Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g04462 Nelumbo nucifera HOM05D000253 ORTHO05D000149 6.7e-18 92.8 42 100.0
Nn1g09161 Nelumbo nucifera HOM05D000253 ORTHO05D000149 2.5e-12 74.3 40 80.0
Dinv07701 Davidia involucrata HOM05D000253 ORTHO05D000149 1.3e-10 68.6 33 87.9
Lj8A100T100 Lonicera japonica HOM05D000253 ORTHO05D000149 3.0e-10 67.4 34 79.4
Dinv01123 Davidia involucrata HOM05D000253 ORTHO05D000149 3.9e-10 67.0 33 84.8
Aqoxy4G00308 Aquilegia oxysepala HOM05D000253 ORTHO05D000149 1.1e-09 65.5 39 66.7
Aqoxy4G00313 Aquilegia oxysepala HOM05D000253 ORTHO05D000149 1.1e-09 65.5 39 66.7
TAR629G3506 Trochodendron aralioides HOM05D000253 ORTHO05D000149 1.9e-09 64.7 39 69.2
Cc05_g08440 Coffea canephora HOM05D000253 ORTHO05D000149 3.3e-09 63.9 37 73.0
ECA240G4734 Erigeron canadensis HOM05D000253 ORTHO05D000149 4.3e-09 63.5 37 67.6
CiPaw.04G133800 Carya illinoinensis HOM05D000253 ORTHO05D000149 7.4e-09 62.8 33 78.8
Migut.M00266 Erythranthe guttata HOM05D000253 ORTHO05D000149 7.4e-09 62.8 37 73.0
MBI01_g09937_MAGBIO Magnolia biondii HOM05D000253 ORTHO05D000149 9.6e-09 62.4 37 70.3
QL08p042065 Quercus lobata HOM05D000253 ORTHO05D000149 9.6e-09 62.4 34 73.5
Dinv19760 Davidia involucrata HOM05D000253 ORTHO05D000149 1.3e-08 62.0 33 72.7
Dinv19762 Davidia involucrata HOM05D000253 ORTHO05D000149 1.3e-08 62.0 33 75.8
Dinv19764 Davidia involucrata HOM05D000253 ORTHO05D000149 1.3e-08 62.0 33 75.8
Dinv19766 Davidia involucrata HOM05D000253 ORTHO05D000149 1.3e-08 62.0 33 72.7
Dinv01122 Davidia involucrata HOM05D000253 ORTHO05D000149 1.6e-08 61.6 37 67.6
Dinv07698 Davidia involucrata HOM05D000253 ORTHO05D000149 1.6e-08 61.6 37 67.6
Migut.M00269 Erythranthe guttata HOM05D000253 ORTHO05D000149 1.6e-08 61.6 33 75.8
SalBow7G0596 Salvia bowleyana HOM05D000253 ORTHO05D000149 1.6e-08 61.6 33 75.8
SalBow7G3732 Salvia bowleyana HOM05D000253 ORTHO05D000149 1.6e-08 61.6 33 75.8
Cfa021364 Carpinus fangiana HOM05D000253 ORTHO05D000149 2.8e-08 60.8 37 70.3
CiPaw.04G133700 Carya illinoinensis HOM05D000253 ORTHO05D000149 2.8e-08 60.8 36 72.2
Duzib187G1098 Durio zibethinus HOM05D000253 ORTHO05D000149 2.8e-08 60.8 35 68.6
TWI23G0289 Tripterygium wilfordii HOM05D000253 ORTHO05D000149 2.8e-08 60.8 39 64.1
Haze_13407 Corylus avellana HOM05D000253 ORTHO05D000149 3.7e-08 60.5 31 80.6
unitig_747.g21615 Utricularia gibba HOM05D000253 ORTHO05D000149 3.7e-08 60.5 32 75.0
Zm00001eb155120 Zea mays HOM05D000253 ORTHO05D000149 3.7e-08 60.5 36 72.2
CiPaw.03G194500 Carya illinoinensis HOM05D000253 ORTHO05D000149 4.8e-08 60.1 39 61.5
Haze_13406 Corylus avellana HOM05D000253 ORTHO05D000149 4.8e-08 60.1 32 78.1
CAN.G1148.7 Capsicum annuum HOM05D000253 ORTHO05D000149 6.2e-08 59.7 33 72.7
Sabra03G0069400 Salix brachista HOM05D000253 ORTHO05D000149 6.2e-08 59.7 36 66.7
COL.COLO4_33597 Corchorus olitorius HOM05D000253 ORTHO05D000149 1.1e-07 58.9 39 59.0
Dinv12389 Davidia involucrata HOM05D000253 ORTHO05D000149 1.1e-07 58.9 33 72.7
Lj3g0004436 Lotus japonicus HOM05D000253 ORTHO05D000149 1.1e-07 58.9 38 65.8
PSO782G4111 Papaver somniferum HOM05D000253 ORTHO05D000149 1.1e-07 58.9 30 76.7
