Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g04330 Nelumbo nucifera HOM05D006105 ORTHO05D006345 1.0e-121 440.3 253 100.0
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 4.0e-65 252.3 254 63.0
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 1.2e-34 151.0 273 44.7
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 8.6e-28 128.3 253 41.9
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 1.1e-27 127.9 269 41.6
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 1.5e-27 127.5 252 44.8
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 4.3e-27 125.9 262 42.7
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 4.3e-27 125.9 263 41.8
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 2.1e-26 123.6 230 43.0
CiPaw.12G115300 Carya illinoinensis HOM05D006105 ORTHO05D006345 6.2e-26 122.1 241 44.0
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 3.1e-25 119.8 280 40.4
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 4.0e-25 119.4 275 40.4
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 1.5e-24 117.5 265 42.6
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 3.4e-24 116.3 234 43.6
TAR627G0886 Trochodendron aralioides HOM05D000157 ORTHO05D006345 5.8e-24 115.5 242 41.3
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 7.5e-24 115.2 242 40.5
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 3.7e-23 112.8 267 42.7
FAN21G1974 Fragaria x ananassa HOM05D006105 ORTHO05D006345 8.3e-23 111.7 280 38.6
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 1.1e-22 111.3 255 41.2
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 2.4e-22 110.2 261 39.8
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 5.4e-22 109.0 265 43.0
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 7.1e-22 108.6 248 38.3
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 2.1e-21 107.1 263 38.8
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 2.7e-21 106.7 248 40.3
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 2.7e-21 106.7 266 39.8
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 2.7e-21 106.7 265 38.5
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 3.5e-21 106.3 262 38.9
RcHm_v2.0_Chr5g0031561 Rosa chinensis HOM05D006105 ORTHO05D006345 6.0e-21 105.5 265 36.2
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 1.3e-20 104.4 265 43.0
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 1.7e-20 104.0 263 38.0
CsaV3_4G033280 Cucumis sativus L. HOM05D006105 ORTHO05D006345 1.1e-19 101.3 273 39.2
Sabra16G0247400 Salix brachista HOM05D006105 ORTHO05D006345 1.5e-19 100.9 294 37.8
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 3.3e-19 99.8 282 36.5
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 3.3e-19 99.8 263 37.6
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 3.3e-19 99.8 245 38.4
Atru.chr2.2260 Acer truncatum HOM05D006105 ORTHO05D006345 5.6e-19 99.0 244 35.2
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 5.6e-19 99.0 284 35.9
ClCG11G017660 Citrullus lanatus HOM05D006105 ORTHO05D006345 1.2e-18 97.8 277 44.0
FvH4_3g18750 Fragaria vesca HOM05D006105 ORTHO05D006345 1.2e-18 97.8 284 36.3
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 1.6e-18 97.4 279 37.3
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 2.1e-18 97.1 275 38.5
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 2.1e-18 97.1 268 37.7
VMungo1080G1877 Vigna mungo HOM05D006105 ORTHO05D006345 2.1e-18 97.1 259 39.8
Eucgr.F01202 Eucalyptus grandis HOM05D006105 ORTHO05D006345 2.8e-18 96.7 268 33.6
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 3.6e-18 96.3 234 38.5
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 3.6e-18 96.3 255 37.6
MELO3C025628.2 Cucumis melo HOM05D006105 ORTHO05D006345 6.2e-18 95.5 273 38.1
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 6.2e-18 95.5 239 41.0
Gohir.A01G059000 Gossypium hirsutum HOM05D006105 ORTHO05D006345 8.1e-18 95.1 238 37.8
FAN16G1829 Fragaria x ananassa HOM05D006105 ORTHO05D006345 1.4e-17 94.4 290 34.8
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 4.0e-17 92.8 269 36.4
MD11G1258600 Malus domestica HOM05D006105 ORTHO05D006345 1.5e-16 90.9 299 33.1
Rhsim06G0204700 Rhododendron simsii HOM05D006105 ORTHO05D006345 1.5e-16 90.9 271 36.2
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 2.0e-16 90.5 228 38.2
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 3.4e-16 89.7 238 37.4
