Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03859 Nelumbo nucifera HOM05D004655 ORTHO05D005567 7.7e-161 570.5 298 100.0
TAR629G1482 Trochodendron aralioides HOM05D004655 ORTHO05D005567 6.8e-125 451.1 298 79.2
Duzib132G0437 Durio zibethinus HOM05D004655 ORTHO05D005567 1.2e-121 440.3 300 76.0
Duzib132G0466 Durio zibethinus HOM05D004655 ORTHO05D005567 3.5e-121 438.7 300 75.7
Gorai.012G132100 Gossypium raimondii HOM05D004655 ORTHO05D005567 5.1e-120 434.9 300 74.7
COL.COLO4_13659 Corchorus olitorius HOM05D004655 ORTHO05D005567 6.6e-120 434.5 301 75.1
Gohir.D04G146200 Gossypium hirsutum HOM05D004655 ORTHO05D005567 1.5e-119 433.3 300 74.3
Gohir.A04G106100 Gossypium hirsutum HOM05D004655 ORTHO05D005567 2.5e-119 432.6 300 74.3
QL08p036998 Quercus lobata HOM05D004655 ORTHO05D005567 2.5e-119 432.6 298 74.2
Thecc.02G170400 Theobroma cacao HOM05D004655 ORTHO05D005567 3.3e-119 432.2 300 74.7
Actinidia12466 Actinidia chinensis HOM05D004655 ORTHO05D005567 4.3e-119 431.8 297 75.1
CSS0017466 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 4.3e-119 431.8 295 76.9
MBI18_g27693_MAGBIO Magnolia biondii HOM05D004655 ORTHO05D005567 8.1e-118 427.6 297 75.8
Ciclev10016098m.g Citrus clementina HOM05D004655 ORTHO05D005567 1.8e-117 426.4 301 74.1
MELO3C018772.2 Cucumis melo HOM05D004655 ORTHO05D005567 2.4e-117 426.0 293 75.1
TAR627G0814 Trochodendron aralioides HOM05D004655 ORTHO05D005567 4.0e-117 425.2 292 77.1
vmacro12257 Vaccinium macrocarpon HOM05D004655 ORTHO05D005567 4.0e-117 425.2 297 74.7
Atru.chr6.3084 Acer truncatum HOM05D004655 ORTHO05D005567 6.8e-117 424.5 297 74.7
Dinv13829 Davidia involucrata HOM05D004655 ORTHO05D005567 6.8e-117 424.5 293 75.4
Nn1g06795 Nelumbo nucifera HOM05D004655 ORTHO05D005567 6.8e-117 424.5 275 81.1
Nn1g06798 Nelumbo nucifera HOM05D004655 ORTHO05D005567 6.8e-117 424.5 275 81.1
TWI75G0473 Tripterygium wilfordii HOM05D004655 ORTHO05D005567 9.9e-116 420.6 298 72.5
CsaV3_7G004070 Cucumis sativus L. HOM05D004655 ORTHO05D005567 1.3e-115 420.2 293 74.1
Manes.13G152400 Manihot esculenta HOM05D004655 ORTHO05D005567 1.7e-115 419.9 296 74.0
Actinidia18535 Actinidia chinensis HOM05D004655 ORTHO05D005567 2.2e-115 419.5 295 73.9
CiPaw.04G122300 Carya illinoinensis HOM05D004655 ORTHO05D005567 6.4e-115 417.9 297 72.1
TWI36G0222 Tripterygium wilfordii HOM05D004655 ORTHO05D005567 1.1e-114 417.2 298 72.5
ClCG00G002920 Citrullus lanatus HOM05D004655 ORTHO05D005567 1.4e-114 416.8 293 73.4
ClCG02G001360 Citrullus lanatus HOM05D004655 ORTHO05D005567 1.4e-114 416.8 293 73.4
Sed0025834 Sechium edule HOM05D004655 ORTHO05D005567 1.4e-114 416.8 293 73.4
MD17G1085500 Malus domestica HOM05D004655 ORTHO05D005567 2.4e-114 416.0 299 71.2
