Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g04367 Nelumbo nucifera HOM05D003654 ORTHO05D004176 6.6e-44 180.3 88 100.0
Nn2g15259 Nelumbo nucifera HOM05D003654 ORTHO05D004176 8.4e-39 163.3 88 89.8
Nn7g36270 Nelumbo nucifera HOM05D003654 ORTHO05D004176 4.5e-24 114.4 89 68.5
TAR633G1637 Trochodendron aralioides HOM05D003654 ORTHO05D004176 1.2e-13 79.7 88 53.4
Rhsim07G0057900 Rhododendron simsii HOM05D003654 ORTHO05D004176 2.5e-11 72.0 95 51.6
Ciclev10033218m.g Citrus clementina HOM05D003654 ORTHO05D004176 4.3e-11 71.2 91 50.5
Hma1.2p1_2266F.1_g318440 Hydrangea macrophylla HOM05D003654 ORTHO05D004176 5.7e-11 70.9 93 50.5
Hma1.2p1_2266F.1_g318450 Hydrangea macrophylla HOM05D003654 ORTHO05D004176 5.7e-11 70.9 91 49.5
Lsat_1_v5_gn_4_31200 Lactuca sativa HOM05D003654 ORTHO05D004176 1.3e-10 69.7 67 55.2
ECA234G3018 Erigeron canadensis HOM05D007122 ORTHO05D008918 2.2e-10 68.9 68 57.4
Manes.10G139300 Manihot esculenta HOM05D003654 ORTHO05D004176 2.8e-10 68.6 43 69.8
Thecc.05G154000 Theobroma cacao HOM05D003654 ORTHO05D004176 2.8e-10 68.6 89 43.8
Thhalv10006420m.g Eutrema salsugineum HOM05D003654 ORTHO05D004176 6.3e-10 67.4 96 47.9
THA.LOC109117091 Tarenaya hassleriana HOM05D003654 ORTHO05D004176 6.3e-10 67.4 96 44.8
Nitab4.5_0006340g0020 Nicotiana tabacum HOM05D003654 ORTHO05D004176 8.2e-10 67.0 43 67.4
Sc10g0000210 Simmondsia chinensis HOM05D003654 ORTHO05D004176 1.1e-09 66.6 95 48.4
Atru.chr1.1086 Acer truncatum HOM05D003654 ORTHO05D004176 1.8e-09 65.9 93 46.2
ClCG09G003960 Citrullus lanatus HOM05D003654 ORTHO05D004176 1.8e-09 65.9 60 56.7
Oeu014591.1 Olea europaea HOM05D003654 ORTHO05D004176 1.8e-09 65.9 89 46.1
CsaV3_7G030860 Cucumis sativus L. HOM05D003654 ORTHO05D004176 5.3e-09 64.3 93 44.1
Nitab4.5_0006340g0010 Nicotiana tabacum HOM05D003654 ORTHO05D004176 5.3e-09 64.3 89 40.4
Potri.001G263404 Populus trichocarpa HOM05D003654 ORTHO05D004176 5.3e-09 64.3 37 75.7
Sabra16G0161800 Salix brachista HOM05D003654 ORTHO05D004176 5.3e-09 64.3 37 75.7
Ciclev10006321m.g Citrus clementina HOM05D003654 ORTHO05D004176 6.9e-09 63.9 35 80.0
Peaxi162Scf00071g01140 Petunia axillaris HOM05D003654 ORTHO05D004176 6.9e-09 63.9 68 50.0
Lsat_1_v5_gn_9_28921 Lactuca sativa HOM05D003654 ORTHO05D004176 9.1e-09 63.5 46 63.0
Lsat_1_v5_gn_9_28941 Lactuca sativa HOM05D003654 ORTHO05D004176 9.1e-09 63.5 46 63.0
Lsat_1_v5_gn_9_28901 Lactuca sativa HOM05D003654 ORTHO05D004176 1.2e-08 63.2 46 60.9
