Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 6.0e-219 763.8 376 100.0
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 1.1e-175 620.2 368 81.2
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 5.9e-174 614.4 370 81.4
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 2.6e-169 599.0 367 76.8
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 3.7e-168 595.1 368 78.8
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 1.4e-167 593.2 368 78.8
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 4.1e-167 591.7 367 76.0
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 2.6e-166 589.0 367 77.7
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 6.1e-163 577.8 366 76.8
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 2.0e-161 572.8 368 75.5
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 5.7e-161 571.2 368 75.3
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 5.7e-161 571.2 366 75.7
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 5.7e-161 571.2 374 74.1
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 1.7e-160 569.7 366 74.3
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 2.8e-160 568.9 369 76.7
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 3.7e-160 568.5 371 73.9
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 6.3e-160 567.8 367 76.6
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 6.3e-160 567.8 367 75.7
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 1.8e-159 566.2 368 75.5
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 1.8e-159 566.2 366 75.7
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 3.1e-159 565.5 369 75.6
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 5.4e-159 564.7 367 76.8
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 7.0e-159 564.3 369 75.3
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 4.5e-158 561.6 373 75.6
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 1.0e-157 560.5 371 73.9
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 1.0e-157 560.5 374 73.8
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 1.0e-157 560.5 378 72.8
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 1.0e-157 560.5 377 75.6
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 1.7e-157 559.7 367 76.3
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 1.7e-157 559.7 369 72.6
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 1.7e-157 559.7 369 72.1
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.7e-157 559.7 379 73.1
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 2.2e-157 559.3 368 73.9
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 3.8e-157 558.5 367 75.2
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 3.8e-157 558.5 368 71.7
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 2.5e-156 555.8 361 75.1
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 3.2e-156 555.4 369 72.1
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 5.5e-156 554.7 361 76.5
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 2.1e-155 552.7 372 73.7
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 3.6e-155 552.0 370 72.4
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 4.7e-155 551.6 368 72.8
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 6.1e-155 551.2 370 74.3
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 8.0e-155 550.8 369 73.4
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 5.2e-154 548.1 368 74.2
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 1.2e-153 547.0 363 73.6
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 1.5e-153 546.6 368 74.5
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 1.5e-153 546.6 362 73.8
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 2.0e-153 546.2 399 70.4
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 2.6e-153 545.8 370 73.5
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 2.6e-153 545.8 360 76.4
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 4.4e-153 545.0 370 73.0
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 1.3e-152 543.5 383 71.3
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 1.3e-152 543.5 363 73.0
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 1.3e-152 543.5 370 73.2
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 1.7e-152 543.1 362 73.5
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 2.8e-152 542.3 370 72.4
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 1.1e-151 540.4 361 74.5
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 1.4e-151 540.0 372 71.5
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 1.8e-151 539.7 363 73.3
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 2.4e-151 539.3 360 75.0
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 3.1e-151 538.9 361 74.0
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 4.5e-150 535.0 379 69.7
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 1.0e-149 533.9 360 73.1
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 2.3e-149 532.7 361 74.2
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 1.6e-147 526.6 367 72.5
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 6.1e-147 524.6 365 71.8
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 1.0e-146 523.9 365 71.2
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 1.4e-146 523.5 372 69.4
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 4.0e-146 521.9 367 70.0
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 5.2e-146 521.5 344 74.7
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 6.8e-146 521.2 350 74.0
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 2.6e-145 519.2 371 70.9
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 9.8e-145 517.3 362 70.2
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 9.8e-145 517.3 370 69.2
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 1.7e-144 516.5 368 67.4
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 6.3e-144 514.6 368 69.6
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 6.3e-144 514.6 362 69.3
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 8.3e-144 514.2 376 69.7
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 5.4e-143 511.5 365 69.6
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 7.0e-143 511.1 367 68.9
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 1.6e-142 510.0 361 69.8
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 1.6e-142 510.0 370 68.6
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 2.3e-141 506.1 366 69.1
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 2.9e-141 505.8 378 66.1
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 3.9e-141 505.4 347 72.0
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 2.5e-140 502.7 365 68.2
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 2.5e-140 502.7 365 68.2
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 2.5e-140 502.7 365 68.2
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 4.3e-140 501.9 365 67.9
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 4.3e-140 501.9 365 67.9
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 8.0e-139 497.7 370 67.8
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 8.0e-139 497.7 382 65.4
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 1.8e-138 496.5 433 61.4
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 3.4e-137 492.3 361 66.2
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 8.3e-136 487.6 379 65.2
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 8.3e-136 487.6 367 68.4
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 2.3e-133 479.6 388 63.9
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 1.2e-129 467.2 369 65.3
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 3.7e-120 435.6 291 74.6
Cfa000416 Carpinus fangiana HOM05D006332 ORTHO05D008421 1.1e-119 434.1 269 77.7
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 6.6e-117 424.9 365 59.2
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 9.6e-116 421.0 367 58.9
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 6.8e-114 414.8 572 43.9
Nitab4.5_0009738g0010 Nicotiana tabacum HOM05D006332 ORTHO05D008421 8.9e-114 414.5 292 70.9
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 1.5e-113 413.7 388 58.2
Duzib192G0908 Durio zibethinus HOM05D006332 ORTHO05D008421 4.8e-107 392.1 275 72.0
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 1.8e-106 390.2 364 53.8
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 1.5e-105 387.1 367 51.0
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis HOM05D006332 ORTHO05D008421 2.6e-105 386.3 365 51.5
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 3.2e-103 379.4 360 50.8
CAN.G413.15 Capsicum annuum HOM05D006332 ORTHO05D008421 2.5e-100 369.8 260 69.2
SMO364G0067 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 2.1e-86 323.6 293 52.9
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.0e-85 321.2 211 78.2
SHI01800 Sapria himalayana HOM05D006332 ORTHO05D008421 1.1e-84 317.8 278 62.2
CBR_g24248 Chara braunii HOM05D006332 ORTHO05D008421 9.3e-79 298.1 382 44.0
Nitab4.5_0009738g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 2.2e-59 233.8 271 46.1
Sopen10g004770 Solanum pennellii HOM05D006332 ORTHO05D008421 1.1e-47 194.9 141 62.4
PRCOL_00003805 Prasinoderma coloniale HOM05D006332 ORTHO05D008421 5.0e-40 169.5 402 31.3
Ciclev10009862m.g Citrus clementina HOM05D006332 ORTHO05D008421 1.3e-35 154.8 102 71.6
Gohir.A10G024350 Gossypium hirsutum HOM05D006332 ORTHO05D008421 7.0e-26 122.5 89 64.0
SHI01798 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-22 110.9 138 45.7
Nitab4.5_0009738g0030 Nicotiana tabacum HOM05D006332 ORTHO05D008421 4.7e-22 109.8 91 60.4
TPR.G24681 Trifolium pratense HOM05D006332 ORTHO05D001923 5.4e-18 96.3 62 71.0
CDE02G4141 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 4.9e-11 73.2 125 36.8
Atru.chr10.1933 Acer truncatum HOM05D006332 ORTHO05D008421 6.2e-06 56.2 45 57.8


User provided reference genes

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