Phvul.005G068000 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 3.4e-16 89.7 260 40.0
Gohir.D01G045100 Gossypium hirsutum HOM05D006105 ORTHO05D006345 4.4e-16 89.4 263 35.0
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 7.6e-16 88.6 242 35.1
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 1.3e-15 87.8 265 36.6
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 1.7e-15 87.4 244 35.2
FAN11G0448 Fragaria x ananassa HOM05D006105 ORTHO05D006345 4.9e-15 85.9 285 34.4
Glyma.12G228100 Glycine max HOM05D006105 ORTHO05D006345 4.9e-15 85.9 238 35.7
TPR.G9213 Trifolium pratense HOM05D006105 ORTHO05D006345 4.9e-15 85.9 257 38.9
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 4.9e-15 85.9 218 37.6
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.9e-14 84.0 242 37.2
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 1.9e-14 84.0 251 38.6
MSTRG.14950 Avicennia marina HOM05D006105 ORTHO05D006345 4.1e-14 82.8 268 32.5
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 7.1e-14 82.0 239 38.9
MSTRG.14216 Avicennia marina HOM05D006105 ORTHO05D006345 7.1e-14 82.0 244 33.6
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 9.2e-14 81.6 284 33.5
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 2.7e-13 80.1 232 34.5
CsaV3_4G008420 Cucumis sativus L. HOM05D006105 ORTHO05D006345 6.0e-13 79.0 237 36.3
ECA234G3938 Erigeron canadensis HOM05D006105 ORTHO05D006345 6.6e-12 75.5 243 35.0
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 1.5e-11 74.3 246 37.8
MELO3C016090.2 Cucumis melo HOM05D006105 ORTHO05D006345 1.9e-11 73.9 236 36.0
Psat5g240600 Pisum sativum HOM05D006105 ORTHO05D006345 1.9e-11 73.9 262 38.5
Lalb_Chr25g0286021 Lupinus albus HOM05D006105 ORTHO05D006345 3.3e-11 73.2 233 34.3
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 7.3e-11 72.0 96 52.1
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 9.6e-11 71.6 234 34.6
Sed0015488 Sechium edule HOM05D006105 ORTHO05D006345 9.6e-11 71.6 252 34.1
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.2e-10 71.2 253 34.0
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 2.1e-10 70.5 236 34.7
Glyma.13G271900 Glycine max HOM05D006105 ORTHO05D006345 2.1e-10 70.5 245 32.7
HanXRQChr10g0304731 Helianthus annuus HOM05D006105 ORTHO05D006345 3.6e-10 69.7 256 32.8
Solyc07g062685.2 Solanum lycopersicum HOM05D006105 ORTHO05D006345 3.6e-10 69.7 253 32.0
Sopen07g030920 Solanum pennellii HOM05D006105 ORTHO05D006345 4.7e-10 69.3 247 32.8
Lj3g0024128 Lotus japonicus HOM05D006105 ORTHO05D006345 1.1e-09 68.2 268 29.9
Medtr2g078220 Medicago truncatula HOM05D006105 ORTHO05D006345 2.4e-09 67.0 262 37.4
Solyc12g014120.3 Solanum lycopersicum HOM05D006105 ORTHO05D006345 3.1e-09 66.6 99 45.5
ClCG07G009910 Citrullus lanatus HOM05D006105 ORTHO05D006345 4.0e-09 66.2 219 35.6
Sed0026435 Sechium edule HOM05D006105 ORTHO05D006345 1.5e-08 64.3 253 34.4
DCAR_021012 Daucus carota HOM05D006105 ORTHO05D006345 2.6e-08 63.5 247 31.6
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 3.4e-08 63.2 259 32.8
Gohir.A13G148200 Gossypium hirsutum HOM05D006105 ORTHO05D006345 4.4e-08 62.8 247 33.6
MBI06_g40465_MAGBIO Magnolia biondii HOM05D026394 ORTHO05D030051 7.6e-08 62.0 70 64.3
MBI06_g46086_MAGBIO Magnolia biondii HOM05D026394 ORTHO05D030051 7.6e-08 62.0 70 64.3
Glyma.06G232600 Glycine max HOM05D006105 ORTHO05D006345 9.9e-08 61.6 245 29.4
Aqoxy4G00493 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 1.3e-07 61.2 267 28.8
DCAR_013141 Daucus carota HOM05D006105 ORTHO05D006345 1.7e-07 60.8 272 32.4
MBI06_g25724_MAGBIO Magnolia biondii HOM05D026394 ORTHO05D030051 1.7e-07 60.8 82 58.5
Ca_04016_v3 Cicer arietinum L. HOM05D006105 ORTHO05D006345 3.8e-07 59.7 262 39.3
Migut.M00751 Erythranthe guttata HOM05D006105 ORTHO05D006345 4.9e-07 59.3 237 31.2
Peaxi162Scf00069g01930 Petunia axillaris HOM05D006105 ORTHO05D006345 4.9e-07 59.3 239 32.6
Manes.16G035200 Manihot esculenta HOM05D013066 ORTHO05D006345 1.9e-06 57.4 244 29.5
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.9e-06 57.4 247 31.2
PGSC0003DMG400021273 Solanum tuberosum HOM05D006105 ORTHO05D006345 1.9e-06 57.4 228 30.7
SEGI_16969 Sequoiadendron giganteum HOM05D016559 ORTHO05D019650 2.4e-06 57.0 58 62.1
HanXRQChr12g0372831 Helianthus annuus HOM05D006105 ORTHO05D006345 3.2e-06 56.6 61 59.0
SGA_v2.0_scaffold34G13768 Striga asiatica HOM05D006105 ORTHO05D006345 7.1e-06 55.5 94 43.6


User provided reference genes

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