Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03921 Nelumbo nucifera HOM05D007448 ORTHO05D009392 9.7e-101 370.2 189 100.0
GSVIVG01014426001 Vitis vinifera HOM05D007448 ORTHO05D009392 2.7e-26 122.9 93 68.8
Eucgr.F01082 Eucalyptus grandis HOM05D007448 ORTHO05D009392 1.8e-25 120.2 79 79.7
Hma1.2p1_1003F.1_g246780 Hydrangea macrophylla HOM05D007448 ORTHO05D009392 1.5e-24 117.1 89 71.9
Hma1.2p1_1488F.1_g286625 Hydrangea macrophylla HOM05D007448 ORTHO05D009392 1.5e-24 117.1 89 71.9
TAR626G0388 Trochodendron aralioides HOM05D007448 ORTHO05D009392 5.6e-24 115.2 75 74.7
Cpa.g.sc80.111 Carica papaya HOM05D007448 ORTHO05D009392 1.8e-22 110.2 77 74.0
Gohir.D13G148600 Gossypium hirsutum HOM05D007448 ORTHO05D009392 2.4e-22 109.8 95 61.1
Gorai.013G166400 Gossypium raimondii HOM05D007448 ORTHO05D009392 2.4e-22 109.8 95 61.1
Sabra16G0269700 Salix brachista HOM05D007448 ORTHO05D009392 2.4e-22 109.8 66 84.8
Gohir.A13G143800 Gossypium hirsutum HOM05D007448 ORTHO05D009392 3.1e-22 109.4 95 61.1
Potri.001G406200 Populus trichocarpa HOM05D007448 ORTHO05D009392 3.1e-22 109.4 70 81.4
PGR083G2019 Punica granatum HOM05D007448 ORTHO05D009392 3.1e-22 109.4 92 66.3
Sc03g0009610 Simmondsia chinensis HOM05D007448 ORTHO05D009392 3.1e-22 109.4 94 59.6
Thecc.07G071800 Theobroma cacao HOM05D007448 ORTHO05D009392 4.0e-22 109.0 91 64.8
MD03G1219500 Malus domestica HOM05D007448 ORTHO05D009392 9.0e-22 107.8 84 66.7
Prupe.4G189600 Prunus persica HOM05D007448 ORTHO05D009392 1.5e-21 107.1 90 62.2
TWI39G0054 Tripterygium wilfordii HOM05D007448 ORTHO05D009392 3.4e-21 105.9 83 66.3
Atru.chr4.846 Acer truncatum HOM05D007448 ORTHO05D009392 5.8e-21 105.1 77 67.5
HanXRQChr08g0234641 Helianthus annuus HOM05D007448 ORTHO05D009392 9.9e-21 104.4 77 71.4
Lsat_1_v5_gn_5_6900 Lactuca sativa HOM05D007448 ORTHO05D009392 1.3e-20 104.0 81 66.7
Cfa020508 Carpinus fangiana HOM05D007448 ORTHO05D009392 2.9e-20 102.8 82 65.9
CsaV3_3G044380 Cucumis sativus L. HOM05D007448 ORTHO05D009392 2.9e-20 102.8 77 68.8
CiPaw.11G176100 Carya illinoinensis HOM05D007448 ORTHO05D009392 3.8e-20 102.4 77 70.1
Duzib213G0053 Durio zibethinus HOM05D007448 ORTHO05D009392 3.8e-20 102.4 77 72.7
CDE02G3786 Ceratophyllum demersum HOM05D007448 ORTHO05D009392 1.1e-19 100.9 87 63.2
Glyma.06G253900 Glycine max HOM05D007448 ORTHO05D009392 1.1e-19 100.9 65 76.9
RcHm_v2.0_Chr5g0035321 Rosa chinensis HOM05D007448 ORTHO05D009392 1.1e-19 100.9 85 64.7
Solyc12g013500.2 Solanum lycopersicum HOM05D007448 ORTHO05D009392 1.4e-19 100.5 94 59.6
ClCG11G018440 Citrullus lanatus HOM05D007448 ORTHO05D009392 1.9e-19 100.1 77 68.8
DCAR_021403 Daucus carota HOM05D007448 ORTHO05D009392 2.5e-19 99.8 94 58.5
Manes.03G111700 Manihot esculenta HOM05D007448 ORTHO05D009392 3.2e-19 99.4 77 70.1
Sopen12g006840 Solanum pennellii HOM05D007448 ORTHO05D009392 3.2e-19 99.4 94 58.5
