Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g04493 Nelumbo nucifera HOM05D007753 ORTHO05D009385 2.4e-68 261.9 123 100.0
Nn8g39391 Nelumbo nucifera HOM05D007753 ORTHO05D009385 8.4e-29 130.6 74 82.4
Nn2g11967 Nelumbo nucifera HOM05D007753 ORTHO05D009385 2.7e-19 99.0 80 61.2
TAR626G0406 Trochodendron aralioides HOM05D007753 ORTHO05D009385 2.5e-17 92.4 55 72.7
TAR626G0264 Trochodendron aralioides HOM05D007753 ORTHO05D009385 1.3e-16 90.1 55 70.9
PGR102G0169 Punica granatum HOM05D007753 ORTHO05D009385 1.1e-12 77.0 103 42.7
CSS0017457 Camellia sinensis var. sinensis HOM05D007753 ORTHO05D009385 7.2e-12 74.3 63 50.8
Gorai.009G130300 Gossypium raimondii HOM05D007753 ORTHO05D009385 2.7e-11 72.4 81 42.0
Thecc.06G071000 Theobroma cacao HOM05D007753 ORTHO05D009385 6.1e-11 71.2 76 47.4
Ciclev10027449m.g Citrus clementina HOM05D007753 ORTHO05D009385 7.9e-11 70.9 56 55.4
Gohir.D05G126300 Gossypium hirsutum HOM05D007753 ORTHO05D009385 1.4e-10 70.1 81 40.7
Sabra03G0036100 Salix brachista HOM05D007753 ORTHO05D009385 3.0e-10 68.9 85 44.7
COL.COLO4_12908 Corchorus olitorius HOM05D007753 ORTHO05D009385 6.7e-10 67.8 77 45.5
Rhsim08G0215900 Rhododendron simsii HOM05D007753 ORTHO05D009385 1.1e-09 67.0 57 49.1
Gohir.A05G125300 Gossypium hirsutum HOM05D007753 ORTHO05D009385 2.0e-09 66.2 81 39.5
CiPaw.01G244900 Carya illinoinensis HOM05D007753 ORTHO05D009385 5.7e-09 64.7 59 50.8
Eucgr.F02545 Eucalyptus grandis HOM05D007753 ORTHO05D009385 5.7e-09 64.7 59 49.2
Cfa002006 Carpinus fangiana HOM05D007753 ORTHO05D009385 1.3e-08 63.5 55 54.5
Haze_16518 Corylus avellana HOM05D007753 ORTHO05D009385 1.3e-08 63.5 57 52.6
Potri.003G062000 Populus trichocarpa HOM05D007753 ORTHO05D009385 1.3e-08 63.5 56 50.0
SGA_v2.0_scaffold5G02663 Striga asiatica HOM05D007753 ORTHO05D009385 1.7e-08 63.2 55 47.3
Prupe.3G081200 Prunus persica HOM05D007753 ORTHO05D009385 2.2e-08 62.8 55 47.3
Cfa015409 Carpinus fangiana HOM05D007753 ORTHO05D009385 2.8e-08 62.4 58 51.7
QL05p027928 Quercus lobata HOM05D007753 ORTHO05D009385 2.8e-08 62.4 110 36.4
Rhsim03G0103900 Rhododendron simsii HOM05D007753 ORTHO05D009385 4.8e-08 61.6 75 41.3
vmacro18967 Vaccinium macrocarpon HOM05D007753 ORTHO05D009385 4.8e-08 61.6 108 34.3
Atru.chr1.3069 Acer truncatum HOM05D007753 ORTHO05D009385 6.3e-08 61.2 51 51.0
MELO3C017898.2 Cucumis melo HOM05D007753 ORTHO05D009385 6.3e-08 61.2 70 42.9
Nitab4.5_0006574g0050 Nicotiana tabacum HOM05D007753 ORTHO05D009385 6.3e-08 61.2 73 43.8
Peaxi162Scf00274g00826 Petunia axillaris HOM05D007753 ORTHO05D009385 8.2e-08 60.8 47 51.1
Nitab4.5_0002257g0030 Nicotiana tabacum HOM05D007753 ORTHO05D009385 1.4e-07 60.1 57 49.1
PGSC0003DMG400000606 Solanum tuberosum HOM05D007753 ORTHO05D009385 1.4e-07 60.1 75 41.3
ClCG00G004440 Citrullus lanatus HOM05D007753 ORTHO05D009385 4.1e-07 58.5 53 47.2
ClCG07G012780 Citrullus lanatus HOM05D007753 ORTHO05D009385 4.1e-07 58.5 53 47.2
Solyc03g116480.1 Solanum lycopersicum HOM05D007753 ORTHO05D009385 4.1e-07 58.5 62 43.5
Sopen03g035370 Solanum pennellii HOM05D007753 ORTHO05D009385 4.1e-07 58.5 62 43.5
Glyma.08G210700 Glycine max HOM05D007753 ORTHO05D009385 7.0e-07 57.8 71 45.1
VMungo0331G0527 Vigna mungo HOM05D007753 ORTHO05D009385 7.0e-07 57.8 47 61.7
Manes.11G053400 Manihot esculenta HOM05D007753 ORTHO05D009385 9.1e-07 57.4 79 40.5
MSTRG.11118 Avicennia marina HOM05D007753 ORTHO05D009385 1.2e-06 57.0 98 37.8
CsaV3_4G001420 Cucumis sativus L. HOM05D007753 ORTHO05D009385 1.2e-06 57.0 70 41.4
Glyma.07G032000 Glycine max HOM05D007753 ORTHO05D009385 1.2e-06 57.0 49 59.2
Cpa.g.sc10.226 Carica papaya HOM05D007753 ORTHO05D009385 1.5e-06 56.6 74 35.1
Aqoxy7G02101 Aquilegia oxysepala HOM05D007753 ORTHO05D009385 2.6e-06 55.8 58 50.0
FAN05G5641 Fragaria x ananassa HOM05D007753 ORTHO05D009385 2.6e-06 55.8 110 37.3
Hma1.2p1_0515F.1_g170220 Hydrangea macrophylla HOM05D007753 ORTHO05D009385 4.5e-06 55.1 56 41.1
Sed0009628 Sechium edule HOM05D007753 ORTHO05D009385 4.5e-06 55.1 56 42.9
Phvul.010G154000 Phaseolus vulgaris HOM05D007753 ORTHO05D009385 7.7e-06 54.3 62 50.0


User provided reference genes

Program Settings