Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g04467 Nelumbo nucifera HOM05D004371 ORTHO05D002186 7.6e-54 213.8 123 100.0
Nn5g31361 Nelumbo nucifera HOM05D004371 ORTHO05D002186 1.7e-21 106.3 176 54.5
Nn5g31363 Nelumbo nucifera HOM05D004371 ORTHO05D002186 1.3e-16 90.1 142 57.7
Nn5g31362 Nelumbo nucifera HOM05D004371 ORTHO05D002186 6.3e-16 87.8 142 57.0
Nn1g04458 Nelumbo nucifera HOM05D004371 ORTHO05D002186 3.6e-11 72.0 168 46.4
CiPaw.02G005700 Carya illinoinensis HOM05D004371 ORTHO05D002186 1.7e-08 63.2 160 36.2
Oeu057260.2 Olea europaea HOM05D004371 ORTHO05D002186 2.8e-08 62.4 76 53.9
Dinv35916 Davidia involucrata HOM05D004371 ORTHO05D002186 1.1e-07 60.5 77 50.6
TWI56G0459 Tripterygium wilfordii HOM05D004371 ORTHO05D002186 1.8e-07 59.7 169 34.3
Gohir.D05G264800 Gossypium hirsutum HOM05D004371 ORTHO05D002186 2.4e-07 59.3 118 38.1
Gorai.009G276600 Gossypium raimondii HOM05D004371 ORTHO05D002186 2.4e-07 59.3 118 38.1
Dinv26873 Davidia involucrata HOM05D004371 ORTHO05D002186 3.1e-07 58.9 139 38.1
Cc10_g05190 Coffea canephora HOM05D004371 ORTHO05D002186 4.1e-07 58.5 164 32.9
Migut.C00522 Erythranthe guttata HOM05D004371 ORTHO05D002186 4.1e-07 58.5 82 48.8
Glyma.17G237800 Glycine max HOM05D004371 ORTHO05D002186 5.3e-07 58.2 125 39.2
Lj4C65T11 Lonicera japonica HOM05D004371 ORTHO05D002186 5.3e-07 58.2 80 48.8
Peaxi162Scf00266g00081 Petunia axillaris HOM05D004371 ORTHO05D002186 5.3e-07 58.2 130 37.7
ATR0205G008 Amborella trichopoda HOM05D004371 ORTHO05D002186 9.1e-07 57.4 122 42.6
Sabra14G0014700 Salix brachista HOM05D004371 ORTHO05D002186 9.1e-07 57.4 128 39.8
TWI09G1286 Tripterygium wilfordii HOM05D004371 ORTHO05D002186 9.1e-07 57.4 139 38.1
CDE07G1639 Ceratophyllum demersum HOM05D004371 ORTHO05D002186 1.5e-06 56.6 119 38.7
Potri.002G122300 Populus trichocarpa HOM05D004371 ORTHO05D002186 1.5e-06 56.6 75 52.0
Thecc.08G095700 Theobroma cacao HOM05D004371 ORTHO05D002186 1.5e-06 56.6 119 38.7
PGSC0003DMG400003310 Solanum tuberosum HOM05D004371 ORTHO05D002186 2.6e-06 55.8 124 37.1
ClCG05G020280 Citrullus lanatus HOM05D004371 ORTHO05D002186 3.4e-06 55.5 142 35.2
COL.COLO4_03644 Corchorus olitorius HOM05D004371 ORTHO05D002186 3.4e-06 55.5 119 38.7
Potri.014G022100 Populus trichocarpa HOM05D004371 ORTHO05D002186 3.4e-06 55.5 128 39.1
Aqoxy6G02847 Aquilegia oxysepala HOM05D004371 ORTHO05D002186 4.5e-06 55.1 72 51.4
RcHm_v2.0_Chr6g0308861 Rosa chinensis HOM05D004371 ORTHO05D002186 4.5e-06 55.1 75 48.0
Gohir.A05G262600 Gossypium hirsutum HOM05D004371 ORTHO05D002186 5.9e-06 54.7 119 37.0
Nitab4.5_0001984g0070 Nicotiana tabacum HOM05D004371 ORTHO05D002186 7.7e-06 54.3 128 37.5
HPP92_004762 Vanilla planifolia HOM05D004371 ORTHO05D002186 7.7e-06 54.3 73 50.7
HPP92_027899 Vanilla planifolia HOM05D004371 ORTHO05D002186 7.7e-06 54.3 73 50.7


User provided reference genes

Program Settings