THA.LOC104802961 Tarenaya hassleriana HOM05D000253 ORTHO05D000149 1.1e-07 58.9 39 61.5
MSTRG.6785 Avicennia marina HOM05D000253 ORTHO05D000149 1.4e-07 58.5 33 69.7
COL.COLO4_33598 Corchorus olitorius HOM05D000253 ORTHO05D000149 1.4e-07 58.5 35 62.9
Peaxi162Scf00384g00015 Petunia axillaris HOM05D000253 ORTHO05D000149 1.4e-07 58.5 33 69.7
Peaxi162Scf00384g00028 Petunia axillaris HOM05D000253 ORTHO05D000149 1.4e-07 58.5 33 69.7
Potri.003G101800 Populus trichocarpa HOM05D000253 ORTHO05D000149 1.4e-07 58.5 36 63.9
Atru.chr6.2774 Acer truncatum HOM05D000253 ORTHO05D000149 1.8e-07 58.2 33 72.7
Cfa021363 Carpinus fangiana HOM05D000253 ORTHO05D000149 1.8e-07 58.2 31 77.4
Manes.10G077100 Manihot esculenta HOM05D000253 ORTHO05D000149 1.8e-07 58.2 32 68.8
Os01g0710700 Oryza sativa ssp. japonica HOM05D000253 ORTHO05D000149 1.8e-07 58.2 31 77.4
Peaxi162Scf00469g00419 Petunia axillaris HOM05D000253 ORTHO05D000149 1.8e-07 58.2 33 72.7
Prupe.3G116300 Prunus persica HOM05D000253 ORTHO05D000149 1.8e-07 58.2 39 61.5
Actinidia10950 Actinidia chinensis HOM05D000253 ORTHO05D000149 2.4e-07 57.8 34 73.5
Nitab4.5_0000537g0160 Nicotiana tabacum HOM05D000253 ORTHO05D000149 2.4e-07 57.8 33 69.7
SalBow7G3553 Salvia bowleyana HOM05D000253 ORTHO05D000149 2.4e-07 57.8 32 71.9
Solyc07g055160.4 Solanum lycopersicum HOM05D000253 ORTHO05D000149 2.4e-07 57.8 33 69.7
Sopen07g027060 Solanum pennellii HOM05D000253 ORTHO05D000149 2.4e-07 57.8 33 69.7
PGSC0003DMG400020417 Solanum tuberosum HOM05D000253 ORTHO05D000149 2.4e-07 57.8 33 69.7
Thecc.01G152400 Theobroma cacao HOM05D000253 ORTHO05D000149 2.4e-07 57.8 39 59.0
Ciclev10015386m.g Citrus clementina HOM05D000253 ORTHO05D000149 3.1e-07 57.4 38 60.5
SalBow7G4081 Salvia bowleyana HOM05D000253 ORTHO05D000149 3.1e-07 57.4 33 69.7
Eucgr.A01923 Eucalyptus grandis HOM05D000253 ORTHO05D000149 4.0e-07 57.0 33 69.7
Glyma.12G129200 Glycine max HOM05D000253 ORTHO05D000149 4.0e-07 57.0 38 65.8
Nitab4.5_0000249g0200 Nicotiana tabacum HOM05D000253 ORTHO05D000149 4.0e-07 57.0 33 69.7
Nitab4.5_0004409g0050 Nicotiana tabacum HOM05D000253 ORTHO05D000149 4.0e-07 57.0 33 69.7
Nitab4.5_0013227g0020 Nicotiana tabacum HOM05D000253 ORTHO05D000149 4.0e-07 57.0 33 69.7
PSO170G4111 Papaver somniferum HOM05D000253 ORTHO05D000149 4.0e-07 57.0 30 73.3
Sopen12g006270 Solanum pennellii HOM05D000253 ORTHO05D000149 4.0e-07 57.0 33 69.7
PGSC0003DMG400007805 Solanum tuberosum HOM05D000253 ORTHO05D000149 4.0e-07 57.0 33 69.7
Dinv19783 Davidia involucrata HOM05D000253 ORTHO05D000149 5.3e-07 56.6 33 66.7
unitig_37.g12866 Utricularia gibba HOM05D000253 ORTHO05D000149 5.3e-07 56.6 40 60.0
VMungo1127G0895 Vigna mungo HOM05D000253 ORTHO05D000149 5.3e-07 56.6 33 72.7
CANSAT64G2978 Cannabis sativa HOM05D000253 ORTHO05D000149 6.9e-07 56.2 33 63.6
Cc04_g05670 Coffea canephora HOM05D000253 ORTHO05D000149 6.9e-07 56.2 33 72.7
Gohir.A10G154300 Gossypium hirsutum HOM05D000253 ORTHO05D000149 6.9e-07 56.2 33 66.7
HanXRQChr03g0078501 Helianthus annuus HOM05D000253 ORTHO05D000149 6.9e-07 56.2 37 59.5
EL10Ac9g20959 Beta vulgaris HOM05D000253 ORTHO05D000149 9.0e-07 55.8 32 71.9
EL10Ac9g20961 Beta vulgaris HOM05D000253 ORTHO05D000149 9.0e-07 55.8 32 71.9
