Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g04268 Nelumbo nucifera HOM05D007603 ORTHO05D009604 1.2e-109 400.2 262 100.0
TAR626G1090 Trochodendron aralioides HOM05D001501 ORTHO05D001329 3.2e-41 172.9 208 65.4
Dinv06842 Davidia involucrata HOM05D007603 ORTHO05D009604 2.4e-33 146.7 246 54.1
Hma1.2p1_0002F.1_g002370 Hydrangea macrophylla HOM05D007603 ORTHO05D009604 5.2e-28 129.0 250 47.6
Dinv39835 Davidia involucrata HOM05D007603 ORTHO05D009604 9.9e-27 124.8 248 51.2
Solyc07g150145.1 Solanum lycopersicum HOM05D007603 ORTHO05D009604 2.2e-26 123.6 253 45.5
Thecc.02G187900 Theobroma cacao HOM05D007603 ORTHO05D009604 2.9e-26 123.2 256 41.4
Nitab4.5_0002629g0010 Nicotiana tabacum HOM05D007603 ORTHO05D009604 1.1e-25 121.3 250 49.2
CSS0037684 Camellia sinensis var. sinensis HOM05D007603 ORTHO05D009604 1.4e-25 120.9 260 43.8
Ciclev10017455m.g Citrus clementina HOM05D007603 ORTHO05D009604 1.4e-25 120.9 250 44.0
TAR624G0387 Trochodendron aralioides HOM05D007603 ORTHO05D009604 4.1e-25 119.4 170 59.4
ClCG02G002280 Citrullus lanatus HOM05D007603 ORTHO05D009604 3.5e-24 116.3 253 40.7
Oeu016901.1 Olea europaea HOM05D007603 ORTHO05D009604 6.0e-24 115.5 262 39.7
PGSC0003DMG400009384 Solanum tuberosum HOM05D007603 ORTHO05D009604 7.8e-24 115.2 253 49.8
PSO541G0270 Papaver somniferum HOM05D007603 ORTHO05D009604 1.3e-23 114.4 247 39.7
MELO3C018861.2 Cucumis melo HOM05D007603 ORTHO05D009604 2.3e-23 113.6 255 39.2
Sed0002279 Sechium edule HOM05D007603 ORTHO05D009604 2.5e-22 110.2 257 40.5
Haze_13265 Corylus avellana HOM05D007603 ORTHO05D009604 4.3e-22 109.4 248 45.6
vmacro12353 Vaccinium macrocarpon HOM05D007603 ORTHO05D009604 5.6e-22 109.0 238 53.4
Actinidia10989 Actinidia chinensis HOM05D007603 ORTHO05D009604 1.6e-21 107.5 229 45.9
Manes.13G141000 Manihot esculenta HOM05D007603 ORTHO05D009604 4.7e-21 105.9 257 39.3
QL08p040785 Quercus lobata HOM05D007603 ORTHO05D009604 6.2e-21 105.5 254 46.9
Sabra13G0062200 Salix brachista HOM05D007603 ORTHO05D009604 1.4e-20 104.4 263 37.3
TWI14G0603 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 1.4e-20 104.4 247 54.7
Sed0026242 Sechium edule HOM05D007603 ORTHO05D009604 1.8e-20 104.0 244 37.3
Potri.013G072200 Populus trichocarpa HOM05D007603 ORTHO05D009604 2.4e-20 103.6 265 38.5
Sopen07g027470 Solanum pennellii HOM05D007603 ORTHO05D009604 6.8e-20 102.1 255 53.3
PSO675G7067 Papaver somniferum HOM05D007603 ORTHO05D009604 8.9e-20 101.7 250 40.8
TWI23G0636 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 8.9e-20 101.7 246 48.0
Oeu036085.1 Olea europaea HOM05D007603 ORTHO05D009604 1.2e-19 101.3 262 37.4
Aqoxy1G02256 Aquilegia oxysepala HOM05D007603 ORTHO05D009604 2.0e-19 100.5 253 45.1
Potri.013G120700 Populus trichocarpa HOM05D007603 ORTHO05D009604 2.6e-19 100.1 260 36.2
Atru.chr6.2855 Acer truncatum HOM05D007603 ORTHO05D009604 3.4e-19 99.8 249 37.8
Sabra13G0102000 Salix brachista HOM05D007603 ORTHO05D009604 7.6e-19 98.6 259 37.1
Actinidia11119 Actinidia chinensis HOM05D007603 ORTHO05D009604 1.9e-17 94.0 241 49.8
arahy.Tifrunner.gnm1.ann1.76DKB4 Arachis hypogaea HOM05D007603 ORTHO05D009604 7.1e-17 92.0 248 36.7
SalBow7G0820 Salvia bowleyana HOM05D007603 ORTHO05D009604 7.1e-17 92.0 249 36.9
CiPaw.03G182900 Carya illinoinensis HOM05D007603 ORTHO05D009604 1.2e-16 91.3 252 39.3
Aa31sc35G40 Aethionema arabicum HOM05D007603 ORTHO05D009604 3.5e-16 89.7 268 34.7
Nitab4.5_0006973g0020 Nicotiana tabacum HOM05D007603 ORTHO05D009604 4.6e-16 89.4 147 49.0
arahy.Tifrunner.gnm1.ann1.M59RYT Arachis hypogaea HOM05D007603 ORTHO05D009604 1.3e-15 87.8 248 35.9
DCAR_013048 Daucus carota HOM05D007603 ORTHO05D009604 5.1e-15 85.9 246 34.1
Prupe.3G128600 Prunus persica HOM05D007603 ORTHO05D009604 5.1e-15 85.9 257 39.7
PGR042G1843 Punica granatum HOM05D007603 ORTHO05D009604 6.6e-15 85.5 257 42.0