PGR042G1100 Punica granatum HOM05D004655 ORTHO05D005567 4.6e-113 411.8 300 70.7
RcHm_v2.0_Chr2g0161411 Rosa chinensis HOM05D004655 ORTHO05D005567 2.3e-112 409.5 297 73.7
Eucgr.A01774 Eucalyptus grandis HOM05D004655 ORTHO05D005567 3.0e-112 409.1 309 69.9
VMungo1080G0396 Vigna mungo HOM05D004655 ORTHO05D005567 5.1e-112 408.3 293 72.0
FAN14G2207 Fragaria x ananassa HOM05D004655 ORTHO05D005567 8.7e-112 407.5 297 72.7
CSS0004933 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 1.1e-111 407.1 297 73.1
CANSAT64G1156 Cannabis sativa HOM05D004655 ORTHO05D005567 1.5e-111 406.8 298 69.5
CSS0020863 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 1.9e-111 406.4 296 73.0
CiPaw.03G168300 Carya illinoinensis HOM05D004655 ORTHO05D005567 2.5e-111 406.0 294 70.7
Lj3g0017119 Lotus japonicus HOM05D004655 ORTHO05D005567 2.5e-111 406.0 292 71.6
FvH4_6g44420 Fragaria vesca HOM05D004655 ORTHO05D005567 4.3e-111 405.2 297 72.4
Glyma.12G200200 Glycine max HOM05D004655 ORTHO05D005567 5.6e-111 404.8 293 72.0
MD09G1097200 Malus domestica HOM05D004655 ORTHO05D005567 5.6e-111 404.8 293 71.3
PSO675G0243 Papaver somniferum HOM05D004655 ORTHO05D005567 9.6e-111 404.1 298 71.1
Lj3g0013026 Lotus japonicus HOM05D004655 ORTHO05D005567 2.1e-110 402.9 292 72.6
Psat7g149680 Pisum sativum HOM05D004655 ORTHO05D005567 2.1e-110 402.9 289 74.4
Phvul.005G108600 Phaseolus vulgaris HOM05D004655 ORTHO05D005567 3.6e-110 402.1 293 73.0
Cfa014528 Carpinus fangiana HOM05D004655 ORTHO05D005567 4.8e-110 401.7 295 70.8
FAN02G3511 Fragaria x ananassa HOM05D004655 ORTHO05D005567 6.2e-110 401.4 298 72.5
FAN05G4368 Fragaria x ananassa HOM05D004655 ORTHO05D005567 6.2e-110 401.4 298 72.5
Glyma.13G302100 Glycine max HOM05D004655 ORTHO05D005567 1.1e-109 400.6 293 71.3
FAN02G1121 Fragaria x ananassa HOM05D004655 ORTHO05D005567 1.4e-109 400.2 298 71.8
Medtr4g045980 Medicago truncatula HOM05D004655 ORTHO05D005567 2.4e-109 399.4 299 71.6
Rhsim06G0153100 Rhododendron simsii HOM05D004655 ORTHO05D005567 2.4e-109 399.4 325 66.5
arahy.Tifrunner.gnm1.ann1.YR7HYJ Arachis hypogaea HOM05D004655 ORTHO05D005567 6.9e-109 397.9 302 71.2
DCAR_012973 Daucus carota HOM05D004655 ORTHO05D005567 6.9e-109 397.9 297 69.7
Potri.013G148400 Populus trichocarpa HOM05D004655 ORTHO05D005567 6.9e-109 397.9 301 71.4
GSVIVG01029990001 Vitis vinifera HOM05D004655 ORTHO05D005567 6.9e-109 397.9 239 81.6
ATR0693G119 Amborella trichopoda HOM05D004655 ORTHO05D005567 9.0e-109 397.5 303 69.3
arahy.Tifrunner.gnm1.ann1.81TW8H Arachis hypogaea HOM05D004655 ORTHO05D005567 9.0e-109 397.5 297 71.0
Glyma.12G106600 Glycine max HOM05D004655 ORTHO05D005567 9.0e-109 397.5 285 73.3
