Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 2.5e-192 675.2 331 100.0
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 7.4e-104 381.3 338 62.4
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 5.2e-73 278.9 341 50.7
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 5.2e-65 252.3 316 49.7
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 2.0e-61 240.4 337 44.8
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 4.4e-56 222.6 336 42.6
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 4.4e-56 222.6 338 42.9
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 2.4e-54 216.9 347 42.9
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 4.1e-54 216.1 353 43.3
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 7.0e-54 215.3 335 43.3
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 5.0e-52 209.1 340 41.2
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 1.5e-51 207.6 337 43.0
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 5.6e-51 205.7 340 42.9
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 1.6e-50 204.1 310 43.5
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 2.8e-50 203.4 339 41.9
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 1.0e-49 201.4 343 42.6
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 1.4e-49 201.1 344 41.0
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 6.8e-49 198.7 347 41.5
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 8.9e-49 198.4 339 41.6
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 1.5e-48 197.6 347 41.2
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 2.6e-48 196.8 348 42.0
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 2.6e-48 196.8 347 41.2
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 5.7e-48 195.7 347 41.2
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 7.5e-48 195.3 334 41.3
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 4.9e-47 192.6 351 39.3
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 4.1e-46 189.5 343 40.5
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 2.0e-45 187.2 334 38.0
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 5.9e-45 185.7 340 39.1
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 1.0e-44 184.9 340 40.6
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 1.0e-44 184.9 341 39.9
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 2.3e-44 183.7 318 42.1
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 3.0e-44 183.3 344 37.2
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 3.9e-44 183.0 346 40.8
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 4.3e-43 179.5 338 37.9
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 4.3e-43 179.5 337 40.4
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 7.3e-43 178.7 336 39.6
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 9.5e-43 178.3 341 39.6
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 1.2e-42 177.9 344 37.5
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 8.0e-42 175.3 311 39.2
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 1.8e-41 174.1 339 41.0
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 1.8e-41 174.1 395 36.7
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 3.1e-41 173.3 343 35.3
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 6.8e-41 172.2 347 35.7
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.5e-40 171.0 334 40.4
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.0e-40 170.6 332 40.4
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 2.0e-40 170.6 312 41.0
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 5.8e-40 169.1 346 40.8
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 1.3e-39 167.9 337 37.1
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 4.9e-39 166.0 337 36.8
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 1.9e-38 164.1 328 38.1
CSS0045592 Camellia sinensis var. sinensis HOM05D006273 ORTHO05D007607 2.4e-38 163.7 250 42.8
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 7.8e-37 158.7 394 34.5
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.3e-36 157.1 333 39.0
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.3e-36 157.1 333 39.0
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 2.3e-36 157.1 328 37.8
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 3.0e-36 156.8 321 36.8
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 6.2e-34 149.1 334 38.9
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 6.2e-34 149.1 331 38.7
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 3.1e-33 146.7 363 33.6
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 3.1e-33 146.7 346 35.8
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 5.2e-33 146.0 314 34.7
ATR1153G071 Amborella trichopoda HOM05D006273 ORTHO05D007607 1.3e-28 131.3 353 35.1
Hund24173 Selenicereus undatus HOM05D006273 ORTHO05D007607 3.0e-28 130.2 318 34.6
