Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03923 Nelumbo nucifera HOM05D007748 ORTHO05D009345 0.0e+00 1208.0 648 100.0
TAR627G0096 Trochodendron aralioides HOM05D007748 ORTHO05D009345 4.5e-65 253.4 629 35.8
TAR627G0547 Trochodendron aralioides HOM05D007748 ORTHO05D009345 3.8e-64 250.4 624 35.4
Nn1g06735 Nelumbo nucifera HOM05D007748 ORTHO05D009345 6.6e-56 223.0 489 37.4
Hma1.2p1_0565F.1_g179400 Hydrangea macrophylla HOM05D007748 ORTHO05D009345 6.4e-51 206.5 494 36.2
Manes.13G151000 Manihot esculenta HOM05D007748 ORTHO05D009345 6.6e-48 196.4 434 39.4
PSO675G9319 Papaver somniferum HOM05D007748 ORTHO05D009345 1.6e-46 191.8 391 37.3
Dinv23701 Davidia involucrata HOM05D007748 ORTHO05D009345 2.1e-46 191.4 491 34.4
PSO541G5470 Papaver somniferum HOM05D007748 ORTHO05D009345 1.3e-43 182.2 469 34.8
Prupe.3G232500 Prunus persica HOM05D007748 ORTHO05D009345 3.7e-43 180.6 564 31.4
Thecc.02G172800 Theobroma cacao HOM05D007748 ORTHO05D009345 4.6e-41 173.7 565 33.6
CiPaw.03G170600 Carya illinoinensis HOM05D007748 ORTHO05D009345 1.0e-40 172.6 619 32.5
RcHm_v2.0_Chr2g0162021 Rosa chinensis HOM05D007748 ORTHO05D009345 2.1e-38 164.9 424 35.6
FAN09G1549 Fragaria x ananassa HOM05D007748 ORTHO05D009345 2.8e-38 164.5 414 35.0
FvH4_6g44840 Fragaria vesca HOM05D007748 ORTHO05D009345 6.8e-37 159.8 424 34.2
TWI18G1232 Tripterygium wilfordii HOM05D007748 ORTHO05D009345 2.0e-36 158.3 669 29.1
Atru.chr6.3057 Acer truncatum HOM05D007748 ORTHO05D009345 3.4e-36 157.5 328 37.8
Eucgr.K00931 Eucalyptus grandis HOM05D007748 ORTHO05D009345 4.4e-36 157.1 639 30.2
Nitab4.5_0005244g0030 Nicotiana tabacum HOM05D012354 ORTHO05D009345 9.9e-36 156.0 668 29.3
FAN14G2142 Fragaria x ananassa HOM05D007748 ORTHO05D009345 1.3e-35 155.6 424 34.0
Aqoxy1G02767 Aquilegia oxysepala HOM05D007748 ORTHO05D009345 1.7e-35 155.2 332 40.1
FAN05G3025 Fragaria x ananassa HOM05D007748 ORTHO05D009345 1.7e-35 155.2 541 29.9
ClCG02G017390 Citrullus lanatus HOM05D007748 ORTHO05D009345 2.1e-33 148.3 322 36.0
Cfa014551 Carpinus fangiana HOM05D007748 ORTHO05D009345 7.8e-33 146.4 465 33.5
PGR142G1582 Punica granatum HOM05D007748 ORTHO05D009345 1.3e-32 145.6 161 53.4
Gohir.D02G182800 Gossypium hirsutum HOM05D007748 ORTHO05D009345 2.3e-32 144.8 606 29.0
GSVIVG01030576001 Vitis vinifera HOM05D007748 ORTHO05D009345 2.3e-32 144.8 407 33.7
QL08p037531 Quercus lobata HOM05D007748 ORTHO05D009345 6.6e-32 143.3 560 31.1
arahy.Tifrunner.gnm1.ann1.5P5A6I Arachis hypogaea HOM05D007748 ORTHO05D009345 8.7e-32 142.9 558 27.4
COL.COLO4_13689 Corchorus olitorius HOM05D007748 ORTHO05D009345 1.1e-31 142.5 479 31.3
Ciclev10018063m.g Citrus clementina HOM05D007748 ORTHO05D009345 1.5e-31 142.1 445 32.4