Ah.01g005210 Amaranthus hybridus HOM05D004655 ORTHO05D005567 1.2e-108 397.1 293 69.3
arahy.Tifrunner.gnm1.ann1.S2JPPU Arachis hypogaea HOM05D004655 ORTHO05D005567 1.5e-108 396.7 297 70.7
arahy.Tifrunner.gnm1.ann1.XZ54ZU Arachis hypogaea HOM05D004655 ORTHO05D005567 2.0e-108 396.4 302 70.5
Hma1.2p1_0565F.1_g179650 Hydrangea macrophylla HOM05D004655 ORTHO05D005567 2.0e-108 396.4 300 71.7
Lalb_Chr01g0005451 Lupinus albus HOM05D004655 ORTHO05D005567 2.0e-108 396.4 299 69.9
PSO541G1277 Papaver somniferum HOM05D004655 ORTHO05D005567 2.0e-108 396.4 294 70.7
Prupe.3G228700 Prunus persica HOM05D004655 ORTHO05D005567 2.0e-108 396.4 288 70.8
Sopen07g028730 Solanum pennellii HOM05D004655 ORTHO05D005567 3.4e-108 395.6 298 65.8
PGSC0003DMG400018330 Solanum tuberosum HOM05D004655 ORTHO05D005567 3.4e-108 395.6 298 66.1
MSTRG.14176 Avicennia marina HOM05D004655 ORTHO05D005567 4.4e-108 395.2 300 70.3
EL10Ac9g20731 Beta vulgaris HOM05D004655 ORTHO05D005567 5.8e-108 394.8 289 71.3
AUR62037119 Chenopodium quinoa HOM05D004655 ORTHO05D005567 5.8e-108 394.8 292 71.6
Hma1.2p1_0662F.1_g198360 Hydrangea macrophylla HOM05D004655 ORTHO05D005567 5.8e-108 394.8 292 72.6
Lalb_Chr22g0356311 Lupinus albus HOM05D004655 ORTHO05D005567 7.6e-108 394.4 286 72.0
Potri.019G117900 Populus trichocarpa HOM05D004655 ORTHO05D005567 7.6e-108 394.4 301 69.1
TPR.G21652 Trifolium pratense HOM05D004655 ORTHO05D005567 2.2e-107 392.9 275 73.5
Cc05_g06070 Coffea canephora HOM05D004655 ORTHO05D005567 2.9e-107 392.5 306 69.6
Lj1C737G5 Lonicera japonica HOM05D004655 ORTHO05D005567 2.9e-107 392.5 337 65.0
Migut.H01014 Erythranthe guttata HOM05D004655 ORTHO05D005567 3.8e-107 392.1 296 68.9
Ca_01544_v3 Cicer arietinum L. HOM05D004655 ORTHO05D005567 1.1e-106 390.6 292 69.9
THA.LOC104804073 Tarenaya hassleriana HOM05D004655 ORTHO05D005567 1.1e-106 390.6 295 68.8
TPR.G18073 Trifolium pratense HOM05D004655 ORTHO05D005567 1.4e-106 390.2 296 69.9
Haze_13070 Corylus avellana HOM05D004655 ORTHO05D005567 9.3e-106 387.5 355 60.8
BcaB08g34948 Brassica carinata HOM05D004655 ORTHO05D005567 1.2e-105 387.1 293 69.6
Medtr2g089795 Medicago truncatula HOM05D004655 ORTHO05D005567 2.1e-105 386.3 287 70.4
Sp3g34160 Schrenkiella parvula HOM05D004655 ORTHO05D005567 2.7e-105 386.0 295 68.5
A09p58650 Brassica napus HOM05D004655 ORTHO05D005567 4.6e-105 385.2 292 68.8
BraA09t41251Z Brassica rapa HOM05D004655 ORTHO05D005567 4.6e-105 385.2 292 68.8
AUR62032763 Chenopodium quinoa HOM05D004655 ORTHO05D005567 4.6e-105 385.2 289 70.9
VMungo1127G2245 Vigna mungo HOM05D004655 ORTHO05D005567 6.0e-105 384.8 284 72.5
C08p41940 Brassica napus HOM05D004655 ORTHO05D005567 1.7e-104 383.3 292 68.5
