Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 1.8e-148 529.3 271 100.0
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 8.2e-93 344.4 269 68.0
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 6.5e-66 255.0 266 55.3
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 8.3e-61 238.0 260 54.6
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 2.1e-56 223.4 260 52.3
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 4.9e-45 185.7 268 47.0
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 3.2e-44 183.0 259 45.6
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 5.4e-44 182.2 233 51.9
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 5.4e-44 182.2 284 43.0
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 3.5e-43 179.5 267 44.9
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 1.7e-42 177.2 246 46.7
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 8.6e-42 174.9 255 45.1
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 1.1e-41 174.5 267 46.8
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 1.1e-41 174.5 262 44.3
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 2.5e-41 173.3 233 47.2
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 3.3e-41 172.9 267 46.4
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 5.6e-41 172.2 254 44.5
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 2.8e-40 169.9 281 42.0
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 4.7e-40 169.1 274 44.5
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 8.0e-40 168.3 264 43.6
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 2.3e-39 166.8 251 41.8
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 6.8e-39 165.2 197 51.3
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 6.8e-39 165.2 241 46.5
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 1.5e-38 164.1 268 42.2
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 1.5e-38 164.1 251 43.4
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 2.0e-38 163.7 302 41.1
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.7e-37 160.6 262 45.8
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 2.2e-37 160.2 283 37.8
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 8.3e-37 158.3 270 40.7
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 8.3e-37 158.3 263 44.1
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 7.0e-36 155.2 221 43.9
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 9.2e-36 154.8 263 44.1
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 1.2e-35 154.5 274 42.0
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.2e-35 154.5 274 42.0
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 2.7e-35 153.3 241 45.6
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 2.7e-35 153.3 229 46.7
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 7.8e-35 151.8 249 44.2
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 1.0e-34 151.4 246 44.7
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 2.5e-33 146.7 228 44.3
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 4.3e-33 146.0 236 44.5
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 5.6e-33 145.6 237 42.2
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 7.3e-33 145.2 267 42.3
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 1.2e-32 144.4 256 40.2
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 1.6e-32 144.1 267 40.8
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 2.1e-32 143.7 229 41.5
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 3.6e-32 142.9 247 40.1
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 1.8e-31 140.6 291 38.8
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 1.8e-31 140.6 231 41.1
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 4.0e-31 139.4 194 45.4
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 4.0e-31 139.4 235 44.7
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 5.2e-31 139.0 276 40.2
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 6.8e-31 138.7 267 39.7
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 1.5e-30 137.5 139 55.4
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 2.6e-30 136.7 218 40.4
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 1.3e-29 134.4 240 42.1
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 1.3e-29 134.4 251 41.4
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 2.2e-29 133.7 259 37.1
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 8.3e-29 131.7 264 40.9
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.1e-28 131.3 245 37.1
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 2.4e-28 130.2 240 40.0
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 4.1e-28 129.4 244 40.2
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 5.4e-28 129.0 247 40.9
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 7.1e-28 128.6 247 40.9
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 9.2e-28 128.3 247 41.7
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 9.2e-28 128.3 260 36.5
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.2e-27 127.9 252 40.5
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 1.2e-27 127.9 258 36.4
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 1.6e-27 127.5 185 44.9
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 2.7e-27 126.7 241 39.4
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.0e-26 124.8 278 38.1
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 1.3e-26 124.4 272 37.5
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 1.7e-26 124.0 258 35.3
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 8.6e-26 121.7 241 41.5
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 7.3e-25 118.6 235 39.1
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 3.6e-24 116.3 241 38.6
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 8.1e-24 115.2 278 35.6
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 1.1e-23 114.8 245 42.4
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.4e-23 113.6 273 35.2
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 4.4e-22 109.4 256 37.1
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 7.6e-22 108.6 230 36.1
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 7.6e-22 108.6 240 37.5
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 9.9e-22 108.2 129 48.8
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 1.7e-21 107.5 247 35.6
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 2.9e-21 106.7 244 36.9
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 2.9e-21 106.7 163 44.8
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 4.9e-21 105.9 223 39.0
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 1.4e-20 104.4 242 35.1
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 1.9e-20 104.0 195 37.4
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 9.2e-20 101.7 269 35.3
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 2.1e-19 100.5 250 36.4
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 2.7e-19 100.1 238 37.4
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 2.7e-19 100.1 244 36.5
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 7.8e-19 98.6 232 38.8
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 1.0e-18 98.2 270 33.0
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 1.3e-18 97.8 240 37.9
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 1.7e-18 97.4 238 37.4
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.3e-18 97.1 227 38.8
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 3.9e-18 96.3 238 37.4
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 5.1e-18 95.9 202 38.1
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 5.1e-18 95.9 284 33.5
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 3.3e-17 93.2 239 36.8
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 5.6e-17 92.4 120 45.8
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 7.3e-17 92.0 248 35.5
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 2.1e-16 90.5 331 29.9
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 6.2e-16 89.0 252 36.5
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 1.8e-15 87.4 238 33.2
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 4.0e-15 86.3 235 31.5
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 4.0e-15 86.3 127 41.7
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 5.3e-15 85.9 125 44.0
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 6.9e-15 85.5 222 38.3
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 6.9e-15 85.5 222 38.3
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 1.5e-14 84.3 242 34.3
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 6.4e-13 79.0 67 58.2
HPP92_012357 Vanilla planifolia HOM05D006486 ORTHO05D007888 3.5e-11 73.2 238 33.6
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 2.5e-09 67.0 306 30.4
Oeu021600.1 Olea europaea HOM05D006486 ORTHO05D007888 4.8e-08 62.8 78 51.3
Nitab4.5_0001007g0050 Nicotiana tabacum HOM05D006486 ORTHO05D007888 4.5e-06 56.2 225 31.1


User provided reference genes

Program Settings