Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 4.7e-253 877.5 467 100.0
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 4.3e-137 492.3 468 61.5
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 8.3e-133 478.0 422 63.5
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 2.1e-131 473.4 478 57.9
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 3.9e-122 442.6 471 57.5
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 3.9e-122 442.6 473 58.1
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 1.2e-120 437.6 471 56.9
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 8.4e-117 424.9 467 55.5
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 2.8e-112 409.8 468 54.5
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 8.1e-112 408.3 468 53.8
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 1.4e-111 407.5 468 53.8
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 6.9e-111 405.2 469 53.7
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 1.5e-110 404.1 473 51.8
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 2.2e-109 400.2 473 51.0
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 8.4e-109 398.3 454 52.6
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 1.1e-108 397.9 491 51.9
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 6.0e-107 392.1 472 52.8
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 6.0e-107 392.1 468 52.8
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 3.9e-106 389.4 470 51.3
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 2.1e-104 383.6 472 51.9
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 6.2e-104 382.1 468 51.3
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 6.2e-104 382.1 477 49.9
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 1.4e-103 380.9 497 50.3
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 3.4e-102 376.3 467 51.4
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 1.4e-100 370.9 475 48.4
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 1.6e-99 367.5 469 50.5
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 6.0e-99 365.5 490 49.8
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 1.1e-97 361.3 473 49.3
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 1.1e-97 361.3 472 51.1
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 3.3e-97 359.8 469 49.7
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 1.3e-96 357.8 469 49.3
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 1.6e-96 357.5 480 50.2
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 1.6e-96 357.5 490 49.0
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 4.8e-96 355.9 490 49.2
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 1.4e-95 354.4 472 50.4
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 1.4e-95 354.4 468 49.4
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 5.3e-95 352.4 469 50.7
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 5.3e-95 352.4 490 49.0
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 9.0e-95 351.7 490 48.8
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 2.0e-94 350.5 487 47.8
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 4.5e-94 349.4 470 50.0
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 2.9e-93 346.7 474 48.1
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 2.5e-92 343.6 489 46.6
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 1.2e-91 341.3 496 49.0
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 3.0e-90 336.7 469 48.2
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 6.7e-90 335.5 473 46.7
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 1.9e-89 334.0 470 47.9
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 5.7e-89 332.4 470 47.9
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 3.7e-88 329.7 470 47.7
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 2.0e-86 323.9 488 47.3
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 1.7e-85 320.9 491 46.8
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 1.4e-84 317.8 488 44.9
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 4.2e-84 316.2 522 43.1
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 3.6e-83 313.2 485 46.2
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 1.9e-81 307.4 470 48.3
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 1.4e-79 301.2 489 43.4
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 1.7e-77 294.3 470 45.5
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 2.2e-77 293.9 541 40.3
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 1.1e-76 291.6 478 44.4
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 2.7e-75 287.0 482 43.2
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 3.0e-74 283.5 477 42.3
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 6.7e-74 282.3 504 42.3
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 7.4e-73 278.9 524 43.5
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 2.8e-72 276.9 350 50.3
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 2.8e-72 276.9 525 43.0
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 4.8e-72 276.2 502 43.2
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 2.6e-70 270.4 477 41.3
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 3.4e-70 270.0 478 42.5
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 9.4e-68 261.9 475 41.5
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 3.6e-67 260.0 452 42.9
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 1.8e-66 257.7 316 52.8
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 7.4e-65 252.3 474 41.6
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 2.8e-64 250.4 488 41.8
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 3.7e-64 250.0 506 39.5
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 4.8e-64 249.6 431 40.8
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 1.4e-63 248.1 475 41.1
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 1.2e-62 245.0 506 39.7
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 4.5e-62 243.0 472 39.8
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 1.5e-60 238.0 500 38.8
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 1.6e-59 234.6 460 40.4
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 3.6e-59 233.4 461 40.3
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 4.0e-58 229.9 468 39.5
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 7.5e-57 225.7 473 40.0
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 8.2e-56 222.2 460 40.9
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 1.4e-55 221.5 457 38.1
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 2.7e-54 217.2 468 38.2
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 1.0e-53 215.3 468 38.7
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 4.7e-51 206.5 492 36.0
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 6.1e-51 206.1 473 34.7
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 4.0e-50 203.4 468 36.5
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 5.2e-50 203.0 468 36.5
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 1.7e-48 198.0 474 36.1
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 4.8e-48 196.4 474 36.9
ATR0693G210 Amborella trichopoda HOM05D006426 ORTHO05D007737 1.6e-46 191.4 527 35.7
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 1.1e-44 185.3 496 34.9
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 1.6e-35 154.8 460 33.9
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 4.7e-35 153.3 383 36.0
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 2.3e-34 151.0 497 33.0
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 4.0e-34 150.2 460 33.7
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 3.7e-32 143.7 401 32.4
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 4.9e-32 143.3 464 32.8
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 8.3e-32 142.5 456 31.6
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 5.4e-31 139.8 500 30.0
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 1.3e-29 135.2 344 35.8
Lj1P736T39 Lonicera japonica HOM05D006426 ORTHO05D007737 2.1e-27 127.9 184 45.7
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 1.8e-26 124.8 377 36.3
GSVIVG01030006001 Vitis vinifera HOM05D006426 ORTHO05D007737 4.0e-26 123.6 167 46.7
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 3.3e-20 104.0 483 29.0
FvH4_6g44594 Fragaria vesca HOM05D006426 ORTHO05D007737 9.5e-20 102.4 172 44.2
unitig_62.g23190 Utricularia gibba HOM05D006426 ORTHO05D007737 4.7e-19 100.1 165 44.8
HPP92_011117 Vanilla planifolia HOM05D006426 ORTHO05D007737 3.1e-18 97.4 461 28.9
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 6.8e-18 96.3 210 41.4
Oeu029930.1 Olea europaea HOM05D006426 ORTHO05D007737 4.4e-17 93.6 141 41.8
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 9.9e-17 92.4 393 32.3
Oeu035359.1 Olea europaea HOM05D006426 ORTHO05D007737 8.3e-16 89.4 141 41.1
HPP92_011122 Vanilla planifolia HOM05D006426 ORTHO05D007737 8.3e-16 89.4 471 27.2
Oeu003230.1 Olea europaea HOM05D006426 ORTHO05D007737 2.7e-14 84.3 141 40.4
SabraUnG0004200 Salix brachista HOM05D006426 ORTHO05D007737 2.5e-12 77.8 85 50.6
Zm00001eb273600 Zea mays HOM05D032587 ORTHO05D037111 8.9e-10 69.3 261 27.2
Atru.chr6.3075 Acer truncatum HOM05D006426 ORTHO05D007737 2.0e-09 68.2 65 58.5
Os06g0683900 Oryza sativa ssp. japonica HOM05D032587 ORTHO05D037111 7.1e-07 59.7 198 30.3
SGA_v2.0_scaffold51G18895 Striga asiatica HOM05D001803 ORTHO05D001686 9.2e-07 59.3 146 38.4


User provided reference genes

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