Glyma.06G299100 Glycine max HOM05D004655 ORTHO05D005567 1.7e-104 383.3 284 71.5
Aa31LG8G17800 Aethionema arabicum HOM05D004655 ORTHO05D005567 5.1e-104 381.7 297 68.4
BcaC07g41186 Brassica carinata HOM05D004655 ORTHO05D005567 8.7e-104 380.9 292 67.8
BolC8t51757H Brassica oleracea HOM05D004655 ORTHO05D005567 8.7e-104 380.9 292 67.8
Sc12g0002690 Simmondsia chinensis HOM05D004655 ORTHO05D005567 8.7e-104 380.9 290 68.6
CARHR111640 Cardamine hirsuta HOM05D004655 ORTHO05D005567 2.5e-103 379.4 293 67.6
Psat5g269080 Pisum sativum HOM05D004655 ORTHO05D005567 3.3e-103 379.0 275 70.9
Thhalv10002049m.g Eutrema salsugineum HOM05D004655 ORTHO05D005567 7.4e-103 377.9 293 68.3
HanXRQChr06g0171121 Helianthus annuus HOM05D004655 ORTHO05D005567 9.6e-103 377.5 300 68.7
Carub.0003s3556 Capsella rubella HOM05D004655 ORTHO05D005567 1.6e-102 376.7 294 68.4
Phvul.011G110700 Phaseolus vulgaris HOM05D004655 ORTHO05D005567 6.2e-102 374.8 284 71.1
AL3G54160 Arabidopsis lyrata HOM05D004655 ORTHO05D005567 1.1e-101 374.0 293 66.2
Ca_20707_v3 Cicer arietinum L. HOM05D004655 ORTHO05D005567 1.8e-101 373.2 301 66.4
AT2G20890 Arabidopsis thaliana HOM05D004655 ORTHO05D005567 3.1e-101 372.5 294 66.7
Aqoxy1G03905 Aquilegia oxysepala HOM05D004655 ORTHO05D005567 2.6e-100 369.4 295 66.1
Sabra19G0118300 Salix brachista HOM05D004655 ORTHO05D005567 2.6e-100 369.4 349 59.3
Sabra19G0135300 Salix brachista HOM05D004655 ORTHO05D005567 7.6e-100 367.9 349 59.3
HPP92_012362 Vanilla planifolia HOM05D004655 ORTHO05D005567 2.9e-99 365.9 296 69.6
Lsat_1_v5_gn_3_40720 Lactuca sativa HOM05D004655 ORTHO05D005567 6.4e-99 364.8 311 63.7
DCAR_019200 Daucus carota HOM05D004655 ORTHO05D005567 8.4e-99 364.4 231 78.8
unitig_21.g20001 Utricularia gibba HOM05D004655 ORTHO05D005567 1.1e-98 364.0 294 64.6
Os07g0558500 Oryza sativa ssp. japonica HOM05D004655 ORTHO05D005567 7.9e-97 357.8 292 65.1
SGA_v2.0_scaffold34G13911 Striga asiatica HOM05D004655 ORTHO05D005567 7.9e-97 357.8 349 58.7
Duzib052G1220 Durio zibethinus HOM05D004655 ORTHO05D005567 1.3e-96 357.1 295 67.1
Zm00001eb324100 Zea mays HOM05D004655 ORTHO05D005567 6.7e-96 354.8 292 64.0
SalBow1G2826 Salvia bowleyana HOM05D004655 ORTHO05D005567 1.1e-95 354.0 229 76.0
ECA246G4617 Erigeron canadensis HOM05D004655 ORTHO05D005567 7.4e-95 351.3 298 63.4
SGA_v2.0_scaffold70G23458 Striga asiatica HOM05D004655 ORTHO05D005567 2.1e-94 349.7 270 67.8
CAN.G508.2 Capsicum annuum HOM05D004655 ORTHO05D005567 2.8e-94 349.4 226 73.9
SalBow7G2858 Salvia bowleyana HOM05D004655 ORTHO05D005567 4.0e-93 345.5 267 67.4
Peaxi162Scf00007g02516 Petunia axillaris HOM05D004655 ORTHO05D005567 1.5e-92 343.6 331 56.8
Nitab4.5_0000769g0070 Nicotiana tabacum HOM05D004655 ORTHO05D005567 2.2e-91 339.7 296 59.8