QL07p000287 Quercus lobata HOM05D003654 ORTHO05D004176 1.2e-08 63.2 93 39.8
Gohir.A09G122400 Gossypium hirsutum HOM05D003654 ORTHO05D004176 1.5e-08 62.8 49 59.2
Gohir.D09G118500 Gossypium hirsutum HOM05D003654 ORTHO05D004176 1.5e-08 62.8 49 59.2
Nn2g15256 Nelumbo nucifera HOM05D003654 ORTHO05D004176 1.5e-08 62.8 53 56.6
DCAR_020491 Daucus carota HOM05D003654 ORTHO05D004176 2.0e-08 62.4 83 42.2
Gohir.D08G164000 Gossypium hirsutum HOM05D003654 ORTHO05D004176 2.0e-08 62.4 89 42.7
Nitab4.5_0000707g0220 Nicotiana tabacum HOM05D003654 ORTHO05D004176 2.0e-08 62.4 43 60.5
Atru.chr1.1088 Acer truncatum HOM05D003654 ORTHO05D004176 2.6e-08 62.0 75 49.3
BcaC07g40377 Brassica carinata HOM05D003654 ORTHO05D004176 2.6e-08 62.0 94 45.7
Carub.0005s2429 Capsella rubella HOM05D003654 ORTHO05D004176 2.6e-08 62.0 101 43.6
ClCG10G017020 Citrullus lanatus HOM05D003654 ORTHO05D004176 2.6e-08 62.0 45 60.0
Cc06_g17070 Coffea canephora HOM05D003654 ORTHO05D004176 2.6e-08 62.0 84 46.4
MELO3C009681.2 Cucumis melo HOM05D003654 ORTHO05D004176 2.6e-08 62.0 43 65.1
Gorai.006G136800 Gossypium raimondii HOM05D003654 ORTHO05D004176 2.6e-08 62.0 49 59.2
Hma1.2p1_2266F.1_g318430 Hydrangea macrophylla HOM05D003654 ORTHO05D004176 2.6e-08 62.0 103 45.6
CARHR167650 Cardamine hirsuta HOM05D003654 ORTHO05D004176 3.4e-08 61.6 95 43.2
Sopen01g034550 Solanum pennellii HOM05D003654 ORTHO05D004176 3.4e-08 61.6 69 50.7
Eucgr.H02820 Eucalyptus grandis HOM05D003654 ORTHO05D004176 4.5e-08 61.2 43 67.4
Gorai.004G171000 Gossypium raimondii HOM05D003654 ORTHO05D004176 4.5e-08 61.2 89 41.6
Lsat_1_v5_gn_9_28881 Lactuca sativa HOM05D003654 ORTHO05D004176 4.5e-08 61.2 46 58.7
ECA248G2069 Erigeron canadensis HOM05D003654 ORTHO05D004176 7.7e-08 60.5 81 42.0
HanXRQChr03g0062221 Helianthus annuus HOM05D003654 ORTHO05D004176 7.7e-08 60.5 35 74.3
Potri.009G058500 Populus trichocarpa HOM05D003654 ORTHO05D004176 7.7e-08 60.5 41 63.4
Sabra16G0058500 Salix brachista HOM05D003654 ORTHO05D004176 7.7e-08 60.5 90 44.4
BcaC02g09939 Brassica carinata HOM05D003654 ORTHO05D004176 1.0e-07 60.1 103 45.6
C04p34970 Brassica napus HOM05D003654 ORTHO05D004176 1.0e-07 60.1 103 45.6
BolC4t25052H Brassica oleracea HOM05D003654 ORTHO05D004176 1.0e-07 60.1 103 45.6
Potri.016G055901 Populus trichocarpa HOM05D003654 ORTHO05D004176 1.0e-07 60.1 90 44.4
Sabra06G0035500 Salix brachista HOM05D000131 ORTHO05D004176 1.0e-07 60.1 78 47.4
Solyc04g015700.1 Solanum lycopersicum HOM05D003654 ORTHO05D004176 1.0e-07 60.1 35 74.3
