaria x ananassa HOM05D000726 ORTHO05D007554 4.8e-51 205.7 312 39.1
Gorai.007G222900 Gossypium raimondii HOM05D000726 ORTHO05D007554 1.4e-50 204.1 289 41.2
Nitab4.5_0006813g0010 Nicotiana tabacum HOM05D000726 ORTHO05D007554 4.1e-50 202.6 294 40.8
Gohir.D11G207900 Gossypium hirsutum HOM05D000726 ORTHO05D007554 5.3e-50 202.2 289 41.2
PGSC0003DMG400009094 Solanum tuberosum HOM05D000726 ORTHO05D007554 1.5e-49 200.7 286 43.4
Lalb_Chr09g0323571 Lupinus albus HOM05D000726 ORTHO05D007554 2.6e-49 199.9 311 38.3
CAN.G278.12 Capsicum annuum HOM05D000726 ORTHO05D007554 3.4e-49 199.5 285 41.4
EL10Ac6g15628 Beta vulgaris HOM05D000726 ORTHO05D007554 5.9e-49 198.7 287 39.7
Medtr5g015600 Medicago truncatula HOM05D000726 ORTHO05D007554 5.9e-49 198.7 322 37.0
vmacro05404 Vaccinium macrocarpon HOM05D000726 ORTHO05D007554 5.9e-49 198.7 305 38.0
Cc07_g07020 Coffea canephora HOM05D000726 ORTHO05D007554 1.7e-48 197.2 307 37.5
TPR.G34847 Trifolium pratense HOM05D000726 ORTHO05D007554 2.2e-48 196.8 310 38.4
Ciclev10024730m.g Citrus clementina HOM05D000726 ORTHO05D007554 6.5e-48 195.3 310 39.0
MSTRG.23676 Avicennia marina HOM05D000726 ORTHO05D007554 1.4e-47 194.1 305 37.7
Migut.H00354 Erythranthe guttata HOM05D000726 ORTHO05D007554 1.4e-47 194.1 285 39.3
arahy.Tifrunner.gnm1.ann1.1ZHU8Z Arachis hypogaea HOM05D000726 ORTHO05D007554 2.5e-47 193.4 308 36.7
Solyc03g044020.4 Solanum lycopersicum HOM05D000726 ORTHO05D007554 2.5e-47 193.4 282 40.8
AUR62040247 Chenopodium quinoa HOM05D000726 ORTHO05D007554 9.4e-47 191.4 282 39.4
Sopen03g007820 Solanum pennellii HOM05D000726 ORTHO05D007554 1.6e-46 190.7 282 40.8
AUR62003999 Chenopodium quinoa HOM05D000726 ORTHO05D007554 2.7e-46 189.9 282 39.4
Sabra07G0047700 Salix brachista HOM05D000726 ORTHO05D007554 4.6e-46 189.1 270 42.6
Ca_24700_v3 Cicer arietinum L. HOM05D000726 ORTHO05D007554 1.8e-45 187.2 310 37.1
Glyma.01G193500 Glycine max HOM05D000726 ORTHO05D007554 2.3e-45 186.8 313 37.1
SHI31766 Sapria himalayana HOM05D000726 ORTHO05D007554 1.5e-44 184.1 290 40.7
arahy.Tifrunner.gnm1.ann1.6361M0 Arachis hypogaea HOM05D000726 ORTHO05D007554 3.3e-44 183.0 285 38.2
PSO675G6338 Papaver somniferum HOM05D000726 ORTHO05D007554 3.3e-44 183.0 290 39.3
COL.COLO4_11566 Corchorus olitorius HOM05D000726 ORTHO05D007554 9.7e-44 181.4 261 42.1
Peaxi162Scf00118g01929 Petunia axillaris HOM05D000726 ORTHO05D007554 2.2e-43 180.3 281 41.3
Lsat_1_v5_gn_4_160781 Lactuca sativa HOM05D000726 ORTHO05D007554 6.3e-43 178.7 262 37.8
PSO541G0636 Papaver somniferum HOM05D000726 ORTHO05D007554 6.3e-43 178.7 292 38.4
Ah.03g140460 Amaranthus hybridus HOM05D000726 ORTHO05D007554 2.4e-42 176.8 284 37.7
HanXRQChr12g0373111 Helianthus annuus HOM05D000726 ORTHO05D007554 2.4e-42 176.8 280 39.3
SGA_v2.0_scaffold15G07449 Striga asiatica HOM05D000726 ORTHO05D007554 9.1e-42 174.9 300 37.3
CsaV3_6G044070 Cucumis sativus L. HOM05D000726 ORTHO05D007554 1.2e-41 174.5 284 39.4
Atru.BG.105.p Acer truncatum HOM05D000726 ORTHO05D007554 3.4e-41 172.9 265 40.0
Lj2g0006912 Lotus japonicus HOM05D000726 ORTHO05D007554 3.4e-41 172.9 289 36.7
MELO3C007629.2 Cucumis melo HOM05D000726 ORTHO05D007554 4.5e-41 172.6 287 37.3
VMungo1215G2083 Vigna mungo HOM05D000726 ORTHO05D007554 4.5e-41 172.6 307 37.8
Sed0012994 Sechium edule HOM05D000726 ORTHO05D007554 5.9e-41 172.2 292 39.4