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 1.5e-27 127.9 311 35.4
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 1.5e-27 127.9 331 34.4
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 5.6e-27 125.9 285 35.8
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 7.3e-27 125.6 327 31.8
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 2.1e-26 124.0 334 33.5
Ah.01g002130 Amaranthus hybridus HOM05D006273 ORTHO05D007607 1.8e-25 120.9 301 32.2
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 2.6e-24 117.1 325 32.9
HPP92_007764 Vanilla planifolia HOM05D006273 ORTHO05D007607 3.4e-24 116.7 351 33.3
Phvul.007G045300 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 2.9e-23 113.6 331 33.2
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 4.9e-23 112.8 337 32.3
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 6.4e-23 112.5 329 33.1
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 1.1e-22 111.7 352 31.0
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 1.1e-22 111.7 329 34.3
Os03g0203000 Oryza sativa ssp. japonica HOM05D006273 ORTHO05D007607 1.4e-22 111.3 305 32.8
AUR62017546 Chenopodium quinoa HOM05D006273 ORTHO05D007607 3.2e-22 110.2 208 35.6
EL10Ac9g22769 Beta vulgaris HOM05D006273 ORTHO05D007607 7.1e-22 109.0 353 29.5
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 1.6e-21 107.8 337 32.3
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 7.8e-21 105.5 310 32.6
Nitab4.5_0001105g0020 Nicotiana tabacum HOM05D006273 ORTHO05D007607 2.3e-20 104.0 171 39.2
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 3.9e-20 103.2 227 33.5
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 8.6e-20 102.1 335 33.1
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 8.6e-20 102.1 334 32.9
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 1.1e-19 101.7 338 33.7
Migut.N01140 Erythranthe guttata HOM05D006273 ORTHO05D007607 1.5e-19 101.3 331 31.1
Zm00001eb007690 Zea mays HOM05D006273 ORTHO05D007607 1.5e-19 101.3 344 34.6
CDE02G4649 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 1.9e-19 100.9 254 35.4
Sp3g17690 Schrenkiella parvula HOM05D006273 ORTHO05D007607 2.5e-19 100.5 337 31.2
Hund24138 Selenicereus undatus HOM05D006273 ORTHO05D007607 2.5e-19 100.5 214 36.9
Aa31LG8G6430 Aethionema arabicum HOM05D006273 ORTHO05D007607 4.3e-19 99.8 310 32.9
Lalb_Chr06g0165121 Lupinus albus HOM05D006273 ORTHO05D007607 5.6e-19 99.4 231 34.2
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 1.2e-18 98.2 331 32.3
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 1.6e-18 97.8 331 31.4
Lj1g0018578 Lotus japonicus HOM05D006273 ORTHO05D007607 2.1e-18 97.4 206 32.5
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 3.6e-18 96.7 345 31.6
Atru.chr5.2357 Acer truncatum HOM05D006273 ORTHO05D007607 8.1e-18 95.5 242 33.5
Glyma.11G001800 Glycine max HOM05D006273 ORTHO05D007607 1.4e-17 94.7 284 30.6
BcaB06g26035 Brassica carinata HOM05D006273 ORTHO05D007607 1.8e-17 94.4 330 31.2
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 3.1e-17 93.6 337 31.5
CDE04G2504 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 8.9e-17 92.0 168 39.3
AUR62044228 Chenopodium quinoa HOM05D006273 ORTHO05D007607 3.4e-16 90.1 149 40.3
TWI59G0086 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 7.6e-16 89.0 197 35.5
Potri.001G295000 Populus trichocarpa HOM05D006273 ORTHO05D007607 1.3e-15 88.2 149 38.3
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 3.8e-15 86.7 340 30.3
BcaC05g28438 Brassica carinata HOM05D006273 ORTHO05D007607 3.2e-14 83.6 336 30.1
TPR.G8308 Trifolium pratense HOM05D006273 ORTHO05D007607 4.6e-13 79.7 161 37.3
AUR62025214 Chenopodium quinoa HOM05D000052 ORTHO05D007607 7.8e-13 79.0 207 33.8
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 2.3e-12 77.4 223 31.8
Aqoxy6G02626 Aquilegia oxysepala HOM05D002857 ORTHO05D007919 3.0e-12 77.0 219 29.7
AT3G19650 Arabidopsis thaliana HOM05D006273 ORTHO05D007607 6.6e-12 75.9 331 28.4
Ca_11032_v3 Cicer arietinum L. HOM05D006273 ORTHO05D007607 3.3e-11 73.6 147 36.7
Oeu037282.1 Olea europaea HOM05D006273 ORTHO05D007607 4.3e-11 73.2 239 31.4
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 4.3e-11 73.2 335 27.8
Medtr1g106210 Medicago truncatula HOM05D006273 ORTHO05D007607 8.1e-10 68.9 273 30.0
SHI05153 Sapria himalayana HOM05D006273 ORTHO05D007607 1.1e-09 68.6 322 30.1
Actinidia00372 Actinidia chinensis HOM05D006273 ORTHO05D007607 5.3e-09 66.2 103 43.7
Dinv15806 Davidia involucrata HOM05D006273 ORTHO05D007607 1.2e-08 65.1 71 53.5
SEGI_25142 Sequoiadendron giganteum HOM05D006273 ORTHO05D007607 1.2e-08 65.1 234 32.9
FvH4_2g03741 Fragaria vesca HOM05D006273 ORTHO05D007607 2.6e-08 63.9 118 41.5
AL3G33090 Arabidopsis lyrata HOM05D006273 ORTHO05D007607 4.2e-06 56.6 331 26.9


User provided reference genes

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