Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 0.0e+00 1410.2 690 100.0
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 1.0e-264 916.8 701 67.5
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 3.8e-251 871.7 706 65.0
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 1.0e-240 837.0 683 64.1
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 5.4e-234 814.7 628 67.5
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 1.6e-230 803.1 678 62.7
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 3.9e-216 755.4 681 61.1
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 1.5e-207 726.9 668 58.2
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 4.5e-204 715.3 644 60.2
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 1.0e-203 714.1 678 58.8
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 3.8e-203 712.2 672 59.2
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 1.4e-202 710.3 514 68.7
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 3.7e-198 695.7 675 56.1
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 8.2e-198 694.5 696 55.7
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 1.1e-197 694.1 676 56.2
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 1.0e-195 687.6 662 56.0
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 3.8e-195 685.6 659 56.1
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 2.7e-193 679.5 673 57.7
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 6.7e-192 674.9 680 54.3
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 3.3e-191 672.5 595 59.0
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 9.7e-191 671.0 669 55.2
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 1.7e-190 670.2 684 55.7
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 8.2e-190 667.9 647 56.1
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 7.0e-189 664.8 672 55.5
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 2.6e-188 662.9 680 54.0
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 2.6e-188 662.9 434 71.9
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 7.7e-188 661.4 514 63.8
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 7.2e-186 654.8 685 53.6
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 9.4e-186 654.4 577 59.3
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 4.7e-185 652.1 678 53.5
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 2.3e-184 649.8 509 65.0
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 5.7e-183 645.2 444 70.3
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 7.5e-183 644.8 701 51.2
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 4.8e-182 642.1 540 61.9
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 1.2e-180 637.5 559 58.7
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 6.5e-179 631.7 669 53.1
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 1.9e-178 630.2 553 60.0
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 4.2e-178 629.0 647 54.9
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 5.5e-178 628.6 552 58.5
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 7.2e-178 628.2 408 72.3
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 2.7e-177 626.3 506 62.1
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 3.6e-177 625.9 503 61.2
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 8.0e-177 624.8 552 58.3
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 1.8e-176 623.6 503 61.0
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 2.3e-176 623.2 695 50.9
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 2.0e-175 620.2 515 60.4
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 9.8e-175 617.8 496 62.7
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 2.2e-174 616.7 655 53.0
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 3.1e-173 612.8 470 64.3
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 5.4e-173 612.1 522 60.9
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 3.5e-172 609.4 492 62.4
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 8.6e-171 604.7 511 61.8
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 8.0e-169 598.2 453 65.1
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 6.8e-168 595.1 651 51.2
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 3.7e-166 589.3 683 50.1
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.1e-165 587.8 420 68.6
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 3.5e-164 582.8 505 58.2
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 7.8e-164 581.6 509 57.8
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 3.3e-162 576.2 459 61.4
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 6.8e-160 568.5 680 47.4
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 4.4e-159 565.8 644 51.4
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 9.8e-159 564.7 505 56.8
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 4.1e-157 559.3 587 51.4
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 1.3e-155 554.3 587 51.4
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 5.0e-155 552.4 545 55.2
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 9.8e-151 538.1 408 63.2
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 2.3e-147 526.9 489 55.8
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 5.6e-138 495.7 466 56.4
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 2.8e-137 493.4 469 55.2
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 7.3e-122 442.2 287 74.6
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 8.7e-115 418.7 415 55.4
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 5.5e-109 399.4 426 48.4
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 1.8e-107 394.4 504 49.0
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 1.9e-101 374.4 264 70.1
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 6.7e-91 339.3 478 47.5
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 1.7e-86 324.7 413 49.6
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 7.2e-85 319.3 287 58.2
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 1.0e-83 315.5 370 47.6
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 2.0e-66 258.1 280 50.7
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 1.0e-59 235.7 192 59.9
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 4.1e-40 170.6 133 57.9
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 5.6e-37 160.2 143 60.1
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 6.2e-36 156.8 314 39.2
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 8.1e-36 156.4 133 60.2
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 7.3e-29 133.3 78 76.9
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 6.4e-25 120.2 326 31.3
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 4.0e-19 100.9 126 46.0
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 4.6e-15 87.4 79 55.7
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 1.3e-12 79.3 223 28.7
PRCOL_00005975 Prasinoderma coloniale HOM05D000032 ORTHO05D028824 1.5e-10 72.4 185 28.1
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 7.6e-10 70.1 172 32.0
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 1.3e-09 69.3 45 64.4
EL10Ac8g20531 Beta vulgaris HOM05D007621 ORTHO05D009631 1.1e-08 66.2 307 28.3
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 1.9e-08 65.5 57 50.9
SGA_v2.0_scaffold26G11386 Striga asiatica HOM05D007621 ORTHO05D009631 7.9e-07 60.1 58 51.7
Haze_26842 Corylus avellana HOM05D000032 ORTHO05D028824 3.9e-06 57.8 179 27.9


User provided reference genes

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