Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03914 Nelumbo nucifera HOM05D007566 ORTHO05D009505 2.9e-35 151.8 100 100.0
TAR627G0519 Trochodendron aralioides HOM05D007566 ORTHO05D009505 6.0e-25 117.5 100 68.0
TAR371G0602 Trochodendron aralioides HOM05D007566 ORTHO05D009505 5.6e-23 110.9 102 65.7
Duzib213G0757 Durio zibethinus HOM05D007566 ORTHO05D009505 2.3e-16 89.0 100 53.0
PSO541G1909 Papaver somniferum HOM05D007566 ORTHO05D009505 2.3e-16 89.0 102 54.9
CiPaw.11G176600 Carya illinoinensis HOM05D007566 ORTHO05D009505 5.1e-16 87.8 100 53.0
Dinv08341 Davidia involucrata HOM05D007566 ORTHO05D009505 1.1e-15 86.7 98 54.1
COL.COLO4_09480 Corchorus olitorius HOM05D007566 ORTHO05D009505 1.6e-14 82.8 100 49.0
PSO675G4296 Papaver somniferum HOM05D007566 ORTHO05D009505 1.6e-14 82.8 102 52.0
CANSAT11G1965 Cannabis sativa HOM05D007566 ORTHO05D009505 8.1e-14 80.5 100 53.0
Thecc.07G071100 Theobroma cacao HOM05D007566 ORTHO05D009505 8.1e-14 80.5 101 53.5
MELO3C016554.2 Cucumis melo HOM05D007566 ORTHO05D009505 1.4e-13 79.7 100 49.0
Nitab4.5_0000297g0110 Nicotiana tabacum HOM05D007566 ORTHO05D009505 1.8e-13 79.3 100 52.0
Ciclev10010014m.g Citrus clementina HOM05D007566 ORTHO05D009505 2.4e-13 79.0 100 49.0
MD11G1237100 Malus domestica HOM05D007566 ORTHO05D009505 2.4e-13 79.0 100 50.0
Prupe.4G190300 Prunus persica HOM05D007566 ORTHO05D009505 4.0e-13 78.2 100 50.0
Sabra16G0268300 Salix brachista HOM05D007566 ORTHO05D009505 4.0e-13 78.2 101 54.5
Sabra16G0270600 Salix brachista HOM05D007566 ORTHO05D009505 4.0e-13 78.2 101 54.5
Hund23375 Selenicereus undatus HOM05D007566 ORTHO05D009505 4.0e-13 78.2 103 50.5
EL10Ac4g08058 Beta vulgaris HOM05D007566 ORTHO05D009505 5.3e-13 77.8 100 49.0
Gohir.A01G068600 Gossypium hirsutum HOM05D007566 ORTHO05D009505 6.9e-13 77.4 100 56.0
Potri.001G406900 Populus trichocarpa HOM05D007566 ORTHO05D009505 6.9e-13 77.4 101 54.5
Actinidia39409 Actinidia chinensis HOM05D007566 ORTHO05D009505 1.2e-12 76.6 102 58.8
Gohir.D01G055900 Gossypium hirsutum HOM05D007566 ORTHO05D009505 1.5e-12 76.3 100 56.0
Aqoxy1G02746 Aquilegia oxysepala HOM05D007566 ORTHO05D009505 2.0e-12 75.9 99 47.5
Gorai.002G076000 Gossypium raimondii HOM05D007566 ORTHO05D009505 2.0e-12 75.9 100 56.0
Ah.04g165410 Amaranthus hybridus HOM05D007566 ORTHO05D009505 3.4e-12 75.1 101 49.5
PGR083G0896 Punica granatum HOM05D007566 ORTHO05D009505 4.5e-12 74.7 100 49.0
Manes.15G083200 Manihot esculenta HOM05D007566 ORTHO05D009505 5.8e-12 74.3 100 50.0
GSVIVG01014436001 Vitis vinifera HOM05D007566 ORTHO05D009505 5.8e-12 74.3 104 49.0
CsaV3_3G005960 Cucumis sativus L. HOM05D007566 ORTHO05D009505 7.6e-12 73.9 100 48.0
Lalb_Chr25g0286741 Lupinus albus HOM05D007566 ORTHO05D009505 7.6e-12 73.9 101 48.5
CDE05G3101 Ceratophyllum demersum HOM05D007566 ORTHO05D009505 1.0e-11 73.6 101 46.5
Eucgr.F01078 Eucalyptus grandis HOM05D007566 ORTHO05D009505 1.0e-11 73.6 101 59.4
Oeu030434.1 Olea europaea HOM05D007566 ORTHO05D009505 2.2e-11 72.4 104 50.0
Psat5g246560 Pisum sativum HOM05D007566 ORTHO05D009505 2.2e-11 72.4 101 49.5
TPR.G32847 Trifolium pratense HOM05D007566 ORTHO05D009505 2.2e-11 72.4 101 49.5
Glyma.12G219500 Glycine max HOM05D007566 ORTHO05D009505 6.5e-11 70.9 102 49.0
Cc05_g12690 Coffea canephora HOM05D007566 ORTHO05D009505 8.4e-11 70.5 103 48.5