Aqoxy4G01379 Aquilegia oxysepala HOM05D007448 ORTHO05D009392 4.2e-19 99.0 97 58.8
AUR62015605 Chenopodium quinoa HOM05D007448 ORTHO05D009392 4.2e-19 99.0 74 67.6
Nitab4.5_0000639g0040 Nicotiana tabacum HOM05D007448 ORTHO05D009392 5.5e-19 98.6 94 58.5
Ciclev10010083m.g Citrus clementina HOM05D007448 ORTHO05D009392 7.1e-19 98.2 77 68.8
PGSC0003DMG400008573 Solanum tuberosum HOM05D007448 ORTHO05D009392 7.1e-19 98.2 94 57.4
Sed0026843 Sechium edule HOM05D007448 ORTHO05D009392 9.3e-19 97.8 77 67.5
Phvul.011G154800 Phaseolus vulgaris HOM05D007448 ORTHO05D009392 1.2e-18 97.4 65 73.8
Ciclev10010683m.g Citrus clementina HOM05D007448 ORTHO05D009392 2.7e-18 96.3 71 71.8
CSS0027029 Camellia sinensis var. sinensis HOM05D007448 ORTHO05D009392 3.5e-18 95.9 75 61.3
Oeu019361.1 Olea europaea HOM05D007448 ORTHO05D009392 3.5e-18 95.9 63 77.8
Peaxi162Scf00000g00504 Petunia axillaris HOM05D007448 ORTHO05D009392 3.5e-18 95.9 86 59.3
CANSAT11G1525 Cannabis sativa HOM05D007448 ORTHO05D009392 1.3e-17 94.0 94 53.2
Nitab4.5_0008360g0010 Nicotiana tabacum HOM05D007448 ORTHO05D009392 1.3e-17 94.0 94 56.4
arahy.Tifrunner.gnm1.ann1.UX5IA9 Arachis hypogaea HOM05D007448 ORTHO05D009392 1.8e-17 93.6 94 56.4
Rhsim04G0017500 Rhododendron simsii HOM05D007448 ORTHO05D009392 1.8e-17 93.6 86 62.8
FAN25G3793 Fragaria x ananassa HOM05D007448 ORTHO05D009392 2.3e-17 93.2 98 54.1
PSO421G0428 Papaver somniferum HOM05D007448 ORTHO05D009392 2.3e-17 93.2 85 62.4
FvH4_3g20900 Fragaria vesca HOM05D007448 ORTHO05D009392 3.0e-17 92.8 85 60.0
Lj3g0013278 Lotus japonicus HOM05D007448 ORTHO05D009392 3.9e-17 92.4 65 72.3
THA.LOC104822630 Tarenaya hassleriana HOM05D007448 ORTHO05D009392 5.1e-17 92.0 78 61.5
arahy.Tifrunner.gnm1.ann1.GZ4R1Y Arachis hypogaea HOM05D007448 ORTHO05D009392 6.7e-17 91.7 95 53.7
Migut.M00875 Erythranthe guttata HOM05D007448 ORTHO05D009392 6.7e-17 91.7 67 71.6
FAN21G3287 Fragaria x ananassa HOM05D007448 ORTHO05D009392 8.7e-17 91.3 98 53.1
Medtr7g057740 Medicago truncatula HOM05D007448 ORTHO05D009392 8.7e-17 91.3 94 50.0
Actinidia18748 Actinidia chinensis HOM05D007448 ORTHO05D009392 1.1e-16 90.9 55 80.0
CDE05G1526 Ceratophyllum demersum HOM05D007448 ORTHO05D009392 1.1e-16 90.9 66 69.7
Gohir.A11G075500 Gossypium hirsutum HOM05D007448 ORTHO05D009392 1.5e-16 90.5 95 54.7
MELO3C018199.2 Cucumis melo HOM05D003028 ORTHO05D003465 1.9e-16 90.1 61 75.4
Gorai.007G085800 Gossypium raimondii HOM05D007448 ORTHO05D009392 1.9e-16 90.1 67 68.7
BcaC06g35910 Brassica carinata HOM05D007448 ORTHO05D009392 2.5e-16 89.7 96 52.1
BolC7t41418H Brassica oleracea HOM05D007448 ORTHO05D009392 2.5e-16 89.7 96 52.1
Thhalv10021866m.g Eutrema salsugineum HOM05D007448 ORTHO05D009392 2.5e-16 89.7 68 61.8
Cc06_g05250 Coffea canephora HOM05D007448 ORTHO05D009392 3.3e-16 89.4 66 69.7
Sp3g23710 Schrenkiella parvula HOM05D007448 ORTHO05D009392 3.3e-16 89.4 68 61.8