ECA240G0761 Erigeron canadensis HOM05D000253 ORTHO05D000149 9.0e-07 55.8 37 59.5
Gorai.011G123300 Gossypium raimondii HOM05D000253 ORTHO05D000149 9.0e-07 55.8 33 66.7
HanXRQChr04g0095491 Helianthus annuus HOM05D000253 ORTHO05D000149 9.0e-07 55.8 35 60.0
CARHR057610 Cardamine hirsuta HOM05D000253 ORTHO05D000149 1.2e-06 55.5 31 74.2
AUR62029594 Chenopodium quinoa HOM05D000253 ORTHO05D000149 1.2e-06 55.5 32 68.8
Hma1.2p1_0178F.1_g078720 Hydrangea macrophylla HOM05D000253 ORTHO05D000149 1.2e-06 55.5 34 67.6
Phvul.011G128500 Phaseolus vulgaris HOM05D000253 ORTHO05D000149 1.2e-06 55.5 33 69.7
GSVIVG01020725001 Vitis vinifera HOM05D000253 ORTHO05D000149 1.2e-06 55.5 39 56.4
A04p32350 Brassica napus HOM05D000253 ORTHO05D000149 1.5e-06 55.1 30 76.7
C04p69860 Brassica napus HOM05D000253 ORTHO05D000149 1.5e-06 55.1 30 76.7
BraA04t18688Z Brassica rapa HOM05D000253 ORTHO05D000149 1.5e-06 55.1 30 76.7
MD00G1191600 Malus domestica HOM05D000253 ORTHO05D000149 2.0e-06 54.7 30 73.3
Manes.07G071300 Manihot esculenta HOM05D000253 ORTHO05D000149 2.0e-06 54.7 33 63.6
PSO782G4536 Papaver somniferum HOM05D000253 ORTHO05D000149 2.0e-06 54.7 30 73.3
PGR042G1602 Punica granatum HOM05D000253 ORTHO05D000149 2.0e-06 54.7 32 68.8
AL4G41240 Arabidopsis lyrata HOM05D000253 ORTHO05D000149 2.6e-06 54.3 31 71.0
BcaB06g29260 Brassica carinata HOM05D000253 ORTHO05D000149 2.6e-06 54.3 30 73.3
Carub.0004s2513 Capsella rubella HOM05D000253 ORTHO05D000149 2.6e-06 54.3 31 71.0
Rhsim06G0130400 Rhododendron simsii HOM05D000253 ORTHO05D000149 2.6e-06 54.3 34 67.6
Thecc.01G152500 Theobroma cacao HOM05D000253 ORTHO05D000149 2.6e-06 54.3 35 57.1
Sp4g24830 Schrenkiella parvula HOM05D000253 ORTHO05D000149 3.4e-06 53.9 30 73.3
Solyc12g010910.2 Solanum lycopersicum HOM05D000253 ORTHO05D000149 3.4e-06 53.9 33 66.7
AT2G42690 Arabidopsis thaliana HOM05D000253 ORTHO05D000149 4.5e-06 53.5 31 67.7
CANSAT64G2579 Cannabis sativa HOM05D000253 ORTHO05D000149 4.5e-06 53.5 32 68.8
Gohir.D10G111700 Gossypium hirsutum HOM05D000253 ORTHO05D000149 4.5e-06 53.5 33 63.6
HanXRQChr04g0095501 Helianthus annuus HOM05D000253 ORTHO05D000149 4.5e-06 53.5 30 70.0
Lsat_1_v5_gn_9_97161 Lactuca sativa HOM05D000253 ORTHO05D000149 4.5e-06 53.5 37 56.8
MD17G1265700 Malus domestica HOM05D000253 ORTHO05D000149 5.8e-06 53.1 34 61.8
EL10Ac9g20958 Beta vulgaris HOM05D000253 ORTHO05D000149 7.6e-06 52.8 32 65.6
PSO782G2323 Papaver somniferum HOM05D000253 ORTHO05D000149 7.6e-06 52.8 33 60.6
AUR62024066 Chenopodium quinoa HOM05D000253 ORTHO05D000149 1.0e-05 52.4 32 65.6
AUR62029592 Chenopodium quinoa HOM05D000253 ORTHO05D000149 1.0e-05 52.4 32 65.6
AUR62041738 Chenopodium quinoa HOM05D000253 ORTHO05D000149 1.0e-05 52.4 32 65.6
AUR62041739 Chenopodium quinoa HOM05D000253 ORTHO05D000149 1.0e-05 52.4 32 65.6
Medtr4g080100 Medicago truncatula HOM05D000253 ORTHO05D000149 1.0e-05 52.4 33 63.6
PSO339G4275 Papaver somniferum HOM05D000253 ORTHO05D000149 1.0e-05 52.4 30 66.7
PSO801G0811 Papaver somniferum HOM05D000253 ORTHO05D000149 1.0e-05 52.4 30 66.7


User provided reference genes

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