Sopen04g007780 Solanum pennellii HOM05D003654 ORTHO05D004176 1.0e-07 60.1 35 74.3
Atru.chr1.1087 Acer truncatum HOM05D003654 ORTHO05D004176 1.3e-07 59.7 86 43.0
Atru.chr11.2594 Acer truncatum HOM05D003654 ORTHO05D004176 1.7e-07 59.3 40 70.0
PGSC0003DMG400027273 Solanum tuberosum HOM05D003654 ORTHO05D004176 1.7e-07 59.3 35 71.4
DCAR_022378 Daucus carota HOM05D003654 ORTHO05D004176 2.2e-07 58.9 88 42.0
Zm00001eb301890 Zea mays HOM05D003654 ORTHO05D004176 2.2e-07 58.9 34 73.5
Actinidia19408 Actinidia chinensis HOM05D003654 ORTHO05D004176 2.9e-07 58.5 74 48.6
CsaV3_3G039380 Cucumis sativus L. HOM05D003654 ORTHO05D004176 2.9e-07 58.5 37 67.6
Gohir.D09G118550 Gossypium hirsutum HOM05D003654 ORTHO05D004176 2.9e-07 58.5 37 70.3
Gorai.006G136900 Gossypium raimondii HOM05D003654 ORTHO05D004176 2.9e-07 58.5 37 70.3
MBI17_g18370_MAGBIO Magnolia biondii HOM05D003654 ORTHO05D004176 2.9e-07 58.5 39 66.7
Sed0005344 Sechium edule HOM05D003654 ORTHO05D004176 2.9e-07 58.5 47 57.4
Ah.10g038700 Amaranthus hybridus HOM05D003654 ORTHO05D004176 3.8e-07 58.2 69 47.8
Haze_19862 Corylus avellana HOM05D003654 ORTHO05D004176 3.8e-07 58.2 64 50.0
Lj3g0024349 Lotus japonicus HOM05D003654 ORTHO05D004176 3.8e-07 58.2 86 41.9
Solyc01g087580.3 Solanum lycopersicum HOM05D003654 ORTHO05D004176 3.8e-07 58.2 34 73.5
ATR0626G210 Amborella trichopoda HOM05D003654 ORTHO05D004176 5.0e-07 57.8 35 71.4
HanXRQChr03g0062211 Helianthus annuus HOM05D003654 ORTHO05D004176 5.0e-07 57.8 43 62.8
Hma1.2p1_0226F.1_g095570 Hydrangea macrophylla HOM05D003654 ORTHO05D004176 5.0e-07 57.8 59 52.5
MBI17_g05505_MAGBIO Magnolia biondii HOM05D003654 ORTHO05D004176 5.0e-07 57.8 61 49.2
MBI17_g39959_MAGBIO Magnolia biondii HOM05D003654 ORTHO05D004176 5.0e-07 57.8 61 49.2
MBI17_g45827_MAGBIO Magnolia biondii HOM05D003654 ORTHO05D004176 5.0e-07 57.8 35 71.4
SEGI_17870 Sequoiadendron giganteum HOM05D003654 ORTHO05D004176 5.0e-07 57.8 86 41.9
PGSC0003DMG400006789 Solanum tuberosum HOM05D003654 ORTHO05D004176 5.0e-07 57.8 69 49.3
PGSC0003DMG400006790 Solanum tuberosum HOM05D003654 ORTHO05D004176 5.0e-07 57.8 93 43.0
Lj9P638T60 Lonicera japonica HOM05D003654 ORTHO05D004176 6.5e-07 57.4 33 75.8
Aqoxy7G00793 Aquilegia oxysepala HOM05D003654 ORTHO05D004176 8.5e-07 57.0 89 43.8
CDE03G0266 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 8.5e-07 57.0 89 42.7
Ca_08602_v3 Cicer arietinum L. HOM05D003654 ORTHO05D004176 8.5e-07 57.0 87 42.5