Cpa.g.sc389.3 Carica papaya HOM05D007566 ORTHO05D009505 2.5e-10 68.9 100 47.0
Phvul.005G086000 Phaseolus vulgaris HOM05D007566 ORTHO05D009505 2.5e-10 68.9 101 46.5
Migut.M01859 Erythranthe guttata HOM05D007566 ORTHO05D009505 4.2e-10 68.2 100 45.0
Nitab4.5_0008686g0030 Nicotiana tabacum HOM05D007566 ORTHO05D009505 4.2e-10 68.2 100 55.0
Glyma.13G281800 Glycine max HOM05D007566 ORTHO05D009505 5.5e-10 67.8 102 46.1
TWI39G1107 Tripterygium wilfordii HOM05D007566 ORTHO05D009505 5.5e-10 67.8 100 46.0
Rhsim06G0192900 Rhododendron simsii HOM05D007566 ORTHO05D009505 9.3e-10 67.0 103 45.6
FvH4_3g21000 Fragaria vesca HOM05D007566 ORTHO05D009505 2.7e-09 65.5 100 44.0
FAN11G3987 Fragaria x ananassa HOM05D007566 ORTHO05D009505 2.7e-09 65.5 100 44.0
Zm00001eb106900 Zea mays HOM05D007566 ORTHO05D009505 3.5e-09 65.1 111 41.4
Atru.chr2.2863 Acer truncatum HOM05D007566 ORTHO05D009505 4.6e-09 64.7 100 45.0
FAN21G0859 Fragaria x ananassa HOM05D007566 ORTHO05D009505 7.9e-09 63.9 100 55.0
Solyc07g063575.1 Solanum lycopersicum HOM05D007566 ORTHO05D009505 7.9e-09 63.9 100 48.0
Sopen07g031760 Solanum pennellii HOM05D007566 ORTHO05D009505 7.9e-09 63.9 100 48.0
Aa31LG5G10140 Aethionema arabicum HOM05D007566 ORTHO05D009505 1.0e-08 63.5 102 46.1
Medtr2g080990 Medicago truncatula HOM05D007566 ORTHO05D009505 1.0e-08 63.5 100 48.0
GSVIVG01014434001 Vitis vinifera HOM05D007566 ORTHO05D009505 1.8e-08 62.8 77 51.9
FAN25G3649 Fragaria x ananassa HOM05D007566 ORTHO05D009505 3.0e-08 62.0 100 42.0
Sp7g25310 Schrenkiella parvula HOM05D007566 ORTHO05D009505 3.9e-08 61.6 103 44.7
PGSC0003DMG401019249 Solanum tuberosum HOM05D007566 ORTHO05D009505 3.9e-08 61.6 100 46.0
Lj3g0013461 Lotus japonicus HOM05D007566 ORTHO05D009505 6.7e-08 60.8 102 47.1
ClCG10G006500 Citrullus lanatus HOM05D007566 ORTHO05D009505 8.7e-08 60.5 100 42.0
HanXRQChr05g0151621 Helianthus annuus HOM05D007566 ORTHO05D009505 1.1e-07 60.1 102 43.1
ATR0693G417 Amborella trichopoda HOM05D007566 ORTHO05D009505 1.5e-07 59.7 71 50.7
ECA246G4377 Erigeron canadensis HOM05D007566 ORTHO05D009505 1.5e-07 59.7 102 44.1
THA.LOC104811846 Tarenaya hassleriana HOM05D007566 ORTHO05D009505 1.5e-07 59.7 101 43.6
Peaxi162Scf01216g00052 Petunia axillaris HOM05D007566 ORTHO05D009505 3.3e-07 58.5 100 57.0
arahy.Tifrunner.gnm1.ann1.MQ63GR Arachis hypogaea HOM05D007566 ORTHO05D009505 4.3e-07 58.2 108 42.6
RcHm_v2.0_Chr5g0035981 Rosa chinensis HOM05D007566 ORTHO05D009505 4.3e-07 58.2 100 40.0
Sc16g0006770 Simmondsia chinensis HOM05D007566 ORTHO05D009505 5.7e-07 57.8 100 44.0
Hma1.2p1_3251F.1_g334500 Hydrangea macrophylla HOM05D007566 ORTHO05D009505 7.4e-07 57.4 106 42.5
Solyc10g047330.1 Solanum lycopersicum HOM05D007566 ORTHO05D009505 9.6e-07 57.0 100 57.0
BraA01t01804Z Brassica rapa HOM05D007566 ORTHO05D009505 1.3e-06 56.6 104 43.3
BcaNung07200 Brassica carinata HOM05D007566 ORTHO05D009505 2.8e-06 55.5 105 41.9
C01p23510 Brassica napus HOM05D007566 ORTHO05D009505 2.8e-06 55.5 105 41.9
BolC1t02296H Brassica oleracea HOM05D007566 ORTHO05D009505 2.8e-06 55.5 105 41.9
AUR62015600 Chenopodium quinoa HOM05D007566 ORTHO05D009505 2.8e-06 55.5 100 42.0
arahy.Tifrunner.gnm1.ann1.YDUQ9T Arachis hypogaea HOM05D007566 ORTHO05D009505 3.7e-06 55.1 108 41.7


User provided reference genes

Program Settings