AUR62043430 Chenopodium quinoa HOM05D007603 ORTHO05D009604 8.7e-15 85.1 249 50.2
Cpa.g.sc50.10 Carica papaya HOM05D007603 ORTHO05D009604 4.3e-14 82.8 278 36.7
Lj3g0007744 Lotus japonicus HOM05D007603 ORTHO05D009604 4.3e-14 82.8 248 37.1
Gohir.D02G176900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 7.3e-14 82.0 252 37.3
Hund07856 Selenicereus undatus HOM05D007603 ORTHO05D009604 9.6e-14 81.6 105 54.3
Hund01003 Selenicereus undatus HOM05D007603 ORTHO05D009604 1.3e-13 81.3 261 37.5
Gohir.A03G153900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 1.6e-13 80.9 250 36.0
Cc05_g07840 Coffea canephora HOM05D007603 ORTHO05D009604 2.1e-13 80.5 205 35.6
MBI06_g00805_MAGBIO Magnolia biondii HOM05D007603 ORTHO05D009604 4.8e-13 79.3 148 47.3
Carub.0005s2128 Capsella rubella HOM05D007603 ORTHO05D009604 8.1e-13 78.6 238 34.0
AUR62036075 Chenopodium quinoa HOM05D007603 ORTHO05D009604 8.1e-13 78.6 138 44.9
CAN.G1543.2 Capsicum annuum HOM05D007603 ORTHO05D009604 1.4e-12 77.8 141 45.4
EL10Ac9g20838 Beta vulgaris HOM05D007603 ORTHO05D009604 9.0e-12 75.1 254 39.8
THA.LOC104825256 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 1.5e-11 74.3 257 38.1
HanXRQChr08g0231781 Helianthus annuus HOM05D007603 ORTHO05D009604 2.6e-11 73.6 243 38.3
Lsat_1_v5_gn_8_137160 Lactuca sativa HOM05D007603 ORTHO05D009604 9.9e-11 71.6 236 39.0
FAN02G2478 Fragaria x ananassa HOM05D007603 ORTHO05D009604 1.7e-10 70.9 251 35.9
MSTRG.14321 Avicennia marina HOM05D007603 ORTHO05D009604 2.2e-10 70.5 250 34.4
CsaV3_7G003160 Cucumis sativus L. HOM05D007603 ORTHO05D009604 2.9e-10 70.1 140 42.9
THA.LOC104823514 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 3.8e-10 69.7 261 31.8
CDE10G1214 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 6.4e-10 68.9 246 32.1
Glyma.12G207700 Glycine max HOM05D007603 ORTHO05D009604 8.4e-10 68.6 250 40.0
Thhalv10010720m.g Eutrema salsugineum HOM05D007603 ORTHO05D009604 1.9e-09 67.4 242 32.2
BcaB02g07727 Brassica carinata HOM05D007603 ORTHO05D009604 4.2e-09 66.2 252 32.1
VMungo1080G0021 Vigna mungo HOM05D007603 ORTHO05D009604 4.2e-09 66.2 240 39.2
Glyma.13G293400 Glycine max HOM05D007603 ORTHO05D009604 7.1e-09 65.5 250 41.6
Lalb_Chr14g0367241 Lupinus albus HOM05D007603 ORTHO05D009604 9.3e-09 65.1 141 40.4
Medtr2g090770 Medicago truncatula HOM05D007603 ORTHO05D009604 9.3e-09 65.1 239 33.5
CDE10G0532 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 2.7e-08 63.5 241 32.0
AL5G35760 Arabidopsis lyrata HOM05D007603 ORTHO05D009604 4.6e-08 62.8 254 34.6
AT3G54680 Arabidopsis thaliana HOM05D007603 ORTHO05D009604 1.3e-07 61.2 241 32.4
A09p47630 Brassica napus HOM05D007603 ORTHO05D009604 2.3e-07 60.5 221 43.9
TPR.G6485 Trifolium pratense HOM05D007603 ORTHO05D009604 2.3e-07 60.5 246 33.3
A07p22220 Brassica napus HOM05D007603 ORTHO05D009604 3.9e-07 59.7 249 31.7
BcaC08g44692 Brassica carinata HOM05D007603 ORTHO05D009604 5.1e-07 59.3 249 31.7
C06p22280 Brassica napus HOM05D007603 ORTHO05D009604 5.1e-07 59.3 249 31.7
BolC6t37414H Brassica oleracea HOM05D007603 ORTHO05D009604 5.1e-07 59.3 249 31.7
Phvul.005G099400 Phaseolus vulgaris HOM05D007603 ORTHO05D009604 6.6e-07 58.9 239 35.6
BraA07t29901Z Brassica rapa HOM05D007603 ORTHO05D009604 8.7e-07 58.5 251 31.1
Sp5g07770 Schrenkiella parvula HOM05D007603 ORTHO05D009604 1.9e-06 57.4 250 30.0
BolC8t50594H Brassica oleracea HOM05D007603 ORTHO05D009604 4.3e-06 56.2 216 47.7
Psat5g274200 Pisum sativum HOM05D007603 ORTHO05D009604 4.3e-06 56.2 235 31.9
FAN14G3046 Fragaria x ananassa HOM05D007603 ORTHO05D016291 5.6e-06 55.8 99 48.5
BcaC07g39795 Brassica carinata HOM05D007603 ORTHO05D009604 7.3e-06 55.5 221 42.1
C08p29830 Brassica napus HOM05D007603 ORTHO05D009604 7.3e-06 55.5 216 42.6
CARHR164600 Cardamine hirsuta HOM05D007603 ORTHO05D009604 9.6e-06 55.1 139 36.7


User provided reference genes

Program Settings