AUR62023084 Chenopodium quinoa HOM05D003654 ORTHO05D004176 1.1e-06 56.6 62 53.2
Solyc01g087570.2 Solanum lycopersicum HOM05D003654 ORTHO05D004176 1.1e-06 56.6 45 55.6
Sopen01g034540 Solanum pennellii HOM05D003654 ORTHO05D004176 1.1e-06 56.6 45 55.6
SGA_v2.0_scaffold119G32750 Striga asiatica HOM05D003654 ORTHO05D004176 1.1e-06 56.6 33 72.7
BcaC07g40378 Brassica carinata HOM05D003654 ORTHO05D004176 1.4e-06 56.2 97 41.2
BcaC07g40382 Brassica carinata HOM05D003654 ORTHO05D004176 1.4e-06 56.2 97 42.3
C08p32930 Brassica napus HOM05D003654 ORTHO05D004176 1.4e-06 56.2 97 42.3
PGSC0003DMG400006788 Solanum tuberosum HOM05D003654 ORTHO05D004176 1.4e-06 56.2 34 67.6
Aqoxy7G00792 Aquilegia oxysepala HOM05D003654 ORTHO05D004176 1.9e-06 55.8 87 40.2
EL10Ac2g04348 Beta vulgaris HOM05D003654 ORTHO05D004176 1.9e-06 55.8 32 75.0
BolC8t50897H Brassica oleracea HOM05D003654 ORTHO05D004176 1.9e-06 55.8 97 41.2
CDE11G0735 Ceratophyllum demersum HOM05D003654 ORTHO05D004176 1.9e-06 55.8 89 43.8
Lsat_1_v5_gn_1_105600 Lactuca sativa HOM05D003654 ORTHO05D004176 2.5e-06 55.5 58 48.3
CSS0025582 Camellia sinensis var. sinensis HOM05D003654 ORTHO05D004176 3.2e-06 55.1 90 41.1
CANSAT80G0428 Cannabis sativa HOM05D003654 ORTHO05D004176 4.2e-06 54.7 38 63.2
CiPaw.09G037900 Carya illinoinensis HOM05D003654 ORTHO05D004176 4.2e-06 54.7 87 41.4
Glyma.05G150100 Glycine max HOM05D003654 ORTHO05D004176 4.2e-06 54.7 87 40.2
Gohir.D11G328950 Gossypium hirsutum HOM05D003654 ORTHO05D004176 4.2e-06 54.7 69 44.9
Gorai.007G360300 Gossypium raimondii HOM05D003654 ORTHO05D004176 4.2e-06 54.7 69 44.9
Sed0004161 Sechium edule HOM05D003654 ORTHO05D004176 4.2e-06 54.7 59 50.8
ATR0626G251 Amborella trichopoda HOM05D003654 ORTHO05D004176 5.5e-06 54.3 65 47.7
Gohir.A08G143100 Gossypium hirsutum HOM05D003654 ORTHO05D004176 5.5e-06 54.3 32 71.9
Gohir.A11G312450 Gossypium hirsutum HOM05D003654 ORTHO05D004176 5.5e-06 54.3 67 43.3
Nn5g30179 Nelumbo nucifera HOM05D003654 ORTHO05D004176 5.5e-06 54.3 33 72.7
BraA09t40486Z Brassica rapa HOM05D003654 ORTHO05D004176 7.2e-06 53.9 102 39.2
Peaxi162Scf00493g00002 Petunia axillaris HOM05D003654 ORTHO05D004176 7.2e-06 53.9 34 70.6
Phvul.003G066700 Phaseolus vulgaris HOM05D003654 ORTHO05D004176 7.2e-06 53.9 56 53.6
QL04p008848 Quercus lobata HOM05D003654 ORTHO05D004176 7.2e-06 53.9 91 45.1
Aqoxy7G00798 Aquilegia oxysepala HOM05D003654 ORTHO05D004176 9.4e-06 53.5 37 64.9


User provided reference genes

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