Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 4.4e-169 597.8 288 100.0
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 1.2e-139 500.0 288 83.0
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 2.0e-137 492.7 285 81.4
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 7.5e-137 490.7 285 81.1
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 9.8e-137 490.3 273 85.0
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 1.4e-135 486.5 285 81.4
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 6.0e-134 481.1 285 80.7
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 7.8e-134 480.7 285 80.7
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 7.8e-134 480.7 285 79.6
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 3.9e-133 478.4 285 79.3
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 6.6e-133 477.6 285 77.5
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 4.3e-132 474.9 274 82.8
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 1.6e-131 473.0 285 78.2
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 1.6e-131 473.0 285 80.0
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 8.1e-131 470.7 281 80.4
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 5.2e-130 468.0 285 77.5
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 1.2e-129 466.8 285 77.5
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 2.6e-129 465.7 279 78.9
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 4.4e-129 464.9 285 76.8
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 7.5e-129 464.2 285 77.9
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 4.9e-128 461.5 293 74.7
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 6.4e-128 461.1 279 77.8
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 1.9e-127 459.5 285 75.1
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 1.9e-127 459.5 285 77.2
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 2.4e-127 459.1 282 76.2
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 2.4e-127 459.1 279 76.3
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 4.1e-127 458.4 282 76.2
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 5.4e-127 458.0 285 75.1
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 1.2e-126 456.8 286 75.5
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.6e-126 456.4 285 76.8
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.6e-126 456.4 285 76.8
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 2.7e-126 455.7 282 76.6
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 2.7e-126 455.7 285 76.5
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 2.7e-126 455.7 282 75.9
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 2.7e-126 455.7 279 75.6
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 4.6e-126 454.9 285 74.0
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 2.3e-125 452.6 286 73.8
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 8.6e-125 450.7 283 74.2
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 8.6e-125 450.7 282 76.2
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 1.1e-124 450.3 283 76.0
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 1.5e-124 449.9 285 74.7
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 1.9e-124 449.5 286 73.4
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 3.3e-124 448.7 325 68.3
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 7.3e-124 447.6 276 76.4
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 9.5e-124 447.2 276 75.0
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 1.6e-123 446.4 279 74.6
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 1.6e-123 446.4 271 77.5
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 1.6e-123 446.4 283 74.2
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 2.1e-123 446.0 279 74.9
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 4.7e-123 444.9 283 74.6
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 6.2e-123 444.5 309 69.3
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 8.1e-123 444.1 287 72.5
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 8.1e-123 444.1 279 73.8
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 8.1e-123 444.1 285 73.7
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 1.8e-122 443.0 277 73.6
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 4.0e-122 441.8 285 71.2
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 4.0e-122 441.8 285 73.3
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 2.0e-121 439.5 285 71.9
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 2.0e-121 439.5 288 74.0
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 3.4e-121 438.7 282 72.7
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 5.8e-121 438.0 282 72.7
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 7.6e-121 437.6 282 72.7
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 9.9e-121 437.2 283 72.4
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 9.9e-121 437.2 282 74.1
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 1.7e-120 436.4 283 72.1
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 2.2e-120 436.0 282 73.0
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 2.2e-120 436.0 280 72.5
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 3.7e-120 435.3 282 72.7
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 4.9e-120 434.9 282 72.3
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 4.9e-120 434.9 285 70.5
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 5.4e-119 431.4 275 73.1
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 5.4e-119 431.4 275 73.1
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 5.4e-119 431.4 283 71.7
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 1.2e-118 430.3 286 72.0
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 1.2e-118 430.3 286 72.0
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 1.2e-118 430.3 269 74.3
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 1.2e-118 430.3 285 70.5
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 3.5e-118 428.7 273 72.2
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 7.8e-118 427.6 271 72.3
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 1.7e-117 426.4 268 74.3
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 2.3e-117 426.0 283 71.0
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 3.9e-117 425.2 277 71.8
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 5.1e-117 424.9 278 70.1
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 5.1e-117 424.9 285 69.8
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 4.3e-116 421.8 278 69.8
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 5.6e-116 421.4 280 71.8
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 6.2e-115 417.9 280 68.2
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 2.4e-114 416.0 257 74.3
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 4.0e-114 415.2 272 69.5
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 1.1e-111 407.1 278 68.0
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 3.9e-109 398.7 261 72.8
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 8.7e-109 397.5 266 72.6
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 1.3e-104 383.6 239 77.0
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 1.3e-104 383.6 275 67.3
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 1.3e-104 383.6 241 75.5
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 2.1e-102 376.3 246 71.5
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 3.5e-102 375.6 285 64.9
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.3e-88 330.5 211 73.9
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 6.5e-88 328.2 267 59.9
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 2.5e-87 326.2 177 84.2
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 1.1e-79 300.8 264 51.5
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 6.3e-75 285.0 260 51.5
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 1.6e-70 270.4 253 49.0
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 1.6e-70 270.4 247 52.2
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.2e-67 260.0 152 84.9
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 7.7e-49 198.4 247 40.9
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 9.4e-47 191.4 105 81.9
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 9.1e-42 174.9 96 82.3
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.0e-40 171.4 104 76.9
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.9e-40 169.9 92 87.0
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 2.9e-40 169.9 147 60.5
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 4.9e-35 152.5 296 37.5
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 1.8e-34 150.6 94 71.3
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 2.5e-31 140.2 75 85.3
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.1e-23 114.8 75 69.3
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 2.8e-22 110.2 67 76.1
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 8.0e-22 108.6 66 77.3
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 5.2e-13 79.3 41 80.5
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 5.1e-08 62.8 48 66.7


User provided reference genes

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