Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 6.4e-140 500.7 253 100.0
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 1.5e-93 346.7 254 71.7
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 2.5e-88 329.3 253 67.6
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 1.9e-83 313.2 259 66.4
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 3.2e-83 312.4 254 64.2
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 2.3e-81 306.2 234 67.5
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 2.0e-80 303.1 216 72.7
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 5.3e-78 295.0 242 66.5
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 1.3e-76 290.4 257 61.9
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 5.0e-76 288.5 257 61.5
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 1.5e-72 276.9 259 60.6
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 2.0e-72 276.6 243 62.6
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 6.3e-71 271.6 232 65.5
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 1.1e-70 270.8 258 57.4
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 1.4e-70 270.4 266 57.9
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 7.0e-70 268.1 261 60.2
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 3.5e-69 265.8 257 55.6
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 1.3e-68 263.8 257 58.0
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 5.0e-68 261.9 240 59.2
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 5.0e-68 261.9 223 61.4
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 5.0e-68 261.9 229 63.8
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 1.1e-67 260.8 225 64.4
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 1.9e-67 260.0 226 63.3
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 3.2e-67 259.2 261 57.1
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 5.5e-67 258.5 224 62.9
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 5.5e-67 258.5 221 62.0
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 5.5e-67 258.5 224 62.1
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 9.4e-67 257.7 251 58.6
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 1.6e-66 256.9 220 67.3
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 6.1e-66 255.0 176 73.3
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 1.0e-65 254.2 211 62.6
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 1.0e-65 254.2 225 62.7
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 1.0e-65 254.2 227 61.2
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 1.0e-65 254.2 226 60.6
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 1.4e-65 253.8 259 57.1
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 1.8e-65 253.4 216 63.9
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 3.0e-65 252.7 170 73.5
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 6.7e-65 251.5 214 60.7
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 2.6e-64 249.6 231 59.3
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 4.4e-64 248.8 254 57.5
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 9.7e-64 247.7 259 54.8
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 1.3e-63 247.3 216 60.2
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 1.3e-63 247.3 215 61.9
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.7e-63 246.9 231 59.7
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 2.2e-63 246.5 224 60.7
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 3.7e-63 245.7 242 59.5
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.1e-62 244.2 228 57.9
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 2.4e-62 243.0 246 57.3
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 4.1e-62 242.3 254 54.7
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 7.0e-62 241.5 240 57.1
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 2.0e-61 240.0 233 58.8
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 2.7e-61 239.6 261 56.3
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 2.7e-61 239.6 230 58.3
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 2.7e-61 239.6 257 54.1
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 4.5e-61 238.8 171 70.2
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 1.7e-60 236.9 229 58.5
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 2.2e-60 236.5 185 67.0
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 2.2e-60 236.5 185 67.0
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 5.0e-60 235.3 194 64.9
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 1.9e-59 233.4 194 64.4
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 1.9e-59 233.4 194 64.4
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 1.9e-59 233.4 216 59.3
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 1.9e-59 233.4 149 73.8
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 3.2e-59 232.6 166 70.5
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 4.2e-59 232.3 254 52.8
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 4.7e-58 228.8 179 63.7
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 8.0e-58 228.0 184 63.0
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 8.0e-58 228.0 171 67.3
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 1.8e-57 226.9 171 66.7
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 2.3e-57 226.5 212 59.4
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 3.0e-57 226.1 226 56.2
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 4.0e-57 225.7 181 65.2
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 5.2e-57 225.3 186 62.4
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 6.8e-57 224.9 253 52.6
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 8.8e-57 224.6 236 55.1
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 2.0e-56 223.4 180 64.4
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 4.4e-56 222.2 239 55.2
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 5.7e-56 221.9 192 64.6
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 9.8e-56 221.1 352 42.0
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 1.1e-54 217.6 230 53.9
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 9.1e-54 214.5 312 42.3
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 5.9e-53 211.8 181 62.4
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 5.9e-53 211.8 179 61.5
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 2.9e-52 209.5 200 60.0
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 1.9e-51 206.8 126 76.2
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 9.5e-51 204.5 171 59.6
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 4.0e-49 199.1 133 69.2
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 4.4e-48 195.7 176 59.1
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 1.4e-46 190.7 214 52.3
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 1.4e-46 190.7 230 49.1
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 1.8e-46 190.3 255 47.8
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 2.4e-46 189.9 190 55.3
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 2.7e-45 186.4 172 61.6
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 1.0e-44 184.5 181 58.0
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 3.8e-44 182.6 146 57.5
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 3.6e-42 176.0 204 50.0
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 3.6e-42 176.0 204 50.0
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 8.0e-42 174.9 283 42.8
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 2.0e-40 170.2 181 55.8
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 5.6e-35 152.1 176 46.6
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 5.6e-35 152.1 161 47.8
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 2.8e-34 149.8 111 66.7
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 3.6e-34 149.4 90 75.6
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 6.8e-33 145.2 131 55.7
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 3.2e-30 136.3 83 75.9
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 2.0e-29 133.7 152 42.8
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 8.1e-26 121.7 149 44.3
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 1.4e-25 120.9 164 43.3
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 2.3e-25 120.2 90 66.7
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 1.1e-22 111.3 89 65.2
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 2.4e-17 93.6 147 42.9
MBI18_g11113_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009042 3.5e-13 79.7 88 51.1
MELO3C030131.2 Cucumis melo HOM05D004229 ORTHO05D025211 1.4e-06 57.8 39 66.7
FAN25G1192 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.9e-06 57.4 56 64.3


User provided reference genes

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