Eucgr.H02305 Eucalyptus grandis HOM05D000726 ORTHO05D007554 7.7e-41 171.8 273 38.1
Phvul.002G011500 Phaseolus vulgaris HOM05D000726 ORTHO05D007554 7.7e-41 171.8 288 38.9
ClCG01G017520 Citrullus lanatus HOM05D000726 ORTHO05D007554 1.0e-40 171.4 286 40.9
HPP92_014040 Vanilla planifolia HOM05D000726 ORTHO05D007554 5.0e-40 169.1 282 33.7
Atru.chr3.177 Acer truncatum HOM05D000726 ORTHO05D007554 8.5e-40 168.3 266 40.2
GSVIVG01000124001 Vitis vinifera HOM05D000726 ORTHO05D007554 8.5e-40 168.3 186 46.2
CARHR056360 Cardamine hirsuta HOM05D000726 ORTHO05D007554 1.9e-39 167.2 276 37.3
Glyma.11G048366 Glycine max HOM05D000726 ORTHO05D007554 2.7e-38 163.3 298 34.2
DCAR_010826 Daucus carota HOM05D000726 ORTHO05D007554 3.6e-38 162.9 283 37.5
THA.LOC104819266 Tarenaya hassleriana HOM05D000726 ORTHO05D007554 7.9e-38 161.8 289 36.0
Aa31LG2G2150 Aethionema arabicum HOM05D000726 ORTHO05D007554 5.2e-37 159.1 275 36.4
Thhalv10023223m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 6.7e-37 158.7 296 34.5
PGR102G1358 Punica granatum HOM05D000726 ORTHO05D007554 1.5e-36 157.5 302 34.4
Thhalv10006613m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 2.6e-36 156.8 303 33.7
BcaB03g15339 Brassica carinata HOM05D000726 ORTHO05D007554 4.4e-36 156.0 274 35.8
BolC6t38979H Brassica oleracea HOM05D000726 ORTHO05D007554 4.4e-36 156.0 277 34.7
Carub.0002s1010 Capsella rubella HOM05D000726 ORTHO05D007554 5.7e-36 155.6 305 32.5
C06p38860 Brassica napus HOM05D000726 ORTHO05D007554 2.8e-35 153.3 277 34.7
Zm00001eb051460 Zea mays HOM05D000726 ORTHO05D007554 3.7e-35 152.9 266 36.1
SalBow3G2688 Salvia bowleyana HOM05D000726 ORTHO05D007554 1.1e-34 151.4 278 38.1
Sp5g19220 Schrenkiella parvula HOM05D000726 ORTHO05D007554 1.4e-34 151.0 281 34.2
Cpa.g.sc6.25 Carica papaya HOM05D000726 ORTHO05D007554 2.4e-34 150.2 168 45.2
AL2G19510 Arabidopsis lyrata HOM05D000726 ORTHO05D007554 5.3e-34 149.1 281 33.5
Thhalv10000018m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 2.2e-32 143.7 296 32.1
BraA07t30892Z Brassica rapa HOM05D000726 ORTHO05D007554 3.0e-29 133.3 265 34.3
Thhalv10001287m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 6.7e-29 132.1 186 38.7
unitig_0.g505 Utricularia gibba HOM05D000726 ORTHO05D007554 1.2e-28 131.3 211 36.5
Psat2g171280 Pisum sativum HOM05D000726 ORTHO05D007554 6.3e-27 125.6 268 32.8
AT1G64960 Arabidopsis thaliana HOM05D000726 ORTHO05D007554 4.5e-25 119.4 283 29.0
ATR0208G027 Amborella trichopoda HOM05D000726 ORTHO05D007554 6.8e-21 105.5 140 42.9
ECA232G2303 Erigeron canadensis HOM05D000726 ORTHO05D007554 2.4e-18 97.1 277 26.7
SEGI_23696 Sequoiadendron giganteum HOM05D000726 ORTHO05D000001 4.5e-17 92.8 147 37.4
Thecc.01G071800 Theobroma cacao HOM05D000726 ORTHO05D007554 5.5e-15 85.9 143 40.6
CDE04G3158 Ceratophyllum demersum HOM05D000726 ORTHO05D007554 4.0e-13 79.7 85 50.6
Prupe.6G221900 Prunus persica HOM05D000726 ORTHO05D007554 5.2e-13 79.3 126 39.7
ATR0208G028 Amborella trichopoda HOM05D000726 ORTHO05D007554 6.3e-11 72.4 127 36.2
Os03g0616500 Oryza sativa ssp. japonica HOM05D000726 ORTHO05D007554 2.4e-10 70.5 113 37.2
Cpa.g.sc6.26 Carica papaya HOM05D000726 ORTHO05D007554 4.3e-07 59.7 73 46.6


User provided reference genes

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