Phvul.011G112100 Phaseolus vulgaris HOM05D007748 ORTHO05D009345 7.3e-31 139.8 318 35.8
Haze_13098 Corylus avellana HOM05D007748 ORTHO05D009345 1.2e-30 139.0 452 33.0
VMungo1127G2014 Vigna mungo HOM05D007748 ORTHO05D009345 1.2e-30 139.0 214 42.1
MELO3C013526.2 Cucumis melo HOM05D007748 ORTHO05D009345 2.1e-30 138.3 392 36.0
arahy.Tifrunner.gnm1.ann1.SX3Q91 Arachis hypogaea HOM05D007748 ORTHO05D009345 2.8e-30 137.9 508 28.9
Gohir.D13G065125 Gossypium hirsutum HOM05D007748 ORTHO05D009345 8.1e-30 136.3 242 40.5
Actinidia09898 Actinidia chinensis HOM05D007748 ORTHO05D009345 3.1e-29 134.4 550 29.3
CsaV3_6G012500 Cucumis sativus L. HOM05D007748 ORTHO05D009345 1.2e-28 132.5 493 29.8
Gorai.013G074100 Gossypium raimondii HOM05D007748 ORTHO05D009345 1.5e-28 132.1 326 35.9
Lalb_Chr19g0135431 Lupinus albus HOM05D007748 ORTHO05D009345 1.5e-28 132.1 131 53.4
Potri.013G145900 Populus trichocarpa HOM05D007748 ORTHO05D009345 2.0e-28 131.7 583 28.5
Actinidia12452 Actinidia chinensis HOM05D007748 ORTHO05D009345 3.8e-27 127.5 547 28.3
Duzib052G0236 Durio zibethinus HOM05D007748 ORTHO05D009345 5.4e-26 123.6 575 28.2
HanXRQChr15g0480361 Helianthus annuus HOM05D007748 ORTHO05D009345 9.3e-26 122.9 158 48.1
PGR142G3499 Punica granatum HOM05D007748 ORTHO05D009345 2.1e-25 121.7 467 30.0
Ca_20695_v3 Cicer arietinum L. HOM05D007748 ORTHO05D009345 7.8e-25 119.8 518 26.4
Potri.019G109200 Populus trichocarpa HOM05D007748 ORTHO05D009345 7.8e-25 119.8 579 28.8
Gorai.005G205200 Gossypium raimondii HOM05D007748 ORTHO05D009345 1.0e-24 119.4 568 28.7
TPR.G21671 Trifolium pratense HOM05D007748 ORTHO05D009345 1.7e-24 118.6 304 34.2
Solyc12g005560.1 Solanum lycopersicum HOM05D012354 ORTHO05D009345 2.3e-24 118.2 658 27.2
Medtr4g046037 Medicago truncatula HOM05D007748 ORTHO05D009345 6.6e-24 116.7 283 34.6
Sopen12g001510 Solanum pennellii HOM05D012354 ORTHO05D009345 1.5e-23 115.5 655 27.8
Gohir.A03G159700 Gossypium hirsutum HOM05D007748 ORTHO05D009345 2.5e-23 114.8 593 26.1
arahy.Tifrunner.gnm1.ann1.MF6V35 Arachis hypogaea HOM05D007748 ORTHO05D009345 9.6e-23 112.8 224 37.9
Psat7g197200 Pisum sativum HOM05D007748 ORTHO05D009345 1.3e-22 112.5 227 37.9
Glyma.12G107600 Glycine max HOM05D007748 ORTHO05D009345 1.6e-22 112.1 523 28.7
CAN.G980.12 Capsicum annuum HOM05D012354 ORTHO05D009345 4.8e-22 110.5 361 31.6
MBI02_g35915_MAGBIO Magnolia biondii HOM05D007748 ORTHO05D009345 2.4e-21 108.2 433 28.9
Ah.15g095660 Amaranthus hybridus HOM05D007748 ORTHO05D009345 4.0e-21 107.5 343 28.9
FAN02G0221 Fragaria x ananassa HOM05D007748 ORTHO05D009345 9.0e-21 106.3 395 30.4