Psat3g145520 Pisum sativum HOM05D007448 ORTHO05D009392 4.3e-16 89.0 83 57.8
TPR.G23252 Trifolium pratense HOM05D007448 ORTHO05D009392 4.3e-16 89.0 86 55.8
vmacro09556 Vaccinium macrocarpon HOM05D007448 ORTHO05D009392 7.4e-16 88.2 89 58.4
ECA246G0067 Erigeron canadensis HOM05D007448 ORTHO05D009392 1.6e-15 87.0 67 70.1
QL08p018291 Quercus lobata HOM05D007448 ORTHO05D009392 2.8e-15 86.3 67 65.7
AL3G25660 Arabidopsis lyrata HOM05D007448 ORTHO05D009392 4.8e-15 85.5 79 55.7
Carub.0003s1319 Capsella rubella HOM05D007448 ORTHO05D009392 6.2e-15 85.1 79 55.7
A07p06520 Brassica napus HOM05D007448 ORTHO05D009392 8.2e-15 84.7 96 51.0
BraA07t28447Z Brassica rapa HOM05D007448 ORTHO05D009392 8.2e-15 84.7 96 51.0
unitig_899.g15312 Utricularia gibba HOM05D007448 ORTHO05D009392 1.8e-14 83.6 67 64.2
AT3G13677 Arabidopsis thaliana HOM05D007448 ORTHO05D009392 2.4e-14 83.2 79 54.4
BcaB06g26831 Brassica carinata HOM05D007448 ORTHO05D009392 2.4e-14 83.2 79 54.4
Os03g0581650 Oryza sativa ssp. japonica HOM05D007448 ORTHO05D009392 6.9e-14 81.6 87 52.9
Aa31LG8G850 Aethionema arabicum HOM05D007448 ORTHO05D009392 1.2e-13 80.9 68 57.4
Oeu006763.2 Olea europaea HOM05D007448 ORTHO05D009392 1.3e-12 77.4 84 51.2
EL10Ac4g09050 Beta vulgaris HOM05D007448 ORTHO05D009392 1.7e-12 77.0 54 70.4
Zm00001eb049080 Zea mays HOM05D007448 ORTHO05D009392 2.2e-12 76.6 59 66.1
AUR62035371 Chenopodium quinoa HOM05D007448 ORTHO05D009392 8.4e-12 74.7 64 59.4
AUR62035373 Chenopodium quinoa HOM05D007448 ORTHO05D009392 8.4e-12 74.7 64 59.4
Glyma.12G147500 Glycine max HOM05D007448 ORTHO05D009392 8.4e-12 74.7 46 76.1
Lalb_Chr03g0030401 Lupinus albus HOM05D007448 ORTHO05D009392 8.4e-12 74.7 65 61.5
Hund02207 Selenicereus undatus HOM05D007448 ORTHO05D009392 8.4e-12 74.7 75 52.0
Ah.06g183620 Amaranthus hybridus HOM05D007448 ORTHO05D009392 1.4e-11 73.9 49 73.5
AUR62029317 Chenopodium quinoa HOM05D007448 ORTHO05D009392 4.2e-11 72.4 67 58.2
CAN.G1320.10 Capsicum annuum HOM05D007448 ORTHO05D009392 7.1e-11 71.6 76 52.6
C07p09790 Brassica napus HOM05D004899 ORTHO05D006580 9.3e-11 71.2 73 50.7
SalBow8G2366 Salvia bowleyana HOM05D007448 ORTHO05D009392 3.5e-10 69.3 48 68.8
MSTRG.14378 Avicennia marina HOM05D007448 ORTHO05D009392 5.1e-09 65.5 48 64.6
FAN11G2341 Fragaria x ananassa HOM05D007448 ORTHO05D009392 8.7e-09 64.7 66 53.0
Atru.chr2.2826 Acer truncatum HOM05D007448 ORTHO05D009392 7.4e-08 61.6 64 60.9
Pp3c7_12690 Physcomitrium patens HOM05D007448 ORTHO05D009392 2.8e-07 59.7 60 50.0
Mapoly0162s0010 Marchantia polymorpha HOM05D007448 ORTHO05D009392 3.7e-07 59.3 62 51.6
MELO3C030681.2 Cucumis melo HOM05D007448 ORTHO05D009392 1.4e-06 57.4 47 59.6
Pp3c3_18440 Physcomitrium patens HOM05D007448 ORTHO05D009392 1.8e-06 57.0 59 52.5
Haze_09525 Corylus avellana HOM05D008666 ORTHO05D009871 2.4e-06 56.6 48 60.4


User provided reference genes

Program Settings