Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 1.2e-197 693.0 356 100.0
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 3.4e-107 392.5 360 61.1
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 2.7e-104 382.9 355 60.0
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 1.0e-103 380.9 357 59.9
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 4.8e-101 372.1 365 56.4
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 5.3e-100 368.6 365 56.2
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 2.9e-98 362.8 358 57.8
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 8.5e-98 361.3 365 58.1
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 1.1e-97 360.9 363 58.4
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 1.9e-97 360.1 290 64.8
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 5.5e-97 358.6 368 54.1
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 3.6e-96 355.9 351 57.5
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 6.1e-96 355.1 317 60.3
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 6.1e-96 355.1 354 58.2
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 1.0e-95 354.4 360 56.1
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 1.8e-95 353.6 269 67.7
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 2.3e-95 353.2 319 61.8
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 4.0e-95 352.4 363 56.5
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 1.5e-94 350.5 351 56.1
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 2.6e-94 349.7 312 58.3
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 3.3e-94 349.4 353 56.1
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 5.7e-94 348.6 318 60.4
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 7.5e-94 348.2 289 63.3
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 7.5e-94 348.2 318 60.7
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 9.7e-94 347.8 269 67.3
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 1.3e-93 347.4 350 56.6
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 1.7e-93 347.1 349 55.0
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 1.1e-92 344.4 357 55.2
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 1.4e-92 344.0 311 59.5
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 1.8e-92 343.6 361 54.3
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 2.0e-91 340.1 256 67.2
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 2.7e-91 339.7 322 55.6
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 5.9e-91 338.6 322 55.9
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 7.7e-91 338.2 357 54.1
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 1.3e-90 337.4 287 60.3
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 1.7e-90 337.0 255 65.5
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 2.9e-90 336.3 361 55.4
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 1.1e-89 334.3 299 57.9
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 1.1e-89 334.3 349 52.7
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 2.5e-89 333.2 368 52.4
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 2.5e-89 333.2 360 54.2
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 4.2e-89 332.4 256 65.6
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 7.2e-89 331.6 320 55.0
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 7.2e-89 331.6 359 52.9
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 1.6e-88 330.5 300 58.3
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 1.6e-88 330.5 355 51.8
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 2.1e-88 330.1 365 52.6
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 4.7e-88 328.9 355 51.5
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 6.1e-88 328.6 288 58.7
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 1.4e-87 327.4 311 57.6
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 1.8e-87 327.0 335 53.7
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 2.3e-87 326.6 355 53.2
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 2.6e-86 323.2 366 50.8
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 2.6e-86 323.2 355 53.2
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 2.6e-86 323.2 351 51.9
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 9.8e-86 321.2 294 59.2
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 2.8e-85 319.7 317 56.8
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 2.8e-85 319.7 325 52.6
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 3.7e-85 319.3 337 53.4
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 4.8e-85 318.9 363 51.0
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 4.8e-85 318.9 359 49.9
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 1.1e-84 317.8 267 61.4
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.4e-84 317.4 317 56.5
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 1.8e-84 317.0 300 54.7
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 3.1e-84 316.2 316 55.4
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 4.1e-84 315.8 267 60.7
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 5.4e-84 315.5 297 57.2
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 5.4e-84 315.5 279 60.2
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 7.0e-84 315.1 317 56.5
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 9.1e-84 314.7 278 60.4
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 1.2e-83 314.3 264 60.6
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 1.2e-83 314.3 330 52.4
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 2.0e-83 313.5 267 60.7
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 2.0e-83 313.5 291 56.0
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 2.7e-83 313.2 294 58.5
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 3.5e-83 312.8 267 60.7
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 4.5e-83 312.4 317 55.5
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 5.9e-83 312.0 354 49.2
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 1.0e-82 311.2 264 60.2
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 2.2e-82 310.1 360 53.1
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 5.0e-82 308.9 278 58.3
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 6.5e-82 308.5 330 51.5
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 1.1e-81 307.8 366 50.5
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 1.5e-81 307.4 357 49.3
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.9e-81 307.0 317 55.5
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 3.2e-81 306.2 316 52.8
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 3.2e-81 306.2 391 46.0
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 9.4e-81 304.7 266 59.0
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 1.2e-80 304.3 374 49.7
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 1.0e-79 301.2 291 56.4
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 4.0e-79 299.3 334 51.5
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 9.8e-78 294.7 301 51.5
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 1.3e-77 294.3 331 50.5
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 2.8e-77 293.1 281 57.3
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 3.7e-77 292.7 267 59.2
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 1.2e-75 287.7 323 49.2
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 7.3e-73 278.5 260 58.1
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 6.8e-71 271.9 319 50.5
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 6.8e-71 271.9 231 60.2
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 1.2e-70 271.2 275 53.8
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 2.6e-70 270.0 230 60.4
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 1.7e-66 257.3 215 59.5
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 1.2e-64 251.1 230 59.1
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 2.1e-64 250.4 260 54.2
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 3.4e-46 189.9 164 61.6
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 1.6e-43 181.0 162 58.6
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 6.9e-31 139.0 136 53.7
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 3.0e-26 123.6 310 31.0
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 4.3e-17 93.2 77 63.6
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 2.4e-15 87.4 177 35.0
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 9.0e-15 85.5 270 25.9
ATR0693G306 Amborella trichopoda HOM05D006917 ORTHO05D008297 6.5e-13 79.3 59 61.0
Pp3c2_31610 Physcomitrium patens HOM05D037891 ORTHO05D008297 7.4e-09 65.9 328 24.4
Aqoxy3G03603 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 1.3e-08 65.1 79 50.6
Oeu039864.1 Olea europaea HOM05D006917 ORTHO05D008297 3.7e-08 63.5 55 58.2


User provided reference genes

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