Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 4.6e-91 337.8 162 100.0
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.9e-74 281.6 142 95.1
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.4e-71 273.1 137 94.9
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 1.5e-65 253.1 139 84.2
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 7.4e-65 250.8 139 84.2
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 2.4e-63 245.7 138 83.3
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 6.9e-63 244.2 139 82.0
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 9.0e-63 243.8 137 81.0
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.2e-62 243.4 139 82.0
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 2.6e-62 242.3 140 81.4
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 3.4e-62 241.9 137 81.8
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 5.8e-62 241.1 138 83.3
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 7.6e-62 240.7 139 79.9
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.0e-61 240.4 136 81.6
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 1.3e-61 240.0 137 79.6
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 1.3e-61 240.0 139 82.0
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 1.3e-61 240.0 139 80.6
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.3e-61 240.0 139 80.6
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 1.3e-61 240.0 138 80.4
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.7e-61 239.6 135 83.0
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 1.7e-61 239.6 139 81.3
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 4.9e-61 238.0 138 79.0
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 6.5e-61 237.7 139 79.9
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 6.5e-61 237.7 136 78.7
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 6.5e-61 237.7 136 79.4
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 6.5e-61 237.7 136 79.4
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 6.5e-61 237.7 134 80.6
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 6.5e-61 237.7 135 82.2
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 6.5e-61 237.7 135 82.2
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 8.4e-61 237.3 139 80.6
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 1.1e-60 236.9 139 77.7
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 1.1e-60 236.9 139 78.4
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 1.9e-60 236.1 139 79.1
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 1.9e-60 236.1 139 78.4
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 2.5e-60 235.7 134 79.9
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 3.2e-60 235.3 139 78.4
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 4.2e-60 235.0 136 78.7
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 5.5e-60 234.6 138 77.5
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 5.5e-60 234.6 138 77.5
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 5.5e-60 234.6 138 77.5
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 9.3e-60 233.8 142 78.9
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 9.3e-60 233.8 138 77.5
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 1.2e-59 233.4 145 77.2
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 1.6e-59 233.0 139 77.7
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 1.6e-59 233.0 138 76.1
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 1.6e-59 233.0 138 74.6
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 1.6e-59 233.0 131 82.4
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 2.7e-59 232.3 138 79.7
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 3.5e-59 231.9 133 81.2
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 3.5e-59 231.9 139 77.7
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 4.6e-59 231.5 138 76.8
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 4.6e-59 231.5 131 83.2
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 6.0e-59 231.1 139 79.1
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 1.0e-58 230.3 138 74.6
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.3e-58 229.9 139 82.7
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 1.8e-58 229.6 131 81.7
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 1.8e-58 229.6 139 77.7
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 2.3e-58 229.2 139 77.0
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 3.0e-58 228.8 138 76.1
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 5.1e-58 228.0 132 78.0
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 1.1e-57 226.9 139 77.7
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 1.5e-57 226.5 133 75.9
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 1.9e-57 226.1 140 74.3
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 1.9e-57 226.1 134 78.4
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 2.5e-57 225.7 137 74.5
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 3.3e-57 225.3 138 73.2
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 3.3e-57 225.3 131 80.2
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 5.7e-57 224.6 133 77.4
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 7.4e-57 224.2 136 75.7
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 9.6e-57 223.8 133 77.4
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 1.3e-56 223.4 136 75.7
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 1.3e-56 223.4 133 75.9
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 1.6e-56 223.0 131 77.9
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 1.6e-56 223.0 135 77.8
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 2.1e-56 222.6 134 78.4
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 2.8e-56 222.2 134 75.4
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 3.7e-56 221.9 131 75.6
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 3.7e-56 221.9 135 76.3
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 6.3e-56 221.1 131 77.1
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 8.2e-56 220.7 137 75.2
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 8.2e-56 220.7 135 74.1
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 8.2e-56 220.7 133 75.2
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 8.2e-56 220.7 135 74.1
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 8.2e-56 220.7 131 77.1
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 1.1e-55 220.3 138 72.5
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 1.8e-55 219.5 133 74.4
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 1.8e-55 219.5 133 74.4
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 2.4e-55 219.2 134 73.9
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 4.1e-55 218.4 130 77.7
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 4.1e-55 218.4 134 76.9
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 5.3e-55 218.0 144 70.1
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 6.9e-55 217.6 137 74.5
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 6.9e-55 217.6 137 75.2
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 1.2e-54 216.9 139 74.8
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 2.6e-54 215.7 134 73.9
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 3.4e-54 215.3 134 76.1
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 2.5e-52 209.1 139 72.7
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 2.5e-52 209.1 137 71.5
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 5.1e-50 201.4 139 69.1
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 1.3e-48 196.8 128 67.2
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 2.4e-47 192.6 139 67.6
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 4.1e-47 191.8 133 64.7
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 1.9e-44 183.0 134 60.4
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 2.7e-43 179.1 131 60.3
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 4.1e-31 138.7 75 90.7
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 2.0e-25 119.8 80 67.5
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 1.0e-21 107.5 59 81.4
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 1.3e-21 107.1 64 76.6
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 1.6e-19 100.1 60 75.0
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 4.8e-16 88.6 61 67.2
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.5e-12 77.0 39 87.2
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 1.3e-08 63.9 61 47.5
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 7.7e-06 54.7 36 66.7


User provided reference genes

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