Sabra13G0119700 Salix brachista HOM05D004655 ORTHO05D005567 3.2e-90 335.9 300 63.3
Lj8C118T0 Lonicera japonica HOM05D004655 ORTHO05D005567 1.3e-88 330.5 231 74.0
Duzib248G0290 Durio zibethinus HOM05D004655 ORTHO05D005567 1.5e-87 327.0 203 80.8
Nitab4.5_0001019g0090 Nicotiana tabacum HOM05D004655 ORTHO05D005567 2.6e-84 316.2 219 70.8
FAN09G1462 Fragaria x ananassa HOM05D004655 ORTHO05D005567 1.0e-83 314.3 298 60.7
Pp3c19_17570 Physcomitrium patens HOM05D004655 ORTHO05D005567 2.1e-81 306.6 243 62.1
Mapoly0010s0156 Marchantia polymorpha HOM05D004655 ORTHO05D005567 4.6e-81 305.4 289 58.1
Ah.01g014420 Amaranthus hybridus HOM05D004655 ORTHO05D005567 7.9e-81 304.7 230 69.1
Pp3c21_14540 Physcomitrium patens HOM05D004655 ORTHO05D005567 1.5e-79 300.4 241 61.8
AagrBONN_evm.TU.Sc2ySwM_344.251 Anthoceros agrestis HOM05D004655 ORTHO05D005567 3.3e-79 299.3 212 68.9
SMO266G0053 Selaginella moellendorffii HOM05D004655 ORTHO05D005567 8.2e-78 294.7 201 70.6
Sc12g0003940 Simmondsia chinensis HOM05D004655 ORTHO05D005567 9.0e-77 291.2 232 65.5
Zm00001eb106830 Zea mays HOM05D004655 ORTHO05D005567 9.0e-77 291.2 187 78.1
AUR62037125 Chenopodium quinoa HOM05D001718 ORTHO05D008006 1.1e-74 284.3 265 60.4
AUR62032764 Chenopodium quinoa HOM05D001718 ORTHO05D008006 4.6e-73 278.9 265 58.1
Dinv15502 Davidia involucrata HOM05D004655 ORTHO05D005567 3.4e-68 262.7 186 73.1
Cpa.g.sc34.80 Carica papaya HOM05D004655 ORTHO05D005567 1.1e-63 247.7 192 68.2
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 4.7e-57 225.7 218 51.8
CBR_g78876 Chara braunii HOM05D004655 ORTHO05D005567 4.0e-56 222.6 229 49.8
CDE05G0433 Ceratophyllum demersum HOM05D004655 ORTHO05D005567 3.1e-53 213.0 181 61.9
Cre13.g562850 Chlamydomonas reinhardtii HOM05D004655 ORTHO05D005567 8.0e-49 198.4 222 48.6
CDE05G0437 Ceratophyllum demersum HOM05D004655 ORTHO05D005567 1.4e-48 197.6 151 65.6
SEGI_32441 Sequoiadendron giganteum HOM05D004655 ORTHO05D005567 4.7e-41 172.6 161 58.4
MCO07G428 Micromonas commoda HOM05D004655 ORTHO05D005567 8.0e-41 171.8 257 40.5
Cpa.g.sc34.79 Carica papaya HOM05D004655 ORTHO05D005567 1.8e-24 117.5 70 85.7
Sed0002097 Sechium edule HOM05D004655 ORTHO05D005567 5.8e-23 112.5 157 45.2
VMungo0720G1089 Vigna mungo HOM05D004655 ORTHO05D005567 6.4e-22 109.0 59 91.5
ClCG02G001370 Citrullus lanatus HOM05D004655 ORTHO05D005567 3.5e-20 103.2 64 82.8
Sabra19G0118700 Salix brachista HOM05D004655 ORTHO05D005567 7.5e-15 85.5 121 45.5
Oeu029438.1 Olea europaea HOM05D004655 ORTHO05D005567 5.1e-11 72.8 43 72.1
Hma1.2p1_0479F.1_g161430 Hydrangea macrophylla HOM05D001315 ORTHO05D001618 8.6e-11 72.0 56 66.1


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