Lsat_1_v5_gn_3_39541 Lactuca sativa HOM05D007748 ORTHO05D009345 1.5e-20 105.5 168 42.3
Lj3g0024600 Lotus japonicus HOM05D007748 ORTHO05D009345 2.2e-19 101.7 106 51.9
Sabra19G0138300 Salix brachista HOM05D007748 ORTHO05D009345 3.2e-18 97.8 624 25.3
ECA246G0851 Erigeron canadensis HOM05D007748 ORTHO05D009345 1.0e-16 92.8 358 29.3
Os04g0636200 Oryza sativa ssp. japonica HOM05D007748 ORTHO05D009345 2.3e-16 91.7 140 41.4
Nitab4.5_0003018g0060 Nicotiana tabacum HOM05D012354 ORTHO05D009345 5.1e-16 90.5 571 24.9
AUR62037378 Chenopodium quinoa HOM05D007748 ORTHO05D009345 6.7e-16 90.1 180 36.7
Peaxi162Scf00132g00079 Petunia axillaris HOM05D012354 ORTHO05D009345 6.7e-16 90.1 689 26.1
Glyma.06G297400 Glycine max HOM05D007748 ORTHO05D009345 3.3e-15 87.8 525 26.1
Sabra19G0115100 Salix brachista HOM05D007748 ORTHO05D009345 9.6e-15 86.3 655 24.3
Zm00001eb069210 Zea mays HOM05D007748 ORTHO05D009345 1.6e-14 85.5 174 33.9
Zm00001eb431720 Zea mays HOM05D007748 ORTHO05D009345 2.1e-14 85.1 191 35.1
Sc21g0002430 Simmondsia chinensis HOM05D007748 ORTHO05D009345 3.7e-14 84.3 349 27.8
Peaxi162Scf00485g00412 Petunia axillaris HOM05D012354 ORTHO05D009345 1.1e-13 82.8 698 24.9
AUR62038940 Chenopodium quinoa HOM05D007748 ORTHO05D009345 1.8e-13 82.0 276 30.1
arahy.Tifrunner.gnm1.ann1.2C7EMU Arachis hypogaea HOM05D007748 ORTHO05D009345 1.5e-12 79.0 219 32.0
Nn1g06734 Nelumbo nucifera HOM05D007748 ORTHO05D009345 4.5e-12 77.4 61 68.9
Lalb_Chr03g0029211 Lupinus albus HOM05D007748 ORTHO05D009345 9.9e-12 76.3 327 29.4
Cpa.g.sc34.108 Carica papaya HOM05D007748 ORTHO05D009345 3.8e-11 74.3 357 26.6
Cc05_g06460 Coffea canephora HOM05D007748 ORTHO05D009345 6.4e-11 73.6 658 25.2
Sopen07g028340 Solanum pennellii HOM05D012354 ORTHO05D009345 5.5e-10 70.5 668 25.0
PGSC0003DMG400046623 Solanum tuberosum HOM05D012354 ORTHO05D009345 7.9e-09 66.6 613 24.3
HPP92_009404 Vanilla planifolia HOM05D007748 ORTHO05D009345 8.7e-08 63.2 381 23.1
ATR0693G153 Amborella trichopoda HOM05D007748 ORTHO05D009345 1.5e-07 62.4 110 39.1
Migut.M00300 Erythranthe guttata HOM05D007748 ORTHO05D009345 1.9e-07 62.0 81 43.2
DCAR_009731 Daucus carota HOM05D007748 ORTHO05D009345 9.6e-07 59.7 421 26.1
unitig_26.g9936 Utricularia gibba HOM05D007748 ORTHO05D009345 9.6e-07 59.7 235 28.5
Sed0012615 Sechium edule HOM05D007748 ORTHO05D009345 1.3e-06 59.3 512 23.4
CANSAT64G2370 Cannabis sativa HOM05D007748 ORTHO05D009345 2.1e-06 58.5 481 26.0
SGA_v2.0_scaffold70G23471 Striga asiatica HOM05D007748 ORTHO05D009345 6.2e-06 57.0 146 32.2
Zm00001eb412600 Zea mays HOM05D007748 ORTHO05D009345 8.2e-06 56.6 81 46.9